PDB: 2832 件ウェブページステータス検索Chemie searchBIRD

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8CBJ	Cryo-EM structure of Otu2-bound cytoplasmic pre-40S ribosome biogenesis complex 分子名称: 20S pre-ribosomal RNA, 20S-pre-rRNA D-site endonuclease NOB1, 40S ribosomal protein S0-A, ... 著者 Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2023-01-25 公開日 2023-05-24 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2. Nat Commun, 14, 2023
6KWY	human PA200-20S complex 分子名称: INOSITOL HEXAKISPHOSPHATE, Proteasome activator complex subunit 4, Proteasome subunit alpha type-1, ... 著者 Ouyang, S, Hongxin, G. 登録日 2019-09-09 公開日 2020-04-01 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Cryo-EM structures of the human PA200 and PA200-20S complex reveal regulation of proteasome gate opening and two PA200 apertures. Plos Biol., 18, 2020
2DYH	Crystal structure of the Keap1 protein in complexed with the N-terminal region of the Nrf2 transcription factor 分子名称: Kelch-like ECH-associated protein 1, Nrf2/Neh2 peptide from Nuclear factor erythroid 2-related factor 2, SULFATE ION 著者 Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-09-14 公開日 2007-09-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Different electrostatic potentials define ETGE and DLG motifs as hinge and latch in oxidative stress response Mol.Cell.Biol., 27, 2007
4WB8	Crystal structure of human cAMP-dependent protein kinase A (catalytic alpha subunit), exon 1 deletion 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Cheung, J, Ginter, C, Cassidy, M, Franklin, M.C, Rudolph, M.J, Hendrickson, W.A. 登録日 2014-09-02 公開日 2015-01-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural insights into mis-regulation of protein kinase A in human tumors. Proc.Natl.Acad.Sci.USA, 112, 2015
2NTE	Crystal Structure of the BARD1 BRCT Domains 分子名称: 1,2-ETHANEDIOL, BRCA1-associated RING domain protein 1, CHLORIDE ION, ... 著者 Birrane, G, Varma, A.K, Soni, A, Ladias, J.A.A. 登録日 2006-11-07 公開日 2007-06-12 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of the BARD1 BRCT domains. Biochemistry, 46, 2007
2G45	Co-crystal structure of znf ubp domain from the deubiquitinating enzyme isopeptidase T (isot) in complex with ubiquitin 分子名称: CHLORIDE ION, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 5, ... 著者 Reyes-Turcu, F.E, Horton, J.R, Mullally, J.E, Heroux, A, Cheng, X, Wilkinson, K.D. 登録日 2006-02-21 公開日 2006-04-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 The Ubiquitin Binding Domain ZnF UBP Recognizes the C-Terminal Diglycine Motif of Unanchored Ubiquitin. Cell(Cambridge,Mass.), 124, 2006
2G43	Structure of the ZNF UBP domain from deubiquitinating enzyme isopeptidase T (IsoT) 分子名称: UNKNOWN ATOM OR ION, Ubiquitin carboxyl-terminal hydrolase 5, ZINC ION 著者 Reyes-Turcu, F.E, Horton, J.R, Mullally, J.E, Heroux, A, Cheng, X, Wilkinson, K.D. 登録日 2006-02-21 公開日 2006-04-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 The Ubiquitin Binding Domain ZnF UBP Recognizes the C-Terminal Diglycine Motif of Unanchored Ubiquitin. Cell(Cambridge,Mass.), 124, 2006
6GHS	Modification dependent TagI restriction endonuclease 分子名称: SODIUM ION, TagI restriction endonuclease, ZINC ION 著者 Kisiala, M, Copelas, A, Czapinska, H, Xu, S, Bochtler, M. 登録日 2018-05-08 公開日 2018-08-29 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Crystal structure of the modification-dependent SRA-HNH endonuclease TagI. Nucleic Acids Res., 46, 2018
8CAH	Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... 著者 Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2023-01-24 公開日 2023-05-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2. Nat Commun, 14, 2023
5A5H	The crystal structure of the GST-like domains complex of EPRS C92SC105SC123S mutant-AIMP2 分子名称: AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONA L PROTEIN 2, BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE 著者 Cho, H.Y, Kang, B.S. 登録日 2015-06-18 公開日 2016-06-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.318 Å) 主引用文献 The Crystal Structure of the Gst-Like Domains Complex of Eprs C92Sc105Sc123S Mutant-Aimp2 To be Published
5CLQ	Ran Y39A in complex with GPPNHP and RanBD1 分子名称: E3 SUMO-protein ligase RanBP2, GTP-binding nuclear protein Ran, MAGNESIUM ION, ... 著者 Vetter, I.R, Brucker, S. 登録日 2015-07-16 公開日 2015-09-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Catalysis of GTP Hydrolysis by Small GTPases at Atomic Detail by Integration of X-ray Crystallography, Experimental, and Theoretical IR Spectroscopy. J.Biol.Chem., 290, 2015
8AGW	Yeast RQC complex in state D 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
3ONH	Crystal structure of UBA2ufd-Ubc9: insights into E1-E2 interactions in Sumo pathways 分子名称: Ubiquitin-activating enzyme E1-like 著者 Wang, J, Taherbhoy, A.M, Hunt, H.W, Seyedin, S.N, Miller, D.W, Huang, D.T, Schulman, B.A. 登録日 2010-08-28 公開日 2011-01-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.601 Å) 主引用文献 Crystal structure of UBA2(ufd)-Ubc9: insights into E1-E2 interactions in Sumo pathways. Plos One, 5, 2010
7D8R	MITF HLHLZ structure 分子名称: Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit 著者 Guo, M, Fang, P, Wang, J. 登録日 2020-10-09 公開日 2021-10-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy. Cell Res., 33, 2023
7D8S	MITF bHLHLZ apo structure 分子名称: Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit, SULFATE ION 著者 Guo, M, Fang, P, Wang, J. 登録日 2020-10-09 公開日 2021-10-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy. Cell Res., 33, 2023
8B6F	Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ... 著者 Muhleip, A, Kock Flygaard, R, Amunts, A. 登録日 2022-09-27 公開日 2023-03-29 最終更新日 2023-04-12 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex. Nature, 615, 2023
8AGT	Yeast RQC complex in state F 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGX	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGZ	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AAF	Yeast RQC complex in state G 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-01 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGV	Yeast RQC complex in state H 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGU	Yeast RQC complex in state E 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
3ONG	Crystal structure of UBA2ufd-Ubc9: insights into E1-E2 interactions in Sumo pathways 分子名称: SUMO-conjugating enzyme UBC9, Ubiquitin-activating enzyme E1-like 著者 Wang, J, Taherbhoy, A.M, Hunt, H.W, Seyedin, S.N, Miller, D.W, Huang, D.T, Schulman, B.A. 登録日 2010-08-28 公開日 2011-01-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of UBA2(ufd)-Ubc9: insights into E1-E2 interactions in Sumo pathways. Plos One, 5, 2010
3U5P	Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-28)K9me3K14acK18acK23ac histone peptide 分子名称: E3 ubiquitin-protein ligase TRIM33, Histone H3.1, ZINC ION 著者 Wang, Z, Patel, D.J. 登録日 2011-10-11 公開日 2012-01-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A poised chromatin platform for TGF-beta access to master regulators Cell(Cambridge,Mass.), 147, 2011
3U5N	Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-20)K9me3K14ac histone peptide 分子名称: E3 ubiquitin-protein ligase TRIM33, Histone H3.1, ZINC ION 著者 Wang, Z, Patel, D.J. 登録日 2011-10-11 公開日 2012-01-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A Poised Chromatin Platform for TGF-beta access to master regulators Cell(Cambridge,Mass.), 147, 2011

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