PDB: 35881 件ウェブページステータス検索Chemie searchBIRD

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5EQV	1.45 Angstrom Crystal Structure of Bifunctional 2',3'-cyclic Nucleotide 2'-phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein from Yersinia pestis with Phosphate bound to the Active site 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-MALATE, FE (III) ION, ... 著者 Minasov, G, Shuvalova, L, Brunzelle, J.S, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2015-11-13 公開日 2015-11-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 1.45 Angstrom Crystal Structure of Bifunctional 2',3'-cyclic Nucleotide 2'-phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein from Yersinia pestis with Phosphate bound to the Active site. To Be Published
5K7O	MicroED structure of lysozyme at 1.8 A resolution 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 de la Cruz, M.J, Hattne, J, Shi, D, Seidler, P, Rodriguez, J, Reyes, F.E, Sawaya, M.R, Cascio, D, Eisenberg, D, Gonen, T. 登録日 2016-05-26 公開日 2017-04-05 最終更新日 2018-08-22 実験手法 ELECTRON CRYSTALLOGRAPHY (1.8 Å) 主引用文献 Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED. Nat. Methods, 14, 2017
5EEC	Crystal structure of KPC-2 beta-lactamase in complex with the S02030 boronic acid inhibitor 分子名称: 1-{(2R)-2-(dihydroxyboranyl)-2-[(thiophen-2-ylacetyl)amino]ethyl}-1H-1,2,3-triazole-4-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC, SULFATE ION 著者 Nguyen, N.Q, van den Akker, F. 登録日 2015-10-22 公開日 2016-02-03 最終更新日 2016-03-09 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Crystal Structures of KPC-2 and SHV-1 beta-Lactamases in Complex with the Boronic Acid Transition State Analog S02030. Antimicrob.Agents Chemother., 60, 2016
5EFU	Resting state of rat cysteine dioxygenase H155Q variant 分子名称: Cysteine dioxygenase type 1, FE (II) ION 著者 Fellner, M, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M. 登録日 2015-10-26 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Resting state of rat cysteine dioxygenase H155Q variant To be published
5KAF	RT XFEL structure of Photosystem II in the dark state at 3.0 A resolution 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Young, I.D, Ibrahim, M, Chatterjee, R, Gul, S, Koroidov, S, Brewster, A.S, Tran, R, Alonso-Mori, R, Fuller, F, Kroll, T, Michels-Clark, T, Laksmono, H, Sierra, R.G, Stan, C.A, Saracini, C, Bean, M.A, Seuffert, I, Sokaras, D, Weng, T.-C, Hunter, M.S, Aquila, A, Koglin, J.E, Robinson, J, Liang, M, Boutet, S, Lyubimov, A.Y, Uervirojnangkoorn, M, Moriarty, N.W, Liebschner, D, Afonine, P.V, Waterman, D.G, Evans, G, Dobbek, H, Weis, W.I, Brunger, A.T, Zwart, P.H, Adams, P.D, Zouni, A, Messinger, J, Bergmann, U, Sauter, N.K, Kern, J, Yachandra, V.K, Yano, J. 登録日 2016-06-01 公開日 2016-11-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.00001 Å) 主引用文献 Structure of photosystem II and substrate binding at room temperature. Nature, 540, 2016
5KAH	Crystal structure of a dioxygenase in the Crotonase superfamily in P21, V425T mutant 分子名称: (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE 著者 Li, K, Fielding, E.N, Condurso, H.L, Bruner, S.D. 登録日 2016-06-01 公開日 2017-06-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.779 Å) 主引用文献 Probing the structural basis of oxygen binding in a cofactor-independent dioxygenase. Acta Crystallogr D Struct Biol, 73, 2017
5KDY	The crystal structure of the D251N mutant of CYP199A4 in complex with 4-methoxybenzoate 分子名称: 4-METHOXYBENZOIC ACID, CHLORIDE ION, Cytochrome P450, ... 著者 Coleman, T, Bruning, J.B, Bell, S.G. 登録日 2016-06-08 公開日 2018-02-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.589 Å) 主引用文献 The crystal structure of the D251N mutant of CYP199A4 in complex with 4-methoxybenzoate To Be Published
5KF0	Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2016-06-10 公開日 2016-11-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis to be published
5GZC	Crystal structure of Galectin-8 N-CRD with part of linker 分子名称: GLYCEROL, Galectin-8, SODIUM ION 著者 Su, J.Y, Si, Y.L. 登録日 2016-09-28 公開日 2016-12-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker. Int J Mol Sci, 17, 2016
5JWW	T4 Lysozyme L99A/M102Q with 1-Hydro-2-ethyl-1,2-azaborine Bound 分子名称: 2-ethyl-1,2-dihydro-1,2-azaborinine, CHLORIDE ION, Endolysin 著者 Lee, H, Fischer, M, Shoichet, B.K, Liu, S.-Y. 登録日 2016-05-12 公開日 2016-09-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Hydrogen Bonding of 1,2-Azaborines in the Binding Cavity of T4 Lysozyme Mutants: Structures and Thermodynamics. J.Am.Chem.Soc., 138, 2016
5H00	The crystal structure of D-2-haloacid dehalogenase 分子名称: (R)-2-haloacid dehalogenase 著者 Wang, Y, Xue, S. 登録日 2016-10-02 公開日 2017-10-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 The crystal structure of D-2-haloacid dehalogenase To Be Published
