PDB: 7404 件ウェブページステータス検索Chemie searchBIRD

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7BL6	50S-ObgE-GMPPNP particle 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Hilal, T, Nikolay, R, Schmidt, S, Spahn, C.M.T. 登録日 2021-01-18 公開日 2021-05-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization. Mol.Cell, 81, 2021
7BL3	pre-50S-ObgE particle state 2 分子名称: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ... 著者 Hilal, T, Nikolay, R, Spahn, C.M.T. 登録日 2021-01-18 公開日 2021-05-12 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization. Mol.Cell, 81, 2021
7BL2	pre-50S-ObgE particle state 1 分子名称: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ... 著者 Hilal, T, Nikolay, R, Schmidt, S, Spahn, C.M.T. 登録日 2021-01-18 公開日 2021-05-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization. Mol.Cell, 81, 2021
7BL5	pre-50S-ObgE particle 分子名称: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ... 著者 Hilal, T, Nikolay, R, Spahn, C.M.T, Schmidt, S. 登録日 2021-01-18 公開日 2021-05-12 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization. Mol.Cell, 81, 2021
7BL4	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Hilal, T, Nikolay, R, Spahn, C.M.T. 登録日 2021-01-18 公開日 2021-05-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization. Mol.Cell, 81, 2021
6U48	E. coli 50S with phazolicin (PHZ) bound in exit tunnel 分子名称: 23S rRNA, 50S ribosomal protein bL17, 50S ribosomal protein bL19, ... 著者 Watson, Z.L, Cate, J.H.D, Polikanov, Y.S, Severinov, K. 登録日 2019-08-23 公開日 2019-09-18 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.87 Å) 主引用文献 Structure of ribosome-bound azole-modified peptide phazolicin rationalizes its species-specific mode of bacterial translation inhibition. Nat Commun, 10, 2019
6SV4	The cryo-EM structure of SDD1-stalled collided trisome. 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Tesina, P, Buschauer, R, Cheng, J, Becker, T, Beckmann, R. 登録日 2019-09-17 公開日 2020-03-04 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1. Nat.Struct.Mol.Biol., 27, 2020
8AGT	Yeast RQC complex in state F 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AAF	Yeast RQC complex in state G 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-01 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8BN3	Yeast 80S, ES7s delta, eIF5A, Stm1 containing 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Dimitrova-Paternoga, L, Paternoga, H, Wilson, D.N. 登録日 2022-11-12 公開日 2024-01-10 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Evolving precision: rRNA expansion segment 7S modulates translation velocity and accuracy in eukaryal ribosomes. Nucleic Acids Res., 52, 2024
3O7B	Crystal structure of Archaeoglobus Fulgidus Nep1 bound to S-adenosylhomocysteine 分子名称: Ribosome biogenesis Nep1 RNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, TYROSINE 著者 Thomas, S.R, LaRonde-LeBlanc, N. 登録日 2010-07-30 公開日 2011-01-19 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural insight into the functional mechanism of Nep1/Emg1 N1-specific pseudouridine methyltransferase in ribosome biogenesis. Nucleic Acids Res., 39, 2011
7AJT	Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021
2B7U	Ribosome inactivating protein type 1 from Charybdis maritima AGG 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHARYBDIN 著者 Gessmann, R, Petratos, K. 登録日 2005-10-05 公開日 2006-06-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Isolation, characterization, sequencing and crystal structure of charybdin, a type 1 ribosome-inactivating protein from Charybdis maritima agg. Febs J., 273, 2006
5WWN	Crystal structure of Tsr1 分子名称: Ribosome biogenesis protein TSR1, SULFATE ION 著者 Ye, K, Wang, B. 登録日 2017-01-03 公開日 2017-06-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.805 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome Elife, 6, 2017
8AGV	Yeast RQC complex in state H 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGZ	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGW	Yeast RQC complex in state D 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGU	Yeast RQC complex in state E 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
8AGX	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Tesina, P, Buschauer, R, Beckmann, R. 登録日 2022-07-20 公開日 2023-03-08 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell, 83, 2023
2JJR	V232K, N236D-trichosanthin 分子名称: DI(HYDROXYETHYL)ETHER, RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN, SULFATE ION, ... 著者 Too, P.H, Ma, M.K, Mak, A.N, Tung, C.K, Zhu, G, Au, S.W, Wong, K.B, Shaw, P.C. 登録日 2008-04-21 公開日 2008-12-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The C-Terminal Fragment of the Ribosomal P Protein Complexed to Trichosanthin Reveals the Interaction between the Ribosome-Inactivating Protein and the Ribosome. Nucleic Acids Res., 37, 2009
7AJU	Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021
7PD3	Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP 分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Chandrasekaran, V, Desai, N, Burton, N.O, Yang, H, Price, J, Miska, E.A, Ramakrishnan, V. 登録日 2021-08-04 公開日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Visualizing formation of the active site in the mitochondrial ribosome. Elife, 10, 2021
6HIY	Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3 分子名称: 9S rRNA, MAGNESIUM ION, SPERMIDINE, ... 著者 Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boehringer, D, Schneider, A, Ban, N. 登録日 2018-08-31 公開日 2018-09-26 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.27 Å) 主引用文献 Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes. Science, 362, 2018
6HIW	Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3 分子名称: 9S rRNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Ramrath, D, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boehringer, D, Schneider, A, Ban, N. 登録日 2018-08-31 公開日 2018-09-26 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes. Science, 362, 2018
1RL0	Crystal structure of a new ribosome-inactivating protein (RIP): dianthin 30 分子名称: Antiviral protein DAP-30 著者 Fermani, S, Falini, G, Ripamonti, A, Bolognesi, A, Polito, L, Stirpe, F. 登録日 2003-11-24 公開日 2004-12-07 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The 1.4A structure of dianthin 30 indicates a role of surface potential at the active site of type 1 ribosome inactivating proteins J.Struct.Biol., 149, 2005

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