Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XPU
DownloadVisualize
BU of 4xpu by Molmil
The crystal structure of EndoV from E.coli
分子名称: Endonuclease V
著者Xie, W, Zhang, Z.
登録日2015-01-18
公開日2015-08-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of E. coli endonuclease V, an essential enzyme for deamination repair
Sci Rep, 5, 2015
5HTD
DownloadVisualize
BU of 5htd by Molmil
Recombinant bovine beta-lactoglobulin variant L1A/I2S with endogenous ligand (sBlgB#1)
分子名称: Beta-lactoglobulin, MYRISTIC ACID
著者Loch, J.I, Bonarek, P, Tworzydlo, M, Polit, A, Hawro, B, Lach, A, Ludwin, E, Lewinski, K.
登録日2016-01-26
公開日2016-07-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Engineered beta-Lactoglobulin Produced in E. coli: Purification, Biophysical and Structural Characterisation.
Mol Biotechnol., 58, 2016
5HTE
DownloadVisualize
BU of 5hte by Molmil
Recombinant bovine beta-lactoglobulin variant L1A/I2S (sBlgB#2)
分子名称: Beta-lactoglobulin
著者Loch, J.I, Bonarek, P, Tworzydlo, M, Polit, A, Hawro, B, Lach, A, Ludwin, E, Lewinski, K.
登録日2016-01-26
公開日2016-07-20
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Engineered beta-Lactoglobulin Produced in E. coli: Purification, Biophysical and Structural Characterisation.
Mol Biotechnol., 58, 2016
7ZQM
DownloadVisualize
BU of 7zqm by Molmil
d(CGCGCG)2 Z-DNA AT 3000 BARS (300 MPa)
分子名称: MAGNESIUM ION, Z-DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Prange, T, Colloc'h, N, Girard, E.
登録日2022-05-01
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
6HPC
DownloadVisualize
BU of 6hpc by Molmil
Crystal structure of the HicB antitoxin from E. coli
分子名称: Antitoxin HicB
著者Manav, M.C, Brodersen, D.E.
登録日2018-09-20
公開日2019-09-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019
8QQB
DownloadVisualize
BU of 8qqb by Molmil
Crystal structure of protein kinase CK2 catalytic subunit in complex with a Dibromo Dihydro Dibenzofuranone derivative
分子名称: (4~{Z})-7,9-bis(bromanyl)-8-oxidanyl-4-(phenylazanylmethylidene)-1,2-dihydrodibenzofuran-3-one, 1,2-ETHANEDIOL, Casein kinase II subunit alpha, ...
著者Werner, C, Niefind, K, Jose, J.
登録日2023-10-04
公開日2024-10-16
最終更新日2025-01-01
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Discovery of 7,9-Dibromo-dihydrodibenzofuran as a Potent Casein Kinase 2 (CK2) Inhibitor: Synthesis, Biological Evaluation, and Structural Studies on E- / Z -Isomers.
Acs Pharmacol Transl Sci, 7, 2024
7UWH
DownloadVisualize
BU of 7uwh by Molmil
CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex bound to ribonucleotide substrate
分子名称: DNA (59-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Hao, Z.T, Grower, M, Bharati, B, Proshkin, S, Epshtein, V, Svetlov, V, Nudler, E, Shamovsky, I.
登録日2022-05-03
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献RNA polymerase drives ribonucleotide excision DNA repair in E. coli.
Cell, 186, 2023
7UWE
DownloadVisualize
BU of 7uwe by Molmil
CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex
分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Hao, Z.T, Grower, M, Bharati, B, Proshkin, S, Epshtein, V, Svetlov, V, Nudler, E, Shamovsky, I.
登録日2022-05-03
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献RNA polymerase drives ribonucleotide excision DNA repair in E. coli.
Cell, 186, 2023
5U7E
DownloadVisualize
BU of 5u7e by Molmil
Apo dihydroneopterin triphosphate pyrophosphohydrolase from E. coli
分子名称: Dihydroneopterin triphosphate diphosphatase, GLYCEROL, SULFATE ION
著者Nguyen, E, Hill, S.E, Lieberman, R.L.
