PDB: 2055 件ウェブページステータス検索Chemie searchBIRD

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2ARL	The 2.0 angstroms crystal structure of a pocilloporin at pH 3.5: the structural basis for the linkage between color transition and halide binding 分子名称: ACETIC ACID, CHLORIDE ION, GFP-like non-fluorescent chromoprotein, ... 著者 Wilmann, P.G, Battad, J, Beddoe, T, Olsen, S, Smith, S.C, Dove, S, Devenish, R.J, Rossjohn, J, Prescott, M. 登録日 2005-08-19 公開日 2006-09-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The 2.0 angstroms crystal structure of a pocilloporin at pH 3.5: the structural basis for the linkage between color transition and halide binding Photochem.Photobiol., 82, 2006
2AR3	E90A mutant structure of PlyL 分子名称: PHOSPHATE ION, ZINC ION, prophage lambdaba02, ... 著者 Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C. 登録日 2005-08-19 公開日 2006-06-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure and lytic activity of a Bacillus anthracis prophage endolysin. J.Biol.Chem., 280, 2005
2AWM	GFP R96A chromophore maturation recovery mutant R96A Q183R 分子名称: MAGNESIUM ION, green fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
2AWK	GFP R96M mature chromophore 分子名称: MAGNESIUM ION, green fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
2AWJ	GFP R96M pre-cyclized intermediate in chromophore formation 分子名称: MAGNESIUM ION, green-fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
2AWL	Mature R96K GFP mutant 分子名称: MAGNESIUM ION, green fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
2B3P	Crystal structure of a superfolder green fluorescent protein 分子名称: ACETIC ACID, CADMIUM ION, green fluorescent protein 著者 Pedelacq, J.D, Cabantous, S, Tran, T.H, Terwilliger, T.C, Waldo, G.S. 登録日 2005-09-20 公開日 2005-11-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Engineering and characterization of a superfolder green fluorescent protein. Nat.Biotechnol., 24, 2006
2B3Q	Crystal structure of a well-folded variant of green fluorescent protein 分子名称: MAGNESIUM ION, green fluorescent protein 著者 Pedelacq, J.D, Cabantous, S, Tran, T.H, Terwilliger, T.C, Waldo, G.S. 登録日 2005-09-20 公開日 2005-11-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Engineering and characterization of a superfolder green fluorescent protein. Nat.Biotechnol., 24, 2006
2BBW	Crystal structure of human adenylate kinase 4 (AK4) in complex with diguanosine pentaphosphate 分子名称: DIGUANOSINE-PENTAPHOSPHATE, adenylate kinase 4, AK4 著者 Filippakopoulos, P, Turnbull, A.P, Fedorov, O, Weigelt, J, Bunkoczi, G, Ugochukwu, E, Debreczeni, J, Niesen, F, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2005-10-17 公開日 2005-12-06 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of human adenylate kinase 4 (AK4) in complex with diguanosine pentaphosphate To be Published
2EU8	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R) 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ... 著者 Chen, S, Shamoo, Y. 登録日 2005-10-28 公開日 2006-06-27 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 In vivo molecular evolution reveals biophysical origins of organismal fitness. Mol.Cell, 22, 2006
2C7P	HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine opposite to the target base (GCGC:GMPC) and SAH 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-D(*G*GP*AP*TP*GP*(5CM*2PR)*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*CP*GP*CP*AP*TP*CP*C)-3', ... 著者 Neely, R.K, Daujotyte, D, Grazulis, S, Magennis, S.W, Dryden, D.T.F, Klimasauskas, S, Jones, A.C. 登録日 2005-11-25 公開日 2005-12-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes. Nucleic Acids Res., 33, 2005
2C7O	HhaI DNA methyltransferase complex with 13mer oligonucleotide containing 2-aminopurine adjacent to the target base (PCGC:GMGC) and SAH 分子名称: 5'-D(*T*GP*GP*AP*TP*GP*(5CM)*GP*CP*TP*GP*AP *C)-3', 5'-D(*T*GP*TP*CP*AP*(2PR)*CP*GP*CP*AP*TP*CP *C)-3', MODIFICATION METHYLASE HHAI, ... 著者 Daujotyte, D, Grazulis, S. 登録日 2005-11-25 公開日 2005-12-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes. Nucleic Acids Res., 33, 2005
