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2ZZ3
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Covalent complex of orotidine monophosphate decarboxylase D70A mutant from M. thermoautotrophicus with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
333D
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THE CRYSTAL STRUCTURE OF AN RNA OLIGOMER INCORPORATING TANDEM ADENOSINE-INOSINE MISMATCHES
分子名称: CALCIUM ION, RNA (5'-R(*CP*GP*CP*AP*IP*GP*CP*G)-3')
著者Carter, R.J, Baeyens, K.J, SantaLucia Jr, J, Turner, D.H, Holbrook, S.R.
登録日1997-05-20
公開日1997-10-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.
Nucleic Acids Res., 25, 1997
376D
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A ZIPPER-LIKE DNA DUPLEX D(GCGAAAGCT)
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*(CBR)P*GP*AP*AP*AP*GP*CP*T)-3')
著者Cruse, W.B.T, Shepard, W, Prange, T, delalFortelle, E, Fourme, R.
登録日1998-01-22
公開日1999-10-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A zipper-like duplex in DNA: the crystal structure of d(GCGAAAGCT) at 2.1 A resolution.
Structure, 6, 1998
387D
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RNA Pseudoknot with 3D Domain Swapping
分子名称: RNA Pseudoknot
著者Lietzke, S.E, Kundrot, C.E, Barnes, C.L.
登録日1998-04-14
公開日2003-08-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The Structure of an RNA Pseudoknot Shows 3D Domain Swapping
Structure, Motion, Interaction and Expression of Biological Macromolecules, The Proceedings of the Tenth Conversation held at The University-SUNY, Albany NY, June 17-21, 1997, 10, 1998
3A20
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L122K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Shibata, N, Higuchi, Y.
登録日2009-04-27
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis
J.Biochem., 141, 2007
3A3A
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Crystal structure of human selenocystine tRNA
分子名称: selenocysteine tRNA
著者Itoh, Y, Chiba, S, Sekine, S.I, Yokoyama, S.
登録日2009-06-11
公開日2009-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of human selenocysteine tRNA.
Nucleic Acids Res., 37, 2009
316D
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Selectivity of F8-actinomycin D for RNA:DNA hybrids and its anti-leukemia activity
分子名称: 8-FLUORO-ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
著者Takusagawa, F, Takusagawa, K.T, Carlson, R.G, Weaver, R.F.
登録日1997-03-05
公開日1997-11-05
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Selectivity of F8-Actinomycin D for RNA:DNA Hybrids and its Anti-Leukemia Activity.
Bioorg.Med.Chem., 5, 1997
328D
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STRUCTURE OF A D(CGCGAATTCGCG)2-SN7167 COMPLEX
分子名称: 4-[4-[2-AMINO-4-[4,6-(N-METHYLQUINOLINIUM)AMINO]BENZAMIDO]ANILINO]-N-METHYLPYRIDINIUM MESYLATE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Squire, C.J, Clark, G.R, Denny, W.A.
登録日1997-04-15
公開日1997-04-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Minor groove binding of a bis-quaternary ammonium compound: the crystal structure of SN 7167 bound to d(CGCGAATTCGCG)2.
Nucleic Acids Res., 25, 1997
340D
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STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA
分子名称: DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3')
著者Mooers, B.H.M, Eichman, B.F, Ho, P.S.
登録日1997-06-26
公開日1997-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Parameters from Single-Crystal Structures for Accurate Models of A-DNA
To be Published
3A9W
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Crystal structure of L-Threonine bound L-Threonine dehydrogenase (Y137F) from Hyperthermophilic Archaeon Thermoplasma volcanium
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, NDP-sugar epimerase, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2009-11-07
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Binary and Ternary Complexes of Archaeal UDP-galactose 4-Epimerase-like L-Threonine Dehydrogenase from Thermoplasma volcanium.
J.Biol.Chem., 287, 2012
3A5A
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Crystal structure of a hemoglobin component V from Propsilocerus akamusi (pH5.6 coordinates)
分子名称: Hemoglobin V, PROTOPORPHYRIN IX CONTAINING FE
著者Kuwada, T, Hasegawa, T, Takagi, T, Shishikura, F.
登録日2009-08-05
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献pH-dependent structural changes in haemoglobin component V from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera)
Acta Crystallogr.,Sect.D, 66, 2010
330D
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BASE-PAIRING SHIFT IN THE MAJOR GROOVE OF (CA)N TRACTS BY B-DNA CRYSTAL STRUCTURES
分子名称: DNA (5'-D(*AP*CP*CP*GP*CP*CP*GP*GP*CP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*GP*CP*CP*GP*GP*CP*GP*GP*T)-3')
著者Timsit, Y, Vilbois, E, Moras, D.
登録日1997-04-29
公開日1997-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Base-pairing shift in the major groove of (CA)n tracts by B-DNA crystal structures.
Nature, 354, 1991
343D
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STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA
分子名称: DNA (5'-D(*GP*(5CM)P*TP*AP*GP*C)-3')
著者Mooers, B.H.M, Eichman, B.F, Ho, P.S.
