PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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6N0D	Crystal structure of Tdp1 catalytic domain in complex with compound XZ575 分子名称: 1,2-ETHANEDIOL, 4-fluorobenzene-1,2-dicarboxylic acid, Tyrosyl-DNA phosphodiesterase 1 著者 Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S. 登録日 2018-11-07 公開日 2019-11-13 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.453 Å) 主引用文献 Crystal structure of Tdp1 catalytic domain in complex with compound XZ575 To Be Published
6N0N	Crystal structure of Tdp1 catalytic domain in complex with compound XZ574 分子名称: 1,2-ETHANEDIOL, 4-methylbenzene-1,2-dicarboxylic acid, DIMETHYL SULFOXIDE, ... 著者 Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S. 登録日 2018-11-07 公開日 2019-11-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.477 Å) 主引用文献 Crystal structure of Tdp1 catalytic domain To Be Published
2YAL	SinR, Master Regulator of biofilm formation in Bacillus subtilis 分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR SINR, NICKEL (II) ION 著者 Colledge, V.L, Fogg, M.J, Levdikov, V.M, Leech, A, Dodson, E.J, Wilkinson, A.J. 登録日 2011-02-23 公開日 2011-06-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Structure and Organisation of Sinr, the Master Regulator of Biofilm Formation in Bacillus Subtilis. J.Mol.Biol., 411, 2011
1LNW	CRYSTAL STRUCTURE OF THE MEXR REPRESSOR OF THE MEXAB-OPRM MULTIDRUG EFFLUX OPERON OF PSEUDOMONAS AERUGINOSA 分子名称: Multidrug resistance operon repressor 著者 Lim, D.C, Poole, K, Strynadka, N.C.J. 登録日 2002-05-03 公開日 2002-09-11 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of the MexR repressor of the mexRAB-oprM multidrug efflux operon of Pseudomonas aeruginosa. J.Biol.Chem., 277, 2002
5EEU	RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 1.31 MGy 分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB 著者 Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. 登録日 2015-10-23 公開日 2016-05-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
5EEY	RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 11.6 MGy 分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB 著者 Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. 登録日 2015-10-23 公開日 2016-05-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
5EEZ	RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 14.2 MGy 分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB 著者 Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. 登録日 2015-10-23 公開日 2016-05-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
5EF0	RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 16.7 MGy 分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB 著者 Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. 登録日 2015-10-23 公開日 2016-05-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
7P3Q	Streptomyces coelicolor dATP/ATP-loaded NrdR octamer 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Transcriptional repressor NrdR, ... 著者 Martinez-Carranza, M, Stenmark, P. 登録日 2021-07-08 公開日 2022-05-11 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 A nucleotide-sensing oligomerization mechanism that controls NrdR-dependent transcription of ribonucleotide reductases. Nat Commun, 13, 2022
1UL1	Crystal structure of the human FEN1-PCNA complex 分子名称: Flap endonuclease-1, MAGNESIUM ION, Proliferating cell nuclear antigen 著者 Sakurai, S, Kitano, K, Yamaguchi, H, Hamada, K, Okada, K, Fukuda, K, Uchida, M, Ohtsuka, E, Morioka, H, Hakoshima, T. 登録日 2003-09-05 公開日 2005-03-01 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for recruitment of human flap endonuclease 1 to PCNA EMBO J., 24, 2005
2WVB	Structural and mechanistic insights into Helicobacter pylori NikR function 分子名称: FORMIC ACID, GLYCEROL, PUTATIVE NICKEL-RESPONSIVE REGULATOR 著者 Dian, C, Bahlawane, C, Muller, C, Round, A, Delay, C, Fauquant, C, Schauer, K, De Reuse, H, Michaud-Soret, I, Terradot, L. 登録日 2009-10-16 公開日 2010-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and Mechanistic Insights Into Helicobacter Pylori Nikr Activation. Nucleic Acids Res., 38, 2010
2HSG	Structure of transcription regulator CcpA in its DNA-free state 分子名称: Glucose-resistance amylase regulator 著者 Loll, B, Alings, C, Saenger, W, Biesiadka, J. 登録日 2006-07-21 公開日 2007-06-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of full-length transcription regulator CcpA in the apo form. Biochim.Biophys.Acta, 1774, 2007
3ECO	Crystal structure of MepR, a transcription regulator of the Staphylococcus aureus multidrug efflux pump MepA 分子名称: MepR, SULFATE ION 著者 Brennan, R.G, Kumaraswami, M. 登録日 2008-09-01 公開日 2009-02-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural and biochemical characterization of MepR, a multidrug binding transcription regulator of the Staphylococcus aureus multidrug efflux pump MepA. Nucleic Acids Res., 37, 2009