登録日2016-12-12
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.942 Å)
主引用文献Metal ion coordination in the E. coli Nudix hydrolase dihydroneopterin triphosphate pyrophosphatase: New clues into catalytic mechanism.
PLoS ONE, 12, 2017
4L8M
DownloadVisualize
BU of 4l8m by Molmil
Human p38 MAP kinase in complex with a Dibenzoxepinone
分子名称: Mitogen-activated protein kinase 14, N-[2-fluoro-5-({9-[2-(morpholin-4-yl)ethoxy]-11-oxo-6,11-dihydrodibenzo[b,e]oxepin-3-yl}amino)phenyl]benzamide, octyl beta-D-glucopyranoside
著者Richters, A, Mayer-Wrangowski, S.C, Gruetter, C, Rauh, D.
登録日2013-06-17
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Metabolically Stable Dibenzo[b,e]oxepin-11(6H)-ones as Highly Selective p38 MAP Kinase Inhibitors: Optimizing Anti-Cytokine Activity in Human Whole Blood.
J.Med.Chem., 56, 2013
6HMP
DownloadVisualize
BU of 6hmp by Molmil
Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azoimidazole-based Inhibitor (compound 3)
分子名称: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[5-(4-fluorophenyl)-2-[(~{E})-(4-fluorophenyl)diazenyl]-3-methyl-imidazol-4-yl]pyridin-2-yl]propanamide, Casein kinase I isoform delta, PHOSPHATE ION
著者Pichlo, C, Schehr, M, Charl, J, Brunstein, E, Peifer, C, Baumann, U.
登録日2018-09-12
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.039 Å)
主引用文献2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
5EG0
DownloadVisualize
BU of 5eg0 by Molmil
HOXB13-MEIS1 heterodimer bound to DNA
分子名称: DNA (5'-D(*CP*CP*TP*CP*GP*TP*AP*AP*AP*AP*CP*TP*GP*TP*CP*AP*AP*C)-3'), DNA (5'-D(P*GP*TP*TP*GP*AP*CP*AP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*G)-3'), Homeobox protein Hox-B13, ...
著者Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J.
登録日2015-10-26
公開日2016-11-09
最終更新日2025-04-23
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献DNA-guided transcription factor interactions extend human gene regulatory code.
Nature, 2025
6HMR
DownloadVisualize
BU of 6hmr by Molmil
Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azothiazole-based inhibitor (compound 2)
分子名称: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[4-(4-fluorophenyl)-2-[(~{E})-phenyldiazenyl]-1,3-thiazol-5-yl]pyridin-2-yl]propanamide, Casein kinase I isoform delta, MALONIC ACID
著者Pichlo, C, Schehr, M, Charl, J, Brunstein, E, Peifer, C, Baumann, U.
登録日2018-09-12
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.782 Å)
主引用文献2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
7X7R
DownloadVisualize
BU of 7x7r by Molmil
Cryo-EM structure of a bacterial protein
分子名称: RAMP superfamily protein, RNA (36-MER), RNA (5'-R(P*AP*GP*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3'), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-10
公開日2022-11-16
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7XC7
DownloadVisualize
BU of 7xc7 by Molmil
Cryo-EM structure of a bacterial protein complex
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-23
公開日2022-11-16
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7X8A
DownloadVisualize
BU of 7x8a by Molmil
Cryo-EM structure of a bacterial protein complex
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-11
公開日2022-11-16
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7X7A
DownloadVisualize
BU of 7x7a by Molmil
Cryo-EM structure of SbCas7-11 in complex with crRNA and target RNA
分子名称: RAMP superfamily protein, RNA (33-MER), ZINC ION
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-09
公開日2022-11-16
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
3KXP
DownloadVisualize
BU of 3kxp by Molmil
Crystal Structure of E-2-(Acetamidomethylene)succinate Hydrolase
分子名称: Alpha-(N-acetylaminomethylene)succinic acid hydrolase, CHLORIDE ION
著者McCulloch, K.M, Mukherjee, T, Begley, T.P, Ealick, S.E.