登録日1997-06-26
公開日1997-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Parameters from Single-Crystal Structures for Accurate Models of A-DNA
To be Published
35C8
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CATALYTIC ANTIBODY 5C8, FAB-INHIBITOR COMPLEX
分子名称: IGG 5C8, N-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE
著者Gruber, K, Wilson, I.A.
登録日1998-03-18
公開日1999-03-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for antibody catalysis of a disfavored ring closure reaction.
Biochemistry, 38, 1999
2ZZ4
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Covalent complex of orotidine monophosphate decarboxylase D75N mutant from M. thermoautotrophicum with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3AG6
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Crystal Structure of Pantothenate Synthetase from Staphylococcus aureus in complex with pantoyl adenylate
分子名称: ACETIC ACID, PANTOYL ADENYLATE, Pantothenate synthetase, ...
著者Satoh, A, Konishi, S, Tamura, H, Stickland, H.G, Whitney, H.M, Smith, A.G, Matsumura, H, Inoue, T.
登録日2010-03-19
公開日2010-07-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate-induced closing of the active site revealed by the crystal structure of pantothenate synthetase from Staphylococcus aureus.
Biochemistry, 49, 2010
311D
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THE ROLE OF HYDROGEN BONDING IN MINOR-GROOVE DRUG-DNA RECOGNITION. STRUCTURE OF A BIS-AMIDINIUM DERIVATIVE OF HOECHST 33258 COMPLEXED TO THE DODECANUCLEOTIDE D(CGCGAATTCGCG)2
分子名称: 5-AMIDINO-2-[2-(4-AMIDINOPHENYL)-5-BENZIMIDAZOLYL]BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Clark, G.R, Boykin, D.W, Czarny, A, Neidle, S.
登録日1997-02-04
公開日1997-02-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a bis-amidinium derivative of hoechst 33258 complexed to dodecanucleotide d(CGCGAATTCGCG)2: the role of hydrogen bonding in minor groove drug-DNA recognition.
Nucleic Acids Res., 25, 1997
348D
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X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: LOW SALT CONCENTRATION
分子名称: DNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3')
著者Luo, M, Finley, J.B.
登録日1997-08-29
公開日1997-10-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray crystal structures of half the human papilloma virus E2 binding site: d(GACCGCGGTC).
Nucleic Acids Res., 26, 1998
361D
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CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP
分子名称: RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*GP*GP*CP*GP*AP*CP*CP*GP*CP*C P*UP*GP*G)-3')
著者Perbandt, M, Nolte, A, Lorenz, S, Erdmann, V.A, Betzel, C.
登録日1997-11-10
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of domain E of Thermus flavus 5S rRNA: a helical RNA structure including a hairpin loop.
FEBS Lett., 429, 1998
345D
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STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA
分子名称: DNA (5'-D(*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3')
著者Mooers, B.H.M, Eichman, B.F, Ho, P.S.
登録日1997-08-15
公開日1997-08-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Parameters from Single-Crystal Structures for Accurate Models of A-DNA
To be Published
398D
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3'-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS-STRAND SYNTHESIS OF HIV REPLICATION
分子名称: DNA/RNA (5'-R(*GP*CP*CP*AP)-D(*CP*TP*GP*C)-3'), RNA (5'-R(*GP*CP*AP*GP*UP*GP*GP*C)-3')
著者Mueller, U, Meier, G, Mochi-Onori, A, Cellai, L, Heumann, H.
登録日1998-05-04
公開日1998-10-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of an eight-base pair duplex containing the 3'-DNA-RNA-5' junction formed during initiation of minus-strand synthesis of HIV replication.
Biochemistry, 37, 1998
3A3U
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Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, L(+)-TARTARIC ACID, Menaquinone biosynthetic enzyme, ...
著者Arai, R, Nishino, A, Nagano, K, Uchikubo-Kamo, T, Katsura, K, Nishimoto, M, Toyama, M, Terada, T, Kuramitsu, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-06-20
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
3A5C
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Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Numoto, N, Hasegawa, Y, Takeda, K, Miki, K.
登録日2009-08-06
公開日2009-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4.51 Å)
主引用文献Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase
Embo Rep., 10, 2009
7WMV
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Structure of human SGLT1-MAP17 complex bound with LX2761
分子名称: N-[2-(dimethylamino)ethyl]-2-methyl-2-[4-[4-[[2-methyl-5-[(2S,3R,4R,5S,6R)-6-methylsulfanyl-3,4,5-tris(oxidanyl)oxan-2-yl]phenyl]methyl]phenyl]butanoylamino]propanamide, PDZK1-interacting protein 1, Sodium/glucose cotransporter 1
著者Chen, L, Niu, Y, Cui, W.
登録日2022-01-17
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural mechanism of SGLT1 inhibitors.
Nat Commun, 13, 2022
1PBI
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CRYSTAL STRUCTURE OF A BOWMAN-BIRK INHIBITOR FROM PEA SEEDS
分子名称: BOWMAN-BIRK PROTEINASE INHIBITOR
著者Li De La Sierra, I, Brunie, S.
登録日1998-08-20
公開日1999-01-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Dimeric crystal structure of a Bowman-Birk protease inhibitor from pea seeds.
J.Mol.Biol., 285, 1999

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