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5Z51
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Helicase binding domain of primase from Mycobacterium tuberculosis
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, DNA primase
著者Sharma, D.P, Gourinath, S.
登録日2018-01-16
公開日2018-11-28
実験手法X-RAY DIFFRACTION (1.583 Å)
主引用文献Structural insights into the interaction of helicase and primase inMycobacterium tuberculosis.
Biochem. J., 475, 2018
5CBE
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E10 in complex with CXCL13
分子名称: 1,2-ETHANEDIOL, C-X-C motif chemokine 13, E10 heavy chain, ...
著者Tu, C, Bard, J, Mosyak, L.
登録日2015-06-30
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Combination of Structural and Empirical Analyses Delineates the Key Contacts Mediating Stability and Affinity Increases in an Optimized Biotherapeutic Single-chain Fv (scFv).
J. Biol. Chem., 291, 2016
6ZJQ
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BU of 6zjq by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with galactose
分子名称: ACETATE ION, Beta-galactosidase, MALONATE ION, ...
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2020-06-29
公開日2020-08-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 21, 2020
6ZJW
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BU of 6zjw by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with galactose
分子名称: Beta-galactosidase, beta-D-galactopyranose
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2020-06-29
公開日2020-08-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.119 Å)
主引用文献Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 21, 2020
6ZKF
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Complex I during turnover, open3
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
著者Kampjut, D, Sazanov, L.A.
登録日2020-06-30
公開日2020-10-14
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
6ZKU
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Deactive complex I, open3
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE MONOPHOSPHATE, ...
著者Kampjut, D, Sazanov, L.A.
登録日2020-06-30
公開日2020-10-07
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
6RLW
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Structure of the human 8-oxoguanine DNA Glycosylase hOGG1 in complex with inhibitor TH5487
分子名称: 4-(4-bromanyl-2-oxidanylidene-3~{H}-benzimidazol-1-yl)-~{N}-(4-iodophenyl)piperidine-1-carboxamide, N-glycosylase/DNA lyase
著者Masuyer, G, Stenmark, P.
登録日2019-05-03
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Targeting OGG1 arrests cancer cell proliferation by inducing replication stress.
Nucleic Acids Res., 48, 2020
6YW0
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Lysine-N,N-Dimethylated HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with BB-287
分子名称: 4-(isoquinolin-3-ylamino)-4-oxobutanoic acid, BICARBONATE ION, Egl nine homolog 1, ...
著者Chowdhury, R, Schofield, C.J.
登録日2020-04-29
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.
Sci Rep, 10, 2020
6RQE
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CYP121 in complex with 3-acetylene dicyclotyrosine
分子名称: 3-acetylene dicyclotyrosine, Mycocyclosin synthase, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Poddar, H, Levy, C.
登録日2019-05-15
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structure-Activity Relationships ofcyclo(l-Tyrosyl-l-tyrosine) Derivatives Binding toMycobacterium tuberculosisCYP121: Iodinated Analogues Promote Shift to High-Spin Adduct.
J.Med.Chem., 62, 2019
3G39
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BU of 3g39 by Molmil
Structure of a lamprey variable lymphocyte receptor
分子名称: Variable lymphocyte receptor VLRB.2D
著者Deng, L, Velikovsky, C.A, Mariuzza, R.A.
登録日2009-02-02
公開日2009-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen.
Nat.Struct.Mol.Biol., 16, 2009
6TQH
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Escherichia coli AdhE structure in its extended conformation
分子名称: Aldehyde-alcohol dehydrogenase, FE (III) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Fronzes, R, Pony, P.
登録日2019-12-16
公開日2020-06-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Filamentation of the bacterial bi-functional alcohol/aldehyde dehydrogenase AdhE is essential for substrate channeling and enzymatic regulation.
Nat Commun, 11, 2020
6TJV
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Structure of the NDH-1MS complex from Thermosynechococcus elongatus
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, BETA-CAROTENE, ...
著者Schuller, J.M, Saura, P, Thiemann, J, Schuller, S.K, Gamiz-Hernandez, A.P, Kurisu, G, Nowaczyk, M.M, Kaila, V.R.I.
登録日2019-11-27
公開日2020-02-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Redox-coupled proton pumping drives carbon concentration in the photosynthetic complex I.
Nat Commun, 11, 2020
6T9W
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Crystal structure of formate dehydrogenase FDH2 D222A/Q223R enzyme from Granulicella mallensis MP5ACTX8 in complex with NADP and azide.
分子名称: AZIDE ION, Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Robescu, M.S, Rubini, R, Filippini, F, Bergantino, B, Cendron, L.
登録日2019-10-29
公開日2020-08-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献From the Amelioration of a NADP+-dependent Formate Dehydrogenase to the Discovery of a New Enzyme: Round Trip from Theory to Practice
Chemcatchem, 2020
6TB6
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BU of 6tb6 by Molmil
Crystal structure of formate dehydrogenase FDH2 D222S/Q223R enzyme from Granulicella mallensis MP5ACTX8 in complex with NADP and azide.
分子名称: AZIDE ION, COBALT (II) ION, Formate dehydrogenase, ...
著者Robescu, M.S, Rubini, R, Filippini, F, Bergantino, B, Cendron, L.