登録日2009-12-03
公開日2010-02-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure determination and characterization of the vitamin B(6) degradative enzyme (E)-2-(acetamidomethylene)succinate hydrolase.
Biochemistry, 49, 2010
1LTB
DownloadVisualize
BU of 1ltb by Molmil
2.6 ANGSTROMS CRYSTAL STRUCTURE OF PARTIALLY-ACTIVATED E. COLI HEAT-LABILE ENTEROTOXIN (LT)
分子名称: HEAT-LABILE ENTEROTOXIN, SUBUNIT A, SUBUNIT B
著者Merritt, E.A, Sixma, T.K, Hol, W.G.J.
登録日1993-09-15
公開日1994-01-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of partially-activated E. coli heat-labile enterotoxin (LT) at 2.6 A resolution.
FEBS Lett., 337, 1994
7BH8
DownloadVisualize
BU of 7bh8 by Molmil
3H4-Fab HLA-E-VL9 co-complex
分子名称: 3H4 Fab heavy chain, 3H4 Fab light chain, Beta-2-microglobulin, ...
著者Walters, L.C, Rozbesky, D.
登録日2021-01-10
公開日2022-04-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mouse and human antibodies bind HLA-E-leader peptide complexes and enhance NK cell cytotoxicity.
Commun Biol, 5, 2022
7YFQ
DownloadVisualize
BU of 7yfq by Molmil
Cryo-EM structure of the EfPiwi (N959K)-piRNA-target ternary complex
分子名称: MAGNESIUM ION, Piwi, RNA (5'-R(*UP*CP*CP*AP*UP*GP*UP*UP*GP*AP*UP*GP*GP*UP*AP*A)-3'), ...
著者Li, Z.Q, Liu, H.B, Wu, J.P, Shen, E.Z.
登録日2022-07-08
公開日2024-02-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mammalian PIWI-piRNA-target complexes reveal features for broad and efficient target silencing.
Nat.Struct.Mol.Biol., 2024
7YFY
DownloadVisualize
BU of 7yfy by Molmil
Cryo-EM structure of the Mili-piRNA- target ternary complex
分子名称: MAGNESIUM ION, Piwi-like protein 2, RNA (5'-R(P*CP*CP*AP*UP*GP*UP*UP*GP*AP*UP*GP*GP*UP*AP*A)-3'), ...
著者Li, Z.Q, Liu, H.B, Wu, J.P, Shen, E.Z.
登録日2022-07-09
公開日2024-01-24
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Mammalian PIWI-piRNA-target complexes reveal features for broad and efficient target silencing.
Nat.Struct.Mol.Biol., 2024
5IFG
DownloadVisualize
BU of 5ifg by Molmil
Crystal structure of HigA-HigB complex from E. Coli
分子名称: Antitoxin HigA, mRNA interferase HigB
著者Yang, J.S, Zhou, K, Gao, z.Q, Liu, Q.S, Dong, Y.H.
登録日2016-02-26
公開日2017-03-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structural insight into the E. coli HigBA complex
Biochem. Biophys. Res. Commun., 478, 2016
8UIY
DownloadVisualize
BU of 8uiy by Molmil
In situ human P-Z state 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Wei, Z, Yong, X.
登録日2023-10-10
公開日2025-04-09
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献In situ human P-Z state 80S ribosome
To Be Published
8UJK
DownloadVisualize
BU of 8ujk by Molmil
In situ HHT and CHX treated A-P-Z state 80S ribosome
分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA, 28S rRNA, ...
著者Wei, Z, Yong, X.
登録日2023-10-11
公開日2025-04-16
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献In situ HHT and CHX treated human A-P-Z state 80S ribosome
To Be Published

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon