PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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6CX3	S179T Mutant of Yeast PCNA 分子名称: Proliferating cell nuclear antigen 著者 Powers, K.T. 登録日 2018-04-02 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.101 Å) 主引用文献 Identification of New Mutations at the PCNA Subunit Interface that Block Translesion Synthesis. PLoS ONE, 11, 2016
7CDX	Complex STRUCTURE OF A NOVEL VIRULENCE REGULATION FACTOR SghR with its effector sucrose 分子名称: LacI-type transcription factor, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose 著者 Ye, F.Z, Wang, C, Yan, X.F, Zhang, L.H, Gao, Y.G. 登録日 2020-06-20 公開日 2020-07-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.103 Å) 主引用文献 Structural basis of a novel repressor, SghR, controllingAgrobacteriuminfection by cross-talking to plants. J.Biol.Chem., 295, 2020
5V7M	PCNA mutant L126A/I128A Protein Defective in Gene Silencing 分子名称: MAGNESIUM ION, Proliferating cell nuclear antigen 著者 Kondratick, C.M, Litman, J.M, Washington, M.T, Dieckman, L.M. 登録日 2017-03-20 公開日 2018-03-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Crystal structures of PCNA mutant proteins defective in gene silencing suggest a novel interaction site on the front face of the PCNA ring. PLoS ONE, 13, 2018
5V7L	PCNA mutant R61A/D63A Protein Defective in Gene Silencing 分子名称: Proliferating cell nuclear antigen 著者 Kondratick, C.M, Litman, J.M, Washington, M.T, Dieckman, L.M. 登録日 2017-03-20 公開日 2018-03-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.201 Å) 主引用文献 Crystal structures of PCNA mutant proteins defective in gene silencing suggest a novel interaction site on the front face of the PCNA ring. PLoS ONE, 13, 2018
2P4W	Crystal structure of heat shock regulator from Pyrococcus furiosus 分子名称: SULFATE ION, Transcriptional regulatory protein arsR family 著者 Liu, W, Vierke, G, Panjikar, S, Thomm, M, Ladenstein, R. 登録日 2007-03-13 公開日 2007-03-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of the Archaeal Heat Shock Regulator from Pyrococcus furiosus: A Molecular Chimera Representing Eukaryal and Bacterial Features. J.Mol.Biol., 369, 2007
1LX8	Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein 分子名称: Excisionase 著者 Sam, M.D, Papagiannis, C, Connolly, K.M, Corselli, L, Iwahara, J, Lee, J, Phillips, M, Wojciak, J.M, Johnson, R.C, Clubb, R.T. 登録日 2002-06-04 公開日 2003-06-10 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein J.Mol.Biol., 324, 2002
2L6Y	haddock model of GATA1NF:Lmo2LIM2-Ldb1LID 分子名称: Erythroid transcription factor, LIM domain only 2, linker, ... 著者 Wilkinson-White, L, Gamsjaeger, R, Dastmalchi, S, Wienert, B, Stokes, P.H, Crossley, M, Mackay, J.P, Matthews, J.M. 登録日 2010-12-01 公開日 2011-08-31 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural basis of simultaneous recruitment of the transcriptional regulators LMO2 and FOG1/ZFPM1 by the transcription factor GATA1 Proc.Natl.Acad.Sci.USA, 108, 2011
2CU7	Solution structure of the SANT domain of human KIAA1915 protein 分子名称: KIAA1915 protein 著者 Yoneyama, M, Umehara, T, Saito, K, Tochio, N, Koshiba, S, Inoue, M, Tanaka, A, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-05-25 公開日 2005-11-25 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural and Functional Differences of SWIRM Domain Subtypes J.Mol.Biol., 369, 2007
7V7B	CryoEM structure of DDB1-VprBP complex in ARM-up conformation 分子名称: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1 著者 Wang, D, Xu, J, Liu, Q, Xiang, Y. 登録日 2021-08-21 公開日 2022-08-31 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase To Be Published
5YD8	Crystal structure of human PCNA in complex with APIM of human ZRANB3 分子名称: Proliferating cell nuclear antigen, ZRANB3 著者 Hashimoto, H, Tagata, R. 登録日 2017-09-12 公開日 2018-04-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of proliferating cell nuclear antigen (PCNA) bound to an APIM peptide reveals the universality of PCNA interaction. Acta Crystallogr.,Sect.F, 74, 2018
6EYC	Re-refinement of the MCM2-7 double hexamer using ISOLDE 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ... 著者 Croll, T.I. 登録日 2017-11-11 公開日 2018-06-20 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps. Acta Crystallogr D Struct Biol, 74, 2018
5YCO	Complex structure of PCNA with UHRF2 分子名称: E3 ubiquitin-protein ligase UHRF2, GLYCEROL, Proliferating cell nuclear antigen, ... 著者 Wu, M, Chen, W, Hang, T, Wang, C, Zhang, X, Zang, J. 登録日 2017-09-07 公開日 2017-11-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.199 Å) 主引用文献 Structure insights into the molecular mechanism of the interaction between UHRF2 and PCNA. Biochem. Biophys. Res. Commun., 494, 2017
