PDB: 226262 件ウェブページステータス検索Chemie searchBIRD

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3DFP	Phosphate ions in D33N mutant fructose-1,6-bisphosphate aldolase from rabbit muscle 分子名称: Fructose-bisphosphate aldolase A, PHOSPHATE ION 著者 St-Jean, M, Sygusch, J. 登録日 2008-06-12 公開日 2009-04-28 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Charge stabilization and entropy reduction of central lysine residues in fructose-bisphosphate aldolase Biochemistry, 48, 2009
3LZL	Crystal Structure Analysis of the as-solated P19 protein from Campylobacter jejuni at 1.45 A at pH 9.0 分子名称: COPPER (II) ION, P19 protein, SULFATE ION 著者 Doukov, T.I, Chan, A.C.K, Scofield, M, Ramin, A.B, Tom-Yew, S.A.L, Murphy, M.E.P. 登録日 2010-03-01 公開日 2010-07-21 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure and Function of P19, a High-Affinity Iron Transporter of the Human Pathogen Campylobacter jejuni. J.Mol.Biol., 401, 2010
3DNB	HELIX GEOMETRY, HYDRATION, AND G.A MISMATCH IN A B-DNA DECAMER 分子名称: DNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*TP*GP*G)-3'), MAGNESIUM ION 著者 Prive, G.G, Dickerson, R.E. 登録日 1988-03-18 公開日 1989-01-09 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G. J.Mol.Biol., 217, 1991
3LZT	REFINEMENT OF TRICLINIC LYSOZYME AT ATOMIC RESOLUTION 分子名称: ACETATE ION, LYSOZYME, NITRATE ION 著者 Walsh, M.A, Schneider, T, Sieker, L.C, Dauter, Z, Lamzin, V, Wilson, K.S. 登録日 1997-03-23 公開日 1998-03-25 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (0.925 Å) 主引用文献 Refinement of triclinic hen egg-white lysozyme at atomic resolution. Acta Crystallogr.,Sect.D, 54, 1998
3DNG	Crystal structure of the complex between MMP-8 and a non-zinc chelating inhibitor 分子名称: (5S)-5-(2-amino-2-oxoethyl)-4-oxo-N-[(3-oxo-3,4-dihydro-2H-1,4-benzoxazin-6-yl)methyl]-3,4,5,6,7,8-hexahydro[1]benzothieno[2,3-d]pyrimidine-2-carboxamide, CALCIUM ION, Neutrophil collagenase, ... 著者 Pochetti, G, Montanari, R, Mazza, F. 登録日 2008-07-02 公開日 2009-03-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Extra Binding Region Induced by Non-Zinc Chelating Inhibitors into the S(1)' Subsite of Matrix Metalloproteinase 8 (MMP-8) J.Med.Chem., 52, 2009
3MR2	Human DNA polymerase eta in complex with normal DNA and incoming nucleotide (Nrm) 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*T*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... 著者 Biertumpfel, C, Zhao, Y, Ramon-Maiques, S, Gregory, M.T, Lee, J.Y, Yang, W. 登録日 2010-04-28 公開日 2010-06-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structure and mechanism of human DNA polymerase eta. Nature, 465, 2010
3DNU	structure of MDT protein 分子名称: CHLORIDE ION, PHOSPHATE ION, Protein hipA 著者 schumacher, M.A. 登録日 2008-07-02 公開日 2009-01-27 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science, 323, 2009
4KIQ	Crystal structure of mitogen-activated protein kinase 14 (P38-H5) complex with ETHYL 6-((5-(CYCLOPROPYLCARBAMOYL)-2-METHYLPHENYL)CARBAMOYL)-1H-INDOLE-1-CARBOXYLATE 分子名称: Mitogen-activated protein kinase 14, ethyl 6-{[5-(cyclopropylcarbamoyl)-2-methylphenyl]carbamoyl}-1H-indole-1-carboxylate 著者 Sack, J.S, Tokarski, J.S. 登録日 2013-05-02 公開日 2013-06-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The Identification of Novel P38-Alpha Isoform Selective Kinase Inhibitors Having an Unprecedented P38-Alpha Binding Mode Bioorg.Med.Chem.Lett., 23, 2013
3DIM	Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Cs+ Soak 分子名称: CESIUM ION, ISOPROPYL ALCOHOL, LYSINE, ... 著者 Serganov, A.A. 登録日 2008-06-20 公開日 2008-09-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural insights into amino acid binding and gene control by a lysine riboswitch. Nature, 455, 2008
3DIW	c-terminal beta-catenin bound TIP-1 structure 分子名称: Tax1-binding protein 3, decameric peptide form Catenin beta-1 著者 Shen, Y. 登録日 2008-06-21 公開日 2008-10-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1 J.Mol.Biol., 384, 2008
3M9V	X-ray Structure of a KijD3 in Complex with dTDP 分子名称: FAD-dependent oxidoreductase, THYMIDINE-5'-DIPHOSPHATE 著者 Bruender, N.A, Thoden, J.B, Holden, H.M. 登録日 2010-03-22 公開日 2010-04-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 X-ray structure of kijd3, a key enzyme involved in the biosynthesis of D-kijanose. Biochemistry, 49, 2010
4KJZ	Crystal Structure of Thermus Thermophilus IF2, Apo and GDP-bound Forms (2-474) 分子名称: GUANOSINE-5'-DIPHOSPHATE, Translation initiation factor IF-2 著者 Eiler, D.R, Lin, J, Steitz, T.A. 登録日 2013-05-04 公開日 2013-09-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Initiation factor 2 crystal structure reveals a different domain organization from eukaryotic initiation factor 5B and mechanism among translational GTPases. Proc.Natl.Acad.Sci.USA, 110, 2013
4UH5	Structure of human nNOS R354A G357D mutant heme domain in complex with N1-(5-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)-N1,N2- dimethylethane-1,2-diamine 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, CHLORIDE ION, N1-(5-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)-N1,N2-dimethylethane-1,2-diamine, ... 著者 Li, H, Poulos, T.L. 登録日 2015-03-23 公開日 2015-07-15 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.983 Å) 主引用文献 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem., 58, 2015
5ZVV	Structure of SeMet-phAimR 分子名称: AimR transcriptional regulator, GLYCEROL 著者 Cheng, W, Dou, C. 登録日 2018-05-13 公開日 2018-09-05 最終更新日 2019-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and functional insights into the regulation of the lysis-lysogeny decision in viral communities. Nat Microbiol, 3, 2018
3D9K	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: CTD-PEPTIDE, RNA-binding protein 16, SULFATE ION 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3DJ2	Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Tl+ Soak 分子名称: ISOPROPYL ALCOHOL, LYSINE, RNA (174-MER), ... 著者 Serganov, A.A. 登録日 2008-06-21 公開日 2008-09-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into amino acid binding and gene control by a lysine riboswitch. Nature, 455, 2008
4K78	CFTR Associated Ligand (CAL) E317A PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL) 分子名称: Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-QDTRL peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2013-04-16 公開日 2014-01-22 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4UOX	Crystal structure of YgjG in complex with Pyridoxal-5'-phosphate and putrescine 分子名称: 1,4-DIAMINOBUTANE, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ... 著者 Jeong, J.H, Kim, Y.G. 登録日 2014-06-11 公開日 2014-12-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.085 Å) 主引用文献 Structure of Putrescine Aminotransferase from Escherichia Coli Provides Insights Into the Substrate Specificity Among Class III Aminotransferases. Plos One, 9, 2014
3MB2	Kinetic and Structural Characterization of a Heterohexamer 4-Oxalocrotonate Tautomerase from Chloroflexus aurantiacus J-10-fl: Implications for Functional and Structural Diversity in the Tautomerase Superfamily 分子名称: 4-oxalocrotonate tautomerase family enzyme - alpha subunit, 4-oxalocrotonate tautomerase family enzyme - beta subunit, SULFATE ION 著者 Burks, E.A, Fleming, C.D, Mesecar, A.D, Whitman, C.P, Pegan, S.D. 登録日 2010-03-24 公開日 2010-06-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Kinetic and structural characterization of a heterohexamer 4-oxalocrotonate tautomerase from Chloroflexus aurantiacus J-10-fl: implications for functional and structural diversity in the tautomerase superfamily Biochemistry, 49, 2010
4UHH	Structural studies of a thermophilic esterase from Thermogutta terrifontis (cacodylate complex) 分子名称: CACODYLIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Sayer, C, Isupov, M.N, Bonch-Osmolovskaya, E, Littlechild, J.A. 登録日 2015-03-24 公開日 2015-06-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.06 Å) 主引用文献 Structural Studies of a Thermophilic Esterase from a New Planctomycetes Species, Thermogutta Terrifontis. FEBS J., 282, 2015
4KL6	Crystal structure of dimeric form of NpuDnaE intein 分子名称: DNA-directed DNA polymerase,Nucleic acid binding, OB-fold, tRNA/helicase-type 著者 Aranko, A.S, Oeemig, J.S, Kajander, T, Iwai, H. 登録日 2013-05-07 公開日 2013-09-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Intermolecular domain swapping induces intein-mediated protein alternative splicing. Nat.Chem.Biol., 9, 2013
3DBJ	Allophycocyanin from Thermosynechococcus vulcanus 分子名称: Allophycocyanin, PHYCOCYANOBILIN 著者 Adir, N, Klartag, M, McGregor, A, David, L. 登録日 2008-06-01 公開日 2008-11-11 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Allophycocyanin Trimer Stability and Functionality Are Primarily Due to Polar Enhanced Hydrophobicity of the Phycocyanobilin Binding Pocket J.Mol.Biol., 384, 2008
4UIM	crystal structure of quinine-dependent Fab 314.3 分子名称: FAB 314.3, SULFATE ION 著者 Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A. 登録日 2015-03-30 公開日 2015-09-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3 Blood, 126, 2015
3MS9	ABL kinase in complex with imatinib and a fragment (FRAG1) in the myristate pocket 分子名称: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, CHLORIDE ION, Tyrosine-protein kinase ABL1, ... 著者 Cowan-Jacob, S.W, Rummel, G, Fendrich, G. 登録日 2010-04-29 公開日 2010-05-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Binding or bending: distinction of allosteric Abl kinase agonists from antagonists by an NMR-based conformational assay. J.Am.Chem.Soc., 132, 2010
4K8B	Crystal structure of HCV NS3/4A protease complexed with inhibitor 分子名称: N-(tert-butylcarbamoyl)-3-methyl-L-valyl-(4R)-N-[(1R,2S)-1-carboxy-2-ethenylcyclopropyl]-4-[(7-methoxy-2-phenylquinolin-4-yl)oxy]-L-prolinamide, NS3 protease, Nonstructural protein, ... 著者 Nar, H. 登録日 2013-04-18 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Ligand bioactive conformation plays a critical role in the design of drugs that target the hepatitis C virus NS3 protease. J.Med.Chem., 57, 2014

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