Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8RZD
DownloadVisualize
BU of 8rzd by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 9
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-(3-hydroxyphenyl)benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 9
To Be Published
1F85
DownloadVisualize
BU of 1f85 by Molmil
SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE
分子名称: HCV-1B IRES RNA DOMAIN IIIE
著者Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D.
登録日2000-06-28
公開日2000-11-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function.
Nat.Struct.Biol., 7, 2000
8RZE
DownloadVisualize
BU of 8rze by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 10
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-pyridin-3-yl-benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 10
To Be Published
1BSH
DownloadVisualize
BU of 1bsh by Molmil
SOLUTION STRUCTURE OF THE EPSILON SUBUNIT OF THE F1-ATPSYNTHASE FROM ESCHERICHIA COLI AND ORIENTATION OF THE SUBUNIT RELATIVE TO THE BETA SUBUNITS OF THE COMPLEX
分子名称: PROTEIN (EPSILON SUBUNIT)
著者Wilkens, S, Capaldi, R.A.
登録日1998-08-27
公開日1998-09-02
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Solution structure of the epsilon subunit of the F1-ATPase from Escherichia coli and interactions of this subunit with beta subunits in the complex.
J.Biol.Chem., 273, 1998
1WMH
DownloadVisualize
BU of 1wmh by Molmil
Crystal structure of a PB1 domain complex of Protein kinase c iota and Par6 alpha
分子名称: Partitioning defective-6 homolog alpha, Protein kinase C, iota type
著者Hirano, Y, Yoshinaga, S, Suzuki, N.N, Horiuchi, M, Kohjima, M, Takeya, R, Sumimoto, H, Inagaki, F.
登録日2004-07-09
公開日2004-12-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a Cell Polarity Regulator, a Complex between Atypical PKC and Par6 PB1 Domains
J.Biol.Chem., 280, 2005
6BCA
DownloadVisualize
BU of 6bca by Molmil
A Complex between PH Domain of LbcRhoGEF (AKAP-Lbc) and Activated RhoA Bound to a GTP Analog
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, A-kinase anchor protein 13, MAGNESIUM ION, ...
著者Sternweis, P.C, Chen, Z.
登録日2017-10-20
公開日2017-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Crystal structures of the PH domains from Lbc family of RhoGEFs bound to activated RhoA GTPase.
Data Brief, 17, 2018
6UUW
DownloadVisualize
BU of 6uuw by Molmil
Structure of human ATP citrate lyase E599Q mutant in complex with Mg2+, citrate, ATP and CoA
分子名称: (2S)-2-hydroxy-2-[2-oxo-2-(phosphonooxy)ethyl]butanedioic acid, ADENOSINE-5'-DIPHOSPHATE, ATP-citrate synthase, ...
著者Wei, X, Marmorstein, R.
登録日2019-11-01
公開日2019-12-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase
Nat.Struct.Mol.Biol., 27, 2020
5ME6
DownloadVisualize
BU of 5me6 by Molmil
Crystal Structure of eiF4E from C. melo bound to a CAP analog
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Eukaryotic transcription initiation factor 4E
著者Querol-Audi, J, Silva, C, Miras, M, Aranda-Regules, M, Verdaguer, N.
登録日2016-11-14
公開日2017-08-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of eIF4E in Complex with an eIF4G Peptide Supports a Universal Bipartite Binding Mode for Protein Translation.
Plant Physiol., 174, 2017
7BWK
DownloadVisualize
BU of 7bwk by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA-VpdB(461-590) derived from Legionella pneumophila
分子名称: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
著者Kim, H, Kwak, M.J, Oh, B.H.
登録日2020-04-14
公開日2020-06-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structural basis for effector protein recognition by the Dot/Icm Type IVB coupling protein complex.
Nat Commun, 11, 2020
6MJH
DownloadVisualize
BU of 6mjh by Molmil
The S31N mutant of the influenza A M2 proton channel in two distinct conformational states
分子名称: CALCIUM ION, CHLORIDE ION, Matrix protein 2
著者Thomaston, J.L, DeGrado, W.F.
