PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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4QHD	Crystal structure of apo human APE1 分子名称: 1,2-ETHANEDIOL, DNA-(apurinic or apyrimidinic site) lyase 著者 He, H, Chen, Q, Georgiadis, M.M. 登録日 2014-05-28 公開日 2014-11-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 High-resolution crystal structures reveal plasticity in the metal binding site of apurinic/apyrimidinic endonuclease I. Biochemistry, 53, 2014
4QH9	Crystal structure of Mn2+ bound human APE1 分子名称: 1,2-ETHANEDIOL, DNA-(apurinic or apyrimidinic site) lyase, MANGANESE (II) ION 著者 Chen, Q, He, H, Georgiadis, M.M. 登録日 2014-05-27 公開日 2014-11-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.175 Å) 主引用文献 High-resolution crystal structures reveal plasticity in the metal binding site of apurinic/apyrimidinic endonuclease I. Biochemistry, 53, 2014
5GSU	Crystal structure of nucleosome core particle consisting of human testis-specific histone variants, Th2A and Th2B 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-A, ... 著者 Kumarevel, T, Sivaraman, P. 登録日 2016-08-17 公開日 2017-02-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b Biophys. Chem., 221, 2017
3OSF	The structure of protozoan parasite Trichomonas vaginalis Myb2 in complex with MRE-2f-13 DNA 分子名称: 5'-D(*CP*AP*AP*GP*AP*CP*GP*AP*TP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*AP*TP*CP*GP*TP*CP*TP*TP*G)-3', ISOPROPYL ALCOHOL, ... 著者 Jiang, I, Tsai, C.K, Chen, S.C, Wang, S.H, Amiraslanov, I, Chang, C.F, Wu, W.J, Tai, J.H, Liaw, Y.C, Huang, T.H. 登録日 2010-09-09 公開日 2011-08-03 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.032 Å) 主引用文献 Molecular basis of the recognition of the ap65-1 gene transcription promoter elements by a Myb protein from the protozoan parasite Trichomonas vaginalis. Nucleic Acids Res., 39, 2011
4QHE	Crystal structure of Mg2+ bound human APE1 分子名称: 1,2-ETHANEDIOL, DNA-(apurinic or apyrimidinic site) lyase, MAGNESIUM ION 著者 He, H, Chen, Q, Georgiadis, M.M. 登録日 2014-05-28 公開日 2014-11-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 High-resolution crystal structures reveal plasticity in the metal binding site of apurinic/apyrimidinic endonuclease I. Biochemistry, 53, 2014
3OSG	The structure of protozoan parasite Trichomonas vaginalis Myb2 in complex with MRE-1-12 DNA 分子名称: 5'-D(*AP*AP*AP*TP*AP*TP*CP*GP*TP*TP*AP*T)-3', 5'-D(*AP*TP*AP*AP*CP*GP*AP*TP*AP*TP*TP*T)-3', MYB21 著者 Jiang, I, Tsai, C.K, Chen, S.C, Wang, S.H, Amiraslanov, I, Chang, C.F, Wu, W.J, Tai, J.H, Liaw, Y.C, Huang, T.H. 登録日 2010-09-09 公開日 2011-08-03 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.997 Å) 主引用文献 Molecular basis of the recognition of the ap65-1 gene transcription promoter elements by a Myb protein from the protozoan parasite Trichomonas vaginalis. Nucleic Acids Res., 39, 2011
6KW3	The ClassA RSC-Nucleosome Complex 分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ... 著者 Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C. 登録日 2019-09-05 公開日 2019-11-13 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (7.13 Å) 主引用文献 Structure of the RSC complex bound to the nucleosome. Science, 366, 2019
7K78	antibody and nucleosome complex 分子名称: Cse4, DNA (136-MER), Histone H2A.1, ... 著者 Ruifang, G, Yawen, B. 登録日 2020-09-22 公開日 2021-03-31 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation. Nat Commun, 12, 2021
1AE3	MUTANT R82C OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN) 分子名称: GENE V PROTEIN 著者 Su, S, Gao, Y.-G, Zhang, H, Terwilliger, T.C, Wang, A.H.-J. 登録日 1997-03-04 公開日 1997-09-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Analyses of the stability and function of three surface mutants (R82C, K69H, and L32R) of the gene V protein from Ff phage by X-ray crystallography. Protein Sci., 6, 1997
8A5R	Crystal structure of light-activated DNA-binding protein EL222 from Erythrobacter litoralis crystallized and measured in dark. 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ... 著者 Koval, T, Chaudhari, A, Fuertes, G, Andersson, I, Dohnalek, J. 登録日 2022-06-15 公開日 2023-07-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 EL222 from Erythrobacter litoralis. To Be Published
8A5S	Crystal structure of light-activated DNA-binding protein EL222 from Erythrobacter litoralis crystallized in dark, measured illuminated. 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ... 著者 Koval, T, Chaudhari, A, Fuertes, G, Andersson, I, Dohnalek, J. 登録日 2022-06-15 公開日 2023-07-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 EL222 from Erythrobacter litoralis. To Be Published
7UY5	Tetrahymena telomerase with CST 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 He, Y, Song, H, Chan, H, Wang, Y, Liu, B, Susac, L, Zhou, Z.H, Feigon, J. 登録日 2022-05-06 公開日 2022-07-13 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of Tetrahymena telomerase-bound CST with polymerase alpha-primase. Nature, 608, 2022