登録日2019-11-01
公開日2020-08-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献From the Amelioration of a NADP+-dependent Formate Dehydrogenase to the Discovery of a New Enzyme: Round Trip from Theory to Practice
Chemcatchem, 2020
6JV4
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BU of 6jv4 by Molmil
Crystal structure of metallo-beta-lactamase VMB-1
分子名称: CITRIC ACID, VMB-1, ZINC ION
著者Cheng, Q, Chen, S.
登録日2019-04-15
公開日2019-11-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Genetic and Biochemical Characterization of VMB-1, a Novel Metallo-beta-Lactamase Encoded by a Conjugative, Broad-Host Range IncC Plasmid from Vibrio spp.
Adv Biosyst, 4, 2020
2PNO
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BU of 2pno by Molmil
Crystal structure of human leukotriene C4 synthase
分子名称: DODECYL-BETA-D-MALTOSIDE, GLUTATHIONE, Leukotriene C4 synthase
著者Ago, H, Kanaoka, Y, Irikura, D, Lam, B.K, Shimamura, T, Austen, K.F, Miyano, M.
登録日2007-04-24
公開日2007-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of a human membrane protein involved in cysteinyl leukotriene biosynthesis
Nature, 448, 2007
2OXI
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BU of 2oxi by Molmil
REFINED CRYSTAL STRUCTURE OF CU-SUBSTITUTED ALCOHOL DEHYDROGENASE AT 2.1 ANGSTROMS RESOLUTION
分子名称: ALCOHOL DEHYDROGENASE, COPPER (II) ION, DIMETHYL SULFOXIDE, ...
著者Al-Karadaghi, S, Cedergren-Zeppezauer, E.S.
登録日1993-11-08
公開日1994-01-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Refined structure of Cu-substituted alcohol dehydrogenase at 2.1 A resolution.
Acta Crystallogr.,Sect.D, 51, 1995
7D8B
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BU of 7d8b by Molmil
Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways
分子名称: Eukaryotic translation initiation factor 4E, VH-S4
著者Frosi, Y, Lin, Y.C, Jiang, S, Brown, C.J.
登録日2020-10-07
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Engineering an autonomous VH domain to modulate intracellular pathways and to interrogate the eIF4F complex.
Nat Commun, 13, 2022
3KW4
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Crystal structure of cytochrome 2B4 in complex with the anti-platelet drug ticlopidine
分子名称: 2-{[(3alpha,5alpha,7alpha,8alpha,10alpha,12alpha,17alpha)-3,12-bis{2-[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]ethoxy}cholan-7-yl]oxy}ethyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, ...
著者Gay, S.C, Maekawa, K, Roberts, A.G, Hong, W.-X, Zhang, Q, Stout, C.D, Halpert, J.R.
登録日2009-11-30
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structures of cytochrome P450 2B4 complexed with the antiplatelet drugs ticlopidine and clopidogrel.
Biochemistry, 49, 2010
3EYU
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BU of 3eyu by Molmil
PFA1 Fab fragment complexed with Ror2(518-525)
分子名称: If kappa light chain, PFA1 Fab Heavy Chain, ROR2(518-525) peptide
著者Gardberg, A.S, Dealwis, C.G.
登録日2008-10-21
公開日2009-05-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structures of Abeta-related peptide--monoclonal antibody complexes.
Biochemistry, 48, 2009
5APW
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BU of 5apw by Molmil
Sequence MATKDD inserted between GCN4 adaptors - Structure T6
分子名称: CALCIUM ION, CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4, ...
著者Hartmann, M.D, Mendler, C.T, Lupas, A.N, Hernandez Alvarez, B.
登録日2015-09-17
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献alpha / beta coiled coils.
Elife, 5, 2016
5APX
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Sequence MATKDDIAN inserted between GCN4 adaptors - Structure T9(6)
分子名称: GENERAL CONTROL PROTEIN GCN4, PHOSPHATE ION
著者Hartmann, M.D, Mendler, C.T, Lupas, A.N, Hernandez Alvarez, B.
登録日2015-09-17
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献alpha / beta coiled coils.
Elife, 5, 2016
5APT
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BU of 5apt by Molmil
Sequence IENKADKAD inserted between GCN4 adaptors - Structure A9
分子名称: GENERAL CONTROL PROTEIN GCN4
著者Hartmann, M.D, Mendler, C.T, Lupas, A.N, Hernandez Alvarez, B.
登録日2015-09-17
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献alpha / beta coiled coils.
Elife, 5, 2016
5APS
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Sequence IENKKAD inserted between GCN4 adaptors - Structure A7
分子名称: GENERAL CONTROL PROTEIN GCN4
著者Hartmann, M.D, Mendler, C.T, Lupas, A.N, Hernandez Alvarez, B.
登録日2015-09-17
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献alpha / beta coiled coils.
Elife, 5, 2016
3E5W
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Crystal Structure Analysis of FP611
分子名称: Red fluorescent protein eqFP611
著者Nienhaus, K, Nar, H, Heilker, R, Wiedenmann, J, Nienhaus, G.U.
登録日2008-08-14
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Trans-cis isomerization is responsible for the red-shifted fluorescence in variants of the red fluorescent protein eqFP611.
J.Am.Chem.Soc., 130, 2008

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