登録日2018-09-20
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献X-ray Crystal Structure of the Influenza A M2 Proton Channel S31N Mutant in Two Conformational States: An Open and Shut Case.
J.Am.Chem.Soc., 141, 2019
6SUR
DownloadVisualize
BU of 6sur by Molmil
The Rab33B-Atg16L1 crystal structure
分子名称: Autophagy-related protein 16-1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Metje-Sprink, J, Kuehnel, K.
登録日2019-09-16
公開日2020-08-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.467 Å)
主引用文献Crystal structure of the Rab33B/Atg16L1 effector complex.
Sci Rep, 10, 2020
8A8F
DownloadVisualize
BU of 8a8f by Molmil
Crystal structure of Glc7 phosphatase in complex with the regulatory region of Ref2
分子名称: MANGANESE (II) ION, PHOSPHATE ION, RNA end formation protein 2, ...
著者Carminati, M, Manav, C.M, Bellini, D, Passmore, L.A.
登録日2022-06-22
公開日2023-11-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A direct interaction between CPF and RNA Pol II links RNA 3' end processing to transcription.
Mol.Cell, 83, 2023
5J5P
DownloadVisualize
BU of 5j5p by Molmil
AMP-PNP-stabilized ATPase domain of topoisomerase IV from Streptococcus pneumoniae, complex type I
分子名称: DNA (5'-D(*GP*CP*GP*CP*GP*C)-3'), DNA topoisomerase 4 subunit B, MAGNESIUM ION, ...
著者Laponogov, I, Pan, X.-S, Skamrova, G, Umrekar, T, Fisher, L.M, Sanderson, M.R.
登録日2016-04-03
公開日2017-07-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Trapping of the transport-segment DNA by the ATPase domains of a type II topoisomerase.
Nat Commun, 9, 2018
1BTM
DownloadVisualize
BU of 1btm by Molmil
TRIOSEPHOSPHATE ISOMERASE (TIM) COMPLEXED WITH 2-PHOSPHOGLYCOLIC ACID
分子名称: 2-PHOSPHOGLYCOLIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Delboni, L.F, Mande, S.C, Hol, W.G.J.
登録日1995-11-11
公開日1996-04-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of recombinant triosephosphate isomerase from Bacillus stearothermophilus. An analysis of potential thermostability factors in six isomerases with known three-dimensional structures points to the importance of hydrophobic interactions.
Protein Sci., 4, 1995
5M76
DownloadVisualize
BU of 5m76 by Molmil
Crystal structure of cardiotoxic Bence-Jones light chain dimer H10
分子名称: BROMIDE ION, light chain dimer
著者Oberti, L, Rognoni, P, Bacarizo, J, Bolognesi, M, Ricagno, S.
登録日2016-10-26
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Concurrent structural and biophysical traits link with immunoglobulin light chains amyloid propensity.
Sci Rep, 7, 2017
6AVU
DownloadVisualize
BU of 6avu by Molmil
Human alpha-V beta-3 Integrin (open conformation) in complex with the therapeutic antibody LM609
分子名称: Fab LM609 heavy chain, Fab LM609 light chain, Integrin alpha-V, ...
著者Borst, A.J, James, Z.N, Zagotta, W.N, Ginsberg, M, Rey, F.A, DiMaio, F, Backovic, M, Veesler, D.
登録日2017-09-04
公開日2017-11-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha V beta 3 Integrin via Steric Hindrance.
Structure, 25, 2017
8G5C
DownloadVisualize
BU of 8g5c by Molmil
Structure of ACLY-D1026A-substrates, local refinement of ASH domain
分子名称: (3S)-citryl-Coenzyme A, ADENOSINE-5'-DIPHOSPHATE, ATP-citrate synthase, ...
著者Xuepeng, W, Ronen, M.