4Y66	Crystal structure of Giardia lamblia Hop2-Mnd1 complex 分子名称: Mnd1, Putative tbpip family protein 著者 Kang, H.A, Shin, H.C, Oh, B.H. 登録日 2015-02-12 公開日 2015-03-18 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structure of Hop2-Mnd1 and mechanistic insights into its role in meiotic recombination Nucleic Acids Res., 43, 2015
2BN8	Solution Structure and interactions of the E .coli Cell Division Activator Protein CedA 分子名称: CELL DIVISION ACTIVATOR CEDA 著者 Chen, H.A, Simpson, P, Huyton, T, Roper, D, Matthews, S. 登録日 2005-03-22 公開日 2006-12-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution Structure and Interactions of the Escherichia Coli Cell Division Activator Protein Ceda. Biochemistry, 44, 2005
7ZR1	Chaetomium thermophilum Mre11-Rad50-Nbs1 complex bound to ATPyS (composite structure) 分子名称: DH domain-containing protein, Double-strand break repair protein, FHA domain-containing protein, ... 著者 Bartho, J.D, Rotheneder, M, Stakyte, K, Lammens, K, Hopfner, K.P. 登録日 2022-05-03 公開日 2023-01-11 最終更新日 2023-12-13 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structure of the Mre11-Rad50-Nbs1 complex reveals the molecular mechanism of scaffolding functions. Mol.Cell, 83, 2023
3DZD	Crystal structure of sigma54 activator NTRC4 in the inactive state 分子名称: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family) 著者 Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. 登録日 2008-07-29 公開日 2008-11-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation. J.Mol.Biol., 384, 2008
6TC0	Crystal structure of MMS19-CIAO1-CIAO2B CIA targeting complex 分子名称: MIP18 family protein galla-2, MMS19 nucleotide excision repair protein homolog, Probable cytosolic iron-sulfur protein assembly protein Ciao1 著者 Kassube, S.A, Thoma, N.H. 登録日 2019-11-04 公開日 2020-07-29 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structural insights into Fe-S protein biogenesis by the CIA targeting complex. Nat.Struct.Mol.Biol., 27, 2020
7OYB	Cryo-EM structure of the 6 hpf zebrafish embryo 80S ribosome 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-13 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
8JU9	Molecular mechanism of the one-component regulator RccR on bacterial metabolism and virulence 分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-KETO-DEOXY-GALACTOSE, DI(HYDROXYETHYL)ETHER, ... 著者 Rui, B, Yibo, Z. 登録日 2023-06-25 公開日 2024-01-17 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular mechanism of the one-component regulator RccR on bacterial metabolism and virulence. Nucleic Acids Res., 52, 2024
4YV9	X-ray crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2 分子名称: Cyclosporin A, SULFATE ION, Transcriptional regulator 著者 Neiditch, M.B, Parashar, V. 登録日 2015-03-19 公開日 2015-04-08 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Rgg protein structure-function and inhibition by cyclic peptide compounds. Proc.Natl.Acad.Sci.USA, 112, 2015
7OYA	Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-13 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
7OYC	Cryo-EM structure of the Xenopus egg 80S ribosome 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A. 登録日 2021-06-24 公開日 2022-07-20 最終更新日 2023-02-08 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 A molecular network of conserved factors keeps ribosomes dormant in the egg. Nature, 613, 2023
3HRY	Crystal structure of PHD in a trigonal space group and partially disordered 分子名称: Prevent host death protein 著者 Garcia-Pino, A, Loris, R. 登録日 2009-06-10 公開日 2010-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Allostery and intrinsic disorder mediate transcription regulation by conditional cooperativity. Cell(Cambridge,Mass.), 142, 2010
8QH5	CryoEM structure of UVSSA(VHS)-CSA-DDB1-DDA1 分子名称: DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, DNA excision repair protein ERCC-8, ... 著者 Lee, S.-H, Sixma, T.K. 登録日 2023-09-06 公開日 2024-08-14 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 CryoEM structure of UVSSA(VHS)-CSA-DDB1-DDA1 To Be Published
3K33	Crystal structure of the Phd-Doc complex 分子名称: ACETATE ION, Death on curing protein, Polypeptide of unknown amino acids and source, ... 著者 Loris, R, Garcia-Pino, A. 登録日 2009-10-01 公開日 2010-08-18 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Allostery and intrinsic disorder mediate transcription regulation by conditional cooperativity. Cell(Cambridge,Mass.), 142, 2010

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