5JY7	Complex of Mycobacterium smegmatis trehalose synthase with maltokinase 分子名称: CALCIUM ION, Maltokinase, Trehalose synthase/amylase TreS 著者 Futterer, K, Kermani, A.A, Besra, G.S. 登録日 2016-05-13 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Crystal structure of the TreS-Pep2 complex, initiating alpha-glucan synthesis in the GlgE pathway of mycobacteria. J.Biol.Chem., 2019
2XHC	Crystal Structure of Thermotoga maritima N-utilization Substance G (NusG) 分子名称: TRANSCRIPTION ANTITERMINATION PROTEIN NUSG 著者 Stegmann, C.M, Wahl, M.C. 登録日 2010-06-14 公開日 2011-06-29 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 An Autoinhibited State in the Structure of Thermotoga Maritima Nusg. Structure, 21, 2013
5H1B	Human RAD51 presynaptic complex 分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA repair protein RAD51 homolog 1, MAGNESIUM ION, ... 著者 Xu, J, Zhao, L, Xu, Y, Zhao, W, Sung, P, Wang, H.W. 登録日 2016-10-08 公開日 2016-12-21 最終更新日 2022-03-23 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Cryo-EM structures of human RAD51 recombinase filaments during catalysis of DNA-strand exchange Nat. Struct. Mol. Biol., 24, 2017
3C6G	Crystal structure of CYP2R1 in complex with vitamin D3 分子名称: (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Cytochrome P450 2R1, ... 著者 Strushkevich, N.V, Min, J, Loppnau, P, Tempel, W, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Plotnikov, A.N, Park, H, Structural Genomics Consortium (SGC) 登録日 2008-02-04 公開日 2008-02-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural analysis of CYP2R1 in complex with vitamin D3. J.Mol.Biol., 380, 2008
5K2P	Crystal structure of lysozyme 分子名称: Lysozyme C 著者 Ko, S, Choe, J. 登録日 2016-05-19 公開日 2017-05-31 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 Crystal structure of lysozyme To Be Published
5JAL	Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered Through X-Ray Fragment Screening 分子名称: (2,5-dihydro-1H-pyrrol-1-yl)(3-fluorophenyl)methanone, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Day, P.J. 登録日 2016-04-12 公開日 2016-05-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered through X-ray Fragment Screening. J.Med.Chem., 59, 2016
5JAS	Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered Through X-Ray Fragment Screening 分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, N-(2',6-dimethyl[1,1'-biphenyl]-3-yl)-1,3-thiazol-2-amine, ... 著者 Day, P.J. 登録日 2016-04-12 公開日 2016-05-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Discovered through X-ray Fragment Screening. J.Med.Chem., 59, 2016
5JCK	Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Os09g0567300 protein 著者 Park, A.K, Kim, H.W. 登録日 2016-04-15 公開日 2016-10-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica Sci Rep, 6
5JCN	Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica 分子名称: ASCORBIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Park, A.K, Kim, H.W. 登録日 2016-04-15 公開日 2016-10-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica Sci Rep, 6, 2016
5GSM	Glycoside hydrolase B with product 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... 著者 Watanabe, M, Kamachi, S, Mine, S. 登録日 2016-08-16 公開日 2017-02-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Glycoside hydrolase B with product To Be Published
5GHT	DNA replication protein 分子名称: SsDNA-specific exonuclease 著者 Oyama, T. 登録日 2016-06-20 公開日 2016-10-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.795 Å) 主引用文献 Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication. Nucleic Acids Res., 44, 2016
5JEN	Crystal structure of the anti-sigma factor RsiV bound to lysozyme 分子名称: Anti-sigma-V factor RsiV, CHLORIDE ION, Lysozyme C, ... 著者 Gakhar, L, Williams, K.B, Ellermeir, C.D. 登録日 2016-04-18 公開日 2016-09-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The anti-sigma factor RsiV is a receptor for lysozyme: The crystal structure of RsiV-lysozyme complex To Be Published
5JFL	Crystal structure of Rhodopseudomonas palustris propionaldehyde dehydrogenase with bound NAD+ 分子名称: Aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Zarzycki, J, Sutter, M, Kerfeld, C.A. 登録日 2016-04-19 公開日 2017-03-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 In Vitro Characterization and Concerted Function of Three Core Enzymes of a Glycyl Radical Enzyme - Associated Bacterial Microcompartment. Sci Rep, 7, 2017
5JIF	Crystal structure of mouse hepatitis virus strain DVIM Hemagglutinin-Esterase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... 著者 Zeng, Q.H, Bakkers, M.J.G, Feitsma, L.J, de Groot, R.J, Huizinga, E.G. 登録日 2016-04-22 公開日 2016-05-11 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Coronavirus receptor switch explained from the stereochemistry of protein-carbohydrate interactions and a single mutation. Proc.Natl.Acad.Sci.USA, 113, 2016

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