2C7R	HhaI DNA methyltransferase (T250G mutant) complex with oligonucleotide containing 2-aminopurine as a target base (GPGC:GMGC) and SAH 分子名称: 5'-D(*G*GP*AP*TP*GP*(5CM)*GP*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*(2PR)*GP*CP*AP*TP*CP*C)-3', GLYCEROL, ... 著者 Daujotyte, D, Grazulis, S. 登録日 2005-11-27 公開日 2005-12-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes. Nucleic Acids Res., 33, 2005
2C7Q	HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine outside the recognition sequence (paired with G) and SAH 分子名称: 5'-D(*T*GP*GP*(2PR)*GP*GP*(5CM)*GP*CP*TP*GP* AP*C)-3', 5'-D(*T*GP*TP*CP*AP*GP*CP*GP*CP*CP*GP*CP*C)-3', CITRIC ACID, ... 著者 Daujotyte, D, Grazulis, S. 登録日 2005-11-27 公開日 2005-12-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes Nucleic Acids Res., 33, 2005
2F8A	Crystal structure of the selenocysteine to glycine mutant of human glutathione peroxidase 1 分子名称: Glutathione peroxidase 1, MALONIC ACID 著者 Kavanagh, K.L, Johansson, C, Smee, C, Gileadi, O, von Delft, F, Weigelt, J, Sundstrom, M, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2005-12-02 公開日 2005-12-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of the selenocysteine to glycine mutant of human glutathione peroxidase 1 To be Published
2C9J	Structure of the fluorescent protein cmFP512 at 1.35A from Cerianthus membranaceus 分子名称: GREEN FLUORESCENT PROTEIN FP512 著者 Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U. 登録日 2005-12-12 公開日 2006-10-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Exploring Chromophore-Protein Interactions in Fluorescent Protein Cmfp512 from Cerianthus Membranaceus: X-Ray Structure Analysis and Optical Spectroscopy. Biochemistry, 45, 2006
2C9I	Structure of the fluorescent protein asFP499 from Anemonia sulcata 分子名称: GREEN FLUORESCENT PROTEIN ASFP499 著者 Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U. 登録日 2005-12-12 公開日 2007-01-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein Asfp499 Biophys.J., 91, 2006
2C9Y	Structure of human adenylate kinase 2 分子名称: 1,2-ETHANEDIOL, ADENYLATE KINASE ISOENZYME 2, MITOCHONDRIAL, ... 著者 Bunkoczi, G, Filippakopoulos, P, Debreczeni, J.E, Turnbull, A, Papagrigoriou, E, Savitsky, P, Colebrook, S, von Delft, F, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Knapp, S. 登録日 2005-12-15 公開日 2006-01-04 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of Human Adenylate Kinase 2 To be Published
2FL1	Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution 分子名称: Red fluorescent protein zoanRFP, SULFATE ION 著者 Pletnev, V, Pletneva, N, Martynov, V, Tikhonova, T, Popov, B, Pletnev, S. 登録日 2006-01-05 公開日 2007-01-09 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a red fluorescent protein from Zoanthus, zRFP574, reveals a novel chromophore Acta Crystallogr.,Sect.D, 62, 2006
2DD7	A GFP-like protein from marine copepod, Chiridius poppei 分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, green fluorescent protein 著者 Suto, K, Masuda, H, Takenaka, Y, Mizuno, H. 登録日 2006-01-23 公開日 2007-01-23 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei Genes Cells, 14, 2009
2DD9	A mutant of GFP-like protein from Chiridius poppei 分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, green fluorescent protein 著者 Suto, K, Masuda, H, Takenaka, Y, Mizuno, H. 登録日 2006-01-24 公開日 2007-01-23 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei Genes Cells, 14, 2009
2FWQ	Reduced enolate chromophore intermediate for Y66H GFP variant 分子名称: Green fluorescent protein, MAGNESIUM ION 著者 Barondeau, D.P, Tainer, J.A, Getzoff, E.D. 登録日 2006-02-02 公開日 2006-03-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc., 128, 2006
2FZU	Reduced enolate chromophore intermediate for GFP variant 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION 著者 Barondeau, D.P, Tainer, J.A, Getzoff, E.D. 登録日 2006-02-10 公開日 2006-03-14 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc., 128, 2006
2G16	Structure of S65A Y66S GFP variant after backbone fragmentation 分子名称: Green fluorescent protein 著者 Barondeau, D.P. 登録日 2006-02-13 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G2S	Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis 分子名称: Green fluorescent protein, MAGNESIUM ION 著者 Barondeau, D.P. 登録日 2006-02-16 公開日 2006-04-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006

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