登録日2023-02-12
公開日2023-05-10
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Allosteric role of the citrate synthase homology domain of ATP citrate lyase.
Nat Commun, 14, 2023
7KJH
DownloadVisualize
BU of 7kjh by Molmil
Plasmodium falciparum protein Pf12p bound to nanobody B9
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, Nanobody B9, ...
著者Dietrich, M.H, Tham, W.H.
登録日2020-10-26
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nanobody generation and structural characterization of Plasmodium falciparum 6-cysteine protein Pf12p.
Biochem.J., 478, 2021
5IUX
DownloadVisualize
BU of 5iux by Molmil
GLIC-V135C bimane labelled X-ray structure
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2,3,5,6-tetramethyl-1H,7H-pyrazolo[1,2-a]pyrazole-1,7-dione, ACETATE ION, ...
著者Fourati, Z, Menny, A, Delarue, M.
登録日2016-03-18
公開日2017-03-29
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identification of a pre-active conformation of a pentameric channel receptor.
Elife, 6, 2017
7KMS
DownloadVisualize
BU of 7kms by Molmil
Cryo-EM structure of triple ACE2-bound SARS-CoV-2 trimer spike at pH 7.4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Gorman, J, Kwong, P.D, Shapiro, L.
登録日2020-11-03
公開日2020-12-09
最終更新日2021-12-15
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains.
Cell Host Microbe, 28, 2020
6IYC
DownloadVisualize
BU of 6iyc by Molmil
Recognition of the Amyloid Precursor Protein by Human gamma-secretase
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhou, R, Yang, G, Guo, X, Zhou, Q, Lei, J, Shi, Y.
登録日2018-12-14
公開日2019-01-23
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Recognition of the amyloid precursor protein by human gamma-secretase.
Science, 363, 2019
1FIA
DownloadVisualize
BU of 1fia by Molmil
CRYSTAL STRUCTURE OF THE FACTOR FOR INVERSION STIMULATION FIS AT 2.0 ANGSTROMS RESOLUTION
分子名称: FACTOR FOR INVERSION STIMULATION (FIS)
著者Kostrewa, D, Granzin, J, Choe, H.-W, Labahn, J, Saenger, W.
登録日1991-12-18
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the factor for inversion stimulation FIS at 2.0 A resolution.
J.Mol.Biol., 226, 1992
5J5G
DownloadVisualize
BU of 5j5g by Molmil
X-Ray Crystal Structure of Acetylcholine Binding Protein (AChBP) in Complex with 6-(4-methoxyphenyl)-N4,N4-bis[(pyridin-2-yl)methyl]pyrimidine-2,4-diamine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-(4-methoxyphenyl)-N~4~,N~4~-bis[(pyridin-2-yl)methyl]pyrimidine-2,4-diamine, Acetylcholine-binding protein, ...
著者Kaczanowska, K, Harel, M, Camacho Hernandez, A.G, Taylor, P.
登録日2016-04-02
公開日2017-03-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.036 Å)
主引用文献Substituted 2-Aminopyrimidines Selective for alpha 7-Nicotinic Acetylcholine Receptor Activation and Association with Acetylcholine Binding Proteins.
J. Am. Chem. Soc., 139, 2017
5MCV
DownloadVisualize
BU of 5mcv by Molmil
New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins (complex p53DBD-LWC1)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Cellular tumor antigen p53, ...
著者Golovenko, D, Rozenberg, H, Shakked, Z.
登録日2016-11-10
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins.
Structure, 26, 2018
6MP6
DownloadVisualize
BU of 6mp6 by Molmil
Cryo-EM structure of the human neutral amino acid transporter ASCT2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neutral amino acid transporter B(0)
著者Yu, X, Han, S.
登録日2018-10-05
公開日2019-11-06
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Cryo-EM structures of the human glutamine transporter SLC1A5 (ASCT2) in the outward-facing conformation.
Elife, 8, 2019

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon