PDB: 868 件ウェブページステータス検索Chemie searchBIRD

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2OU0	1-methylpyrrole in complex with T4 Lysozyme L99A 分子名称: 1-METHYL-1H-PYRROLE, Lysozyme, PHOSPHATE ION 著者 Graves, A.P, Shoichet, B.K. 登録日 2007-02-09 公開日 2007-08-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Predicting absolute ligand binding free energies to a simple model site. J.Mol.Biol., 371, 2007
2OU8	Structure of Spin-labeled T4 Lysozyme Mutant T115R1 at Room Temperature 分子名称: BETA-MERCAPTOETHANOL, Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L. 登録日 2007-02-09 公開日 2007-06-12 最終更新日 2023-08-30 実験手法 EPR (1.8 Å), X-RAY DIFFRACTION 主引用文献 Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme. Protein Sci., 16, 2007
2RB2	3-methylbenzylazide in complex with T4 lysozyme L99A 分子名称: 1-(azidomethyl)-3-methylbenzene, Lysozyme, PHOSPHATE ION 著者 Graves, A.P, Boyce, S.E, Shoichet, B.K. 登録日 2007-09-17 公開日 2008-03-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.463 Å) 主引用文献 Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2OU9	Structure of Spin-labeled T4 Lysozyme Mutant T115R1/R119A 分子名称: Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L. 登録日 2007-02-09 公開日 2007-06-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme. Protein Sci., 16, 2007
2Q9E	Structure of spin-labeled T4 lysozyme mutant S44R1 分子名称: 2-HYDROXYETHYL DISULFIDE, Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L. 登録日 2007-06-12 公開日 2007-06-26 最終更新日 2023-08-30 実験手法 EPR (2.1 Å), X-RAY DIFFRACTION 主引用文献 Structural determinants of nitroxide motion in spin-labeled proteins: Solvent-exposed sites in helix B of T4 lysozyme. Protein Sci., 17, 2008
2OTZ	N-methylaniline in complex with T4 Lysozyme L99A 分子名称: Lysozyme, N-METHYLANILINE, PHOSPHATE ION 著者 Graves, A.P, Shoichet, B.K. 登録日 2007-02-09 公開日 2007-08-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Predicting absolute ligand binding free energies to a simple model site. J.Mol.Biol., 371, 2007
2Q9D	Structure of spin-labeled T4 lysozyme mutant A41R1 分子名称: BETA-MERCAPTOETHANOL, Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L. 登録日 2007-06-12 公開日 2007-06-26 最終更新日 2023-08-30 実験手法 EPR (1.4 Å), X-RAY DIFFRACTION 主引用文献 Structural determinants of nitroxide motion in spin-labeled proteins: Solvent-exposed sites in helix B of T4 lysozyme. Protein Sci., 17, 2008
2LCB	Solution Structure of a Minor and Transiently Formed State of a T4 Lysozyme Mutant 分子名称: Lysozyme 著者 Bouvignies, G, Vallurupalli, P, Hansen, D, Correia, B, Lange, O, Bah, A, Vernon, R.M, Dahlquist, F.W, Baker, D, Kay, L.E. 登録日 2011-04-26 公開日 2011-08-17 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of a minor and transiently formed state of a T4 lysozyme mutant. Nature, 477, 2011
2LC9	Solution Structure of a Minor and Transiently Formed State of a T4 Lysozyme Mutant 分子名称: Lysozyme 著者 Bouvignies, G, Vallurupalli, P, Hansen, D, Correia, B, Lange, O, Bah, A, Vernon, R.M, Dahlquist, F.W, Baker, D, Kay, L.E. 登録日 2011-04-26 公開日 2011-08-17 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of a minor and transiently formed state of a T4 lysozyme mutant. Nature, 477, 2011
3SB7	Cu-mediated Trimer of T4 Lysozyme D61H/K65H/R76H/R80H by Synthetic Symmetrization 分子名称: COPPER (II) ION, GLYCEROL, Lysozyme 著者 Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O. 登録日 2011-06-03 公開日 2011-09-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 An approach to crystallizing proteins by metal-mediated synthetic symmetrization. Protein Sci., 20, 2011
3RUN	New strategy to analyze structures of glycopeptide antibiotic-target complexes 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... 著者 Economou, N.J, Townsend, T.M, Loll, P.J. 登録日 2011-05-05 公開日 2012-06-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 A carrier protein strategy yields the structure of dalbavancin. J.Am.Chem.Soc., 134, 2012
3SBA	Zn-mediated Hexamer of T4 Lysozyme R76H/R80H by Synthetic Symmetrization 分子名称: CHLORIDE ION, Lysozyme, ZINC ION 著者 Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O. 登録日 2011-06-03 公開日 2011-09-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 An approach to crystallizing proteins by metal-mediated synthetic symmetrization. Protein Sci., 20, 2011
3SB5	Zn-mediated Trimer of T4 Lysozyme R125C/E128C by Synthetic Symmetrization 分子名称: CHLORIDE ION, GLYCEROL, Lysozyme, ... 著者 Laganowsky, A, Soriaga, A.B, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O. 登録日 2011-06-03 公開日 2011-09-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 An approach to crystallizing proteins by metal-mediated synthetic symmetrization. Protein Sci., 20, 2011
2LZM	STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME REFINED AT 1.7 ANGSTROMS RESOLUTION 分子名称: T4 LYSOZYME 著者 Weaver, L.H, Matthews, B.W. 登録日 1986-08-18 公開日 1986-10-24 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution. J.Mol.Biol., 193, 1987
6A73	Complex structure of CSN2 with IP6 分子名称: COP9 signalosome complex subunit 2,Endolysin, INOSITOL HEXAKISPHOSPHATE, SULFATE ION 著者 Liu, L, Li, D, Rao, F, Wang, T. 登録日 2018-07-02 公開日 2019-07-03 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.447 Å) 主引用文献 Basis for metabolite-dependent Cullin-RING ligase deneddylation by the COP9 signalosome. Proc.Natl.Acad.Sci.USA, 117, 2020
1QSQ	CAVITY CREATING MUTATION 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME 著者 Gassner, N.C, Baase, W.A, Lindstrom, J, Matthews, B.W. 登録日 1999-06-22 公開日 1999-06-29 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Methionine and alanine substitutions show that the formation of wild-type-like structure in the carboxy-terminal domain of T4 lysozyme is a rate-limiting step in folding. Biochemistry, 38, 1999
1QTB	THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME 分子名称: 2-HYDROXYETHYL DISULFIDE, LYSOZYME 著者 Liu, R, Baase, W.A, Matthews, B.W. 登録日 1999-06-26 公開日 1999-07-02 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The introduction of strain and its effects on the structure and stability of T4 lysozyme. J.Mol.Biol., 295, 2000
1QT5	D20E MUTANT STRUCTURE OF T4 LYSOZYME 分子名称: 2-HYDROXYETHYL DISULFIDE, PROTEIN (T4 LYSOZYME) 著者 Kuroki, R, Weaver, L.H, Matthews, B.W. 登録日 1999-06-30 公開日 1999-07-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis of the conversion of T4 lysozyme into a transglycosidase by reengineering the active site. Proc.Natl.Acad.Sci.USA, 96, 1999
1QUG	E108V MUTANT OF T4 LYSOZYME 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME) 著者 Wray, J, Baase, W.A, Lindstrom, J.D, Poteete, A.R, Matthews, B.W. 登録日 1999-07-01 公開日 1999-07-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural analysis of a non-contiguous second-site revertant in T4 lysozyme shows that increasing the rigidity of a protein can enhance its stability. J.Mol.Biol., 292, 1999
1SWY	Use of a Halide Binding Site to Bypass the 1000-atom Limit to Ab initio Structure Determination 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme, ... 著者 Mooers, B.H.M, Matthews, B.W. 登録日 2004-03-30 公開日 2004-11-23 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.06 Å) 主引用文献 Use of an ion-binding site to bypass the 1000-atom limit to structure determination by direct methods. Acta Crystallogr.,Sect.D, 60, 2004
1T8G	Crystal structure of phage T4 lysozyme mutant L32A/L33A/T34A/C54T/C97A/E108V 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme, ... 著者 He, M.M, Wood, Z.A, Baase, W.A, Xiao, H, Matthews, B.W. 登録日 2004-05-12 公開日 2004-10-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Alanine-scanning mutagenesis of the beta-sheet region of phage T4 lysozyme suggests that tertiary context has a dominant effect on beta-sheet formation. Protein Sci., 13, 2004
1QTC	THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME 著者 Liu, R, Baase, W.A, Matthews, B.W. 登録日 1999-06-26 公開日 1999-07-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The introduction of strain and its effects on the structure and stability of T4 lysozyme. J.Mol.Biol., 295, 2000
1T8A	USE OF SEQUENCE DUPLICATION TO ENGINEER A LIGAND-TRIGGERED LONG-DISTANCE MOLECULAR SWITCH IN T4 Lysozyme 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, GUANIDINE, ... 著者 Yousef, M.S, Baase, W.A, Matthews, B.W. 登録日 2004-05-11 公開日 2004-08-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Use of sequence duplication to engineer a ligand-triggered, long-distance molecular switch in T4 lysozyme. Proc.Natl.Acad.Sci.USA, 101, 2004
1T8F	Crystal structure of phage T4 lysozyme mutant R14A/K16A/I17A/K19A/T21A/E22A/C54T/C97A 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme 著者 He, M.M, Wood, Z.A, Baase, W.A, Xiao, H, Matthews, B.W. 登録日 2004-05-12 公開日 2004-10-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Alanine-scanning mutagenesis of the beta-sheet region of phage T4 lysozyme suggests that tertiary context has a dominant effect on beta-sheet formation. Protein Sci., 13, 2004
1T97	Use of sequence duplication to engineer a ligand-triggered long-distance molecular switch in T4 Lysozyme 分子名称: Lysozyme 著者 Yousef, M.S, Baase, W.A, Matthews, B.W. 登録日 2004-05-14 公開日 2004-08-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Use of sequence duplication to engineer a ligand-triggered, long-distance molecular switch in T4 lysozyme. Proc.Natl.Acad.Sci.USA, 101, 2004

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