6N0O	Crystal structure of Tdp1 catalytic domain in complex with compound XZ523 分子名称: 1,2-ETHANEDIOL, 4-nitrobenzene-1,2-dicarboxylic acid, Tyrosyl-DNA phosphodiesterase 1 著者 Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S. 登録日 2018-11-07 公開日 2019-11-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.943 Å) 主引用文献 Crystal structure of Tdp1 catalytic domain To Be Published
4ZMS	Structure of the full-length response regulator spr1814 in complex with a phosphate analogue and B3C 分子名称: 5-amino-2,4,6-tribromobenzene-1,3-diyl dihydroperoxide, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Chi, Y.M, Park, A. 登録日 2015-05-04 公開日 2016-04-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural characterization of the full-length response regulator spr1814 in complex with a phosphate analogue reveals a novel conformational plasticity of the linker region Biochem.Biophys.Res.Commun., 473, 2016
3P4Y	Helicase domain of reverse gyrase from Thermotoga maritima - P2 form 分子名称: reverse gyrase helicase domain 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-10-07 公開日 2011-06-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain. Biochemistry, 50, 2011
2WVD	Structural and mechanistic insights into Helicobacter pylori NikR function 分子名称: GLYCEROL, PUTATIVE NICKEL-RESPONSIVE REGULATOR, SULFATE ION 著者 Dian, C, Bahlawane, C, Muller, C, Round, A, Delay, C, Fauquant, C, Schauer, K, de Reuse, H, Michaud-Soret, I, Terradot, L. 登録日 2009-10-16 公開日 2010-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural and Mechanistic Insights Into Helicobacter Pylori Nikr Activation. Nucleic Acids Res., 38, 2010
4X6G	Full-length OxyR C199D from pseudomonas aeruginosa 分子名称: GLYCEROL, HYDROGEN PEROXIDE, OxyR 著者 Jo, I, Ha, N.C. 登録日 2014-12-08 公開日 2015-04-29 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural details of the OxyR peroxide-sensing mechanism Proc.Natl.Acad.Sci.USA, 112, 2015
2WVE	Structural and mechanistic insights into Helicobacter pylori NikR function 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CITRIC ACID, GLYCEROL, ... 著者 Dian, C, Bahlawane, C, Muller, C, Round, A, Delay, C, Fauquant, C, Schauer, K, de Reuse, H, Michaud-Soret, I, Terradot, L. 登録日 2009-10-16 公開日 2010-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Mechanistic Insights Into Helicobacter Pylori Nikr Activation. Nucleic Acids Res., 38, 2010
4ZMR	Structural characterization of the full-length response regulator spr1814 in complex with a phosphate analogue reveals a novel conformational plasticity of the linker region 分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator 著者 Chi, Y.M, Park, A. 登録日 2015-05-04 公開日 2016-04-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.001 Å) 主引用文献 Structural characterization of the full-length response regulator spr1814 in complex with a phosphate analogue reveals a novel conformational plasticity of the linker region Biochem.Biophys.Res.Commun., 473, 2016
2WVF	Structural and mechanistic insights into Helicobacter pylori NikR function 分子名称: FORMIC ACID, GLYCEROL, NICKEL (II) ION, ... 著者 Dian, C, Bahlawane, C, Muller, C, Round, A, Delay, C, Fauquant, C, Schauer, K, de Reuse, H, Michaud-Soret, I, Terradot, L. 登録日 2009-10-16 公開日 2010-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural and Mechanistic Insights Into Helicobacter Pylori Nikr Activation. Nucleic Acids Res., 38, 2010
2WVC	Structural and mechanistic insights into Helicobacter pylori NikR function 分子名称: FORMIC ACID, GLYCEROL, PUTATIVE NICKEL-RESPONSIVE REGULATOR, ... 著者 Dian, C, Bahlawane, C, Muller, C, Round, A, Delay, C, Fauquant, C, Schauer, K, de Reuse, H, Michaud-Soret, I, Terradot, L. 登録日 2009-10-16 公開日 2010-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural and Mechanistic Insights Into Helicobacter Pylori Nikr Activation. Nucleic Acids Res., 38, 2010
3KMD	Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer 分子名称: 5'-D(*GP*GP*GP*CP*AP*TP*GP*CP*CP*TP*AP*GP*GP*CP*AP*TP*GP*CP*C)-3', Cellular tumor antigen p53, ZINC ION 著者 Chen, Y, Dey, R, Chen, L. 登録日 2009-11-10 公開日 2010-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer. Structure, 18, 2010
3P4X	Helicase domain of reverse gyrase from Thermotoga maritima 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ... 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-10-07 公開日 2011-06-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain. Biochemistry, 50, 2011
7ABH	Human pre-Bact-2 spliceosome (SF3b/U2 snRNP portion) 分子名称: Cell division cycle 5-like protein, DNA/RNA-binding protein KIN17, MINX M3 pre-mRNA, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2020-12-09 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020

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