7UY6	Tetrahymena telomerase at 2.9 Angstrom resolution 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 He, Y, Song, H, Chan, H, Wang, Y, Liu, B, Susac, L, Zhou, Z.H, Feigon, J. 登録日 2022-05-06 公開日 2022-07-13 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structure of Tetrahymena telomerase-bound CST with polymerase alpha-primase. Nature, 608, 2022
7ET4	Crystal structure of Arabidopsis TEM1 AP2 domain 分子名称: AP2/ERF and B3 domain-containing transcription repressor TEM1, DNA (12-mer) 著者 Hu, H, Du, J. 登録日 2021-05-12 公開日 2021-09-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis. Proc.Natl.Acad.Sci.USA, 118, 2021
3UGO	Crystal structure of RNA-polymerase sigma subunit domain 2 complexed with -10 promoter element ssDNA oligo (TACAAT) 分子名称: 5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3', POTASSIUM ION, RNA polymerase sigma factor 著者 Feklistov, A, Darst, S.A. 登録日 2011-11-02 公開日 2011-12-07 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.096 Å) 主引用文献 Structural basis for promoter-10 element recognition by the bacterial RNA polymerase sigma subunit. Cell(Cambridge,Mass.), 147, 2011
3QSB	Structure of E. coli polIIIbeta with (Z)-5-(1-((4'-Fluorobiphenyl-4-yl)methoxyimino)butyl)-2,2-dimethyl-4,6-dioxocyclohexanecarbonitrile 分子名称: (1R,5R)-5-{(1Z)-N-[(4'-fluorobiphenyl-4-yl)methoxy]butanimidoyl}-2,2-dimethyl-4,6-dioxocyclohexanecarbonitrile, DNA polymerase III subunit beta 著者 Wijffels, G, Johnson, W.M, Oakley, A.J, Turner, K, Epa, V.C, Briscoe, S.J, Polley, M, Liepa, A.J, Hofmann, A, Buchardt, J, Christensen, C, Prosselkov, P, Dalrymple, B.P, Alewood, P.F, Jennings, P.A, Dixon, N.E, Winkler, D.A. 登録日 2011-02-20 公開日 2011-06-08 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Binding inhibitors of the bacterial sliding clamp by design J.Med.Chem., 54, 2011
1AE2	MUTANT L32R OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN) 分子名称: GENE V PROTEIN 著者 Su, S, Gao, Y.-G, Zhang, H, Terwilliger, T.C, Wang, A.H.-J. 登録日 1997-03-04 公開日 1997-09-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Analyses of the stability and function of three surface mutants (R82C, K69H, and L32R) of the gene V protein from Ff phage by X-ray crystallography. Protein Sci., 6, 1997
5GT3	Crystal structure of nucleosome particle in the presence of human testis-specific histone variant, hTh2b 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-D, ... 著者 Kumarevel, T, Sivaraman, P. 登録日 2016-08-18 公開日 2017-02-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.91 Å) 主引用文献 Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b Biophys. Chem., 221, 2017
6C2S	Transcriptional repressor, CouR, bound to a 23-mer DNA duplex 分子名称: 23-mer, Transcriptional regulator, MarR family 著者 Cogan, D.P, Nair, S.K. 登録日 2018-01-08 公開日 2018-05-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris. J. Biol. Chem., 293, 2018
5C5J	Poymerase Nucleotide complex 分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase IV, ... 著者 Nair, D.T, Kottur, J. 登録日 2015-06-20 公開日 2016-06-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Reactive Oxygen Species Play an Important Role in the Bactericidal Activity of Quinolone Antibiotics Angew.Chem.Int.Ed.Engl., 55, 2016
4A12	Structure of the global transcription regulator FapR from Staphylococcus aureus in complex with DNA operator 分子名称: FAPR PROMOTER, TRANSCRIPTION FACTOR FAPR 著者 Albanesi, D, Guerin, M.E, Buschiazzo, A, de Mendoza, D, Alzari, P.M. 登録日 2011-09-13 公開日 2012-09-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural Basis for Feed-Forward Transcriptional Regulation of Membrane Lipid Homeostasis in Staphylococcus Aureus. Plos Pathog., 9, 2013
6ZWT	Crystal structure of DNA-binding domain of OmpR of two-component system of Acinetobacter baumannii 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... 著者 Narwal, M, Lucchini, V, Trebosc, V, Gartenmann, S, Pieren, M, Kemmer, C, Kammerer, R.A. 登録日 2020-07-28 公開日 2021-08-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Targeting virulence regulation to disarm Acinetobacter baumannii pathogenesis. Virulence, 13, 2022
2BKE	Conformational Flexibility Revealed by the Crystal Structure of a Crenarchaeal RadA 分子名称: CHLORIDE ION, DNA REPAIR AND RECOMBINATION PROTEIN RADA 著者 Ariza, A, Richard, D.L, White, M.F, Bond, C.S. 登録日 2005-02-15 公開日 2005-03-16 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Conformational Flexibility Revealed by the Crystal Structure of a Crenarchaeal Rada Nucleic Acids Res., 33, 2005
7TC3	Human APE1 in the apo form 分子名称: 1,2-ETHANEDIOL, DNA-(apurinic or apyrimidinic site) endonuclease, mitochondrial 著者 Pidugu, L.S, Pozharski, E, Drohat, A.C. 登録日 2021-12-22 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.252 Å) 主引用文献 Characterizing inhibitors of human AP endonuclease 1. Plos One, 18, 2023
7TC2	Human APE1 in complex with 5-nitroindole-2-carboxylic acid 分子名称: 1,2-ETHANEDIOL, 5-nitro-1H-indole-2-carboxylic acid, DI(HYDROXYETHYL)ETHER, ... 著者 Pidugu, L.S, Pozharski, E, Drohat, A.C. 登録日 2021-12-22 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Characterizing inhibitors of human AP endonuclease 1. Plos One, 18, 2023

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