PDB: 7404 件ウェブページステータス検索Chemie searchBIRD

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4V66	Structure of the E. coli ribosome and the tRNAs in Post-accommodation state 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Devkota, B, Caulfield, T.R, Tan, R.-Z, Harvey, S.C. 登録日 2008-08-03 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 The Structure of the E. coli Ribosome Before and After Accommodation: Implications for Proofreading To be Published
6IY7	E. coli peptide deformylase crystal structure fitted into the cryo-EM density map of E. coli 70S ribosome in complex with peptide deformylase 分子名称: Peptide deformylase 著者 Sengupta, J, Akbar, S, Bhakta, S. 登録日 2018-12-13 公開日 2019-04-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (10.5 Å) 主引用文献 Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit. J. Mol. Biol., 431, 2019
4LF7	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, MAGNESIUM ION, PAROMOMYCIN, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.1484 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
4LFA	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.6461 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013
4LF9	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, MAGNESIUM ION, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.2811 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013
4LF4	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, MAGNESIUM ION, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.3421 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
4LF5	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.753 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
3J2I	Structure of late pre-60S ribosomal subunits with nuclear export factor Arx1 bound at the peptide exit tunnel 分子名称: Eukaryotic translation initiation factor 6, Proliferation-associated protein 2G4 著者 Bradatsch, B, Leidig, C, Granneman, S, Gnaedig, M, Tollervey, D, Boettcher, B, Beckmann, R, Hurt, E. 登録日 2012-10-04 公開日 2012-11-07 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (11.9 Å) 主引用文献 Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel. Nat.Struct.Mol.Biol., 19, 2012
8G2U	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
4LF8	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, MAGNESIUM ION, PAROMOMYCIN, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.1484 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013
4LF6	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, MAGNESIUM ION, NEOMYCIN, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.3052 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
4LFB	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, MAGNESIUM ION, NEOMYCIN, ... 著者 Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. 登録日 2013-06-26 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (3.009 Å) 主引用文献 Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013
6IZ7	E. coli methionine aminopeptidase crystal structure fitted into the cryo-EM density map of E. coli 70S ribosome in complex with methionine aminopeptidase 分子名称: Methionine aminopeptidase 著者 Sengupta, J, Bhakta, S, Akbar, S. 登録日 2018-12-18 公開日 2019-04-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (11.8 Å) 主引用文献 Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit. J. Mol. Biol., 431, 2019
8CD1	70S-PHIKZ014 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Gerovac, M, Vogel, J. 登録日 2023-01-29 公開日 2024-01-24 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Phage proteins target and co-opt host ribosomes immediately upon infection. Nat Microbiol, 9, 2024
3BBX	The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Jiang, L, Abrahams, J.P. 登録日 2007-11-11 公開日 2008-10-21 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (10 Å) 主引用文献 Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15. J.Mol.Biol., 386, 2009
7M5D	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhang, J. 登録日 2021-03-23 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) To Be Published
2YB5	Structure of the fusidic acid resistance protein FusC 分子名称: 1,2-ETHANEDIOL, PUTATIVE FUSIDIC ACID RESISTANCE PROTEIN, ZINC ION 著者 Cox, G, Edwards, T.A. 登録日 2011-03-01 公開日 2012-01-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Ribosome Clearance by Fusb-Type Proteins Mediates Resistance to the Antibiotic Fusidic Acid Proc.Natl.Acad.Sci.USA, 109, 2012
2ZJQ	Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit 分子名称: 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P. 登録日 2008-03-08 公開日 2008-06-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin. Mol.Cell, 30, 2008
6PPK	RbgA+45SRbgA complex 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Ortega, J. 登録日 2019-07-07 公開日 2019-09-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate. Nucleic Acids Res., 47, 2019
2G1D	Solution Structure of Ribosomal Protein S24E from Thermoplasma acidophilum 分子名称: 30S ribosomal protein S24e 著者 Jeon, B.-Y, Hong, E.-M, Jung, J.-W, Yee, A, Arrowsmith, C.H, Lee, W. 登録日 2006-02-14 公開日 2007-02-14 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of TA1092, a ribosomal protein S24e from Thermoplasma acidophilum Proteins, 64, 2006
6MJ0	Crystal structure of the complete turnip yellow mosaic virus 3'UTR 分子名称: RNA (101-MER) 著者 Hartwick, E.W, Costantino, D.A, MacFadden, A, Nix, J.C, Tian, S, Das, R, Kieft, J.S. 登録日 2018-09-20 公開日 2019-01-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Ribosome-induced RNA conformational changes in a viral 3'-UTR sense and regulate translation levels. Nat Commun, 9, 2018
3J7Y	Structure of the large ribosomal subunit from human mitochondria 分子名称: 16S rRNA, ADENOSINE MONOPHOSPHATE, CRIF1, ... 著者 Brown, A, Amunts, A, Bai, X.C, Sugimoto, Y, Edwards, P.C, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V. 登録日 2014-08-26 公開日 2014-10-15 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of the large ribosomal subunit from human mitochondria. Science, 346, 2014
8CEE	Rnase R bound to a 30S degradation intermediate (State I - head-turning) 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N. 登録日 2023-02-01 公開日 2023-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of ribosomal 30S subunit degradation by RNase R. Nature, 626, 2024
8CEC	Rnase R bound to a 30S degradation intermediate (State I - head-turning) 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N. 登録日 2023-02-01 公開日 2023-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.57 Å) 主引用文献 Structural basis of ribosomal 30S subunit degradation by RNase R. Nature, 626, 2024
8CDU	Rnase R bound to a 30S degradation intermediate (main state) 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N. 登録日 2023-02-01 公開日 2023-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of ribosomal 30S subunit degradation by RNase R. Nature, 626, 2024

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