PDB: 217686 件ウェブページステータス検索Chemie searchBIRD

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8QXM	Cryo-EM structure of tetrameric human SAMHD1 State III - Relaxed 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ... 著者 Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A. 登録日 2023-10-24 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.94 Å) 主引用文献 Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis. Nat Commun, 15, 2024
8RHQ	Crystal structure of HLA-A*11:01 in complex with SVLNDIFSRL, an 10-mer epitope from SARS-CoV-2 Spike (S975-984) 分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, CHLORIDE ION, ... 著者 Ahn, Y.M, Maddumage, J.C, Szeto, C, Gras, S. 登録日 2023-12-16 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The impact of SARS-CoV-2 spike mutation on peptide presentation is HLA allomorph-specific. Curr Res Struct Biol, 7, 2024
8BZ5	Crystal structure of the L. monocytogenes RmlT in complex with HEPES 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glycosyltransferase 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2022-12-14 公開日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the L. monocytogenes RmlT in complex with HEPES To Be Published
8BZ8	Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose 分子名称: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, CHLORIDE ION, D(-)-TARTARIC ACID, ... 著者 Cereija, T.B, Morais-Cabral, J.H. 登録日 2022-12-14 公開日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose To Be Published
7RDY	SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - engaged class 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CHAPSO, ... 著者 Chen, J, Malone, B, Campbell, E.A, Darst, S.A. 登録日 2021-07-12 公開日 2021-12-01 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication-transcription complex. Nat.Struct.Mol.Biol., 29, 2022
7RE0	SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - swiveled class 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Helicase, ... 著者 Chen, J, Malone, B, Campbell, E.A, Darst, S.A. 登録日 2021-07-12 公開日 2021-12-01 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication-transcription complex. Nat.Struct.Mol.Biol., 29, 2022
5IPE	Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) nucleoside thiophosphoramidate catalytic product complex 分子名称: 1,2-ETHANEDIOL, 5'-S-phosphono-5'-thioguanosine, CHLORIDE ION, ... 著者 Maize, K.M, Finzel, B.C. 登録日 2016-03-09 公開日 2017-03-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Caught before Released: Structural Mapping of the Reaction Trajectory for the Sofosbuvir Activating Enzyme, Human Histidine Triad Nucleotide Binding Protein 1 (hHint1). Biochemistry, 56, 2017
8QXJ	Cryo-EM structure of tetrameric human SAMHD1 with dApNHpp 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION, ... 著者 Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A. 登録日 2023-10-24 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.65 Å) 主引用文献 Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis. Nat Commun, 15, 2024
5MDO	Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form I) 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Chitoporin, SODIUM ION 著者 Zahn, M, van den Berg, B. 登録日 2016-11-13 公開日 2017-12-20 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural basis for chitin acquisition by marine Vibrio species. Nat Commun, 9, 2018
7RDS	Structure of human NTHL1 分子名称: IRON/SULFUR CLUSTER, Isoform 3 of Endonuclease III-like protein 1 著者 Carroll, B.L, Zahn, K.E, Doublie, S. 登録日 2021-07-11 公開日 2021-12-29 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Caught in motion: human NTHL1 undergoes interdomain rearrangement necessary for catalysis. Nucleic Acids Res., 49, 2021
1CB8	CHONDROITINASE AC LYASE FROM FLAVOBACTERIUM HEPARINUM 分子名称: CALCIUM ION, GLYCEROL, PROTEIN (CHONDROITINASE AC), ... 著者 Fethiere, J, Eggimann, B, Cygler, M. 登録日 1999-03-02 公開日 1999-05-14 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of chondroitin AC lyase, a representative of a family of glycosaminoglycan degrading enzymes. J.Mol.Biol., 288, 1999
6U1L	Structure of two-domain translational regulator Yih1 reveals a possible mechanism of action 分子名称: Protein IMPACT homolog 著者 Harjes, E, Jameson, G.B, Edwards, P.J.B, Goroncy, A.K, Loo, T, Norris, G.E. 登録日 2019-08-16 公開日 2021-02-10 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Experimentally based structural model of Yih1 provides insight into its function in controlling the key translational regulator Gcn2. Febs Lett., 595, 2021
6U1O	Structure of two-domain translational regulator Yih1 reveals a possible mechanism of action 分子名称: Protein IMPACT homolog 著者 Harjes, E, Jameson, G.B, Edwards, P.J.B, Goroncy, A.K, Loo, T, Norris, G.E. 登録日 2019-08-16 公開日 2021-02-10 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Experimentally based structural model of Yih1 provides insight into its function in controlling the key translational regulator Gcn2. Febs Lett., 595, 2021
7RJZ	BthTX-II variant a, from Bothrops jararacussu venom, complexed with benzoic acid 分子名称: BENZOIC ACID, BthTX-IIa 著者 Borges, R.J, Fontes, M.R.M. 登録日 2021-07-21 公開日 2022-01-05 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 BthTX-II from Bothrops jararacussu venom has variants with different oligomeric assemblies: An example of snake venom phospholipases A 2 versatility. Int.J.Biol.Macromol., 191, 2021
6Z5X	The RSL - sulfonato-calix[8]arene complex, P213 form, acetate pH 4.8 分子名称: Fucose-binding lectin protein, SODIUM ION, SULFATE ION, ... 著者 Engilberge, S, Ramberg, K, Crowley, P.B. 登録日 2020-05-27 公開日 2021-04-07 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021
7ZMW	14-3-3s binding to non-natural peptide 2c 分子名称: 14-3-3 protein sigma, MAGNESIUM ION, non-natural peptide 1 著者 Somsen, B.A, Craenmehr, F.W.B, Ottmann, C. 登録日 2022-04-19 公開日 2022-11-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Functional mapping of the 14-3-3 hub protein as a guide to design 14-3-3 molecular glues. Chem Sci, 13, 2022
6NUK	De novo designed protein Ferredog-Diesel 分子名称: Ferredog-Diesel 著者 Koepnick, B, Bick, M.J, DiMaio, F, Norgard-Solano, T, Baker, D. 登録日 2019-02-01 公開日 2019-06-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 De novo protein design by citizen scientists. Nature, 570, 2019
6Q5G	The ABC transporter associated binding protein from B. animalis subsp. lactis Bl-04 without ligand. SeMet variant 分子名称: Sugar ABC transporter substrate-binding protein 著者 Fredslund, F, Lo Leggio, L. 登録日 2018-12-08 公開日 2019-06-19 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Substrate preference of an ABC importer corresponds to selective growth on beta-(1,6)-galactosides inBifidobacterium animalissubsp.lactis. J.Biol.Chem., 294, 2019
6Z5G	The RSL - sulfonato-calix[8]arene complex, I23 form, citrate pH 4.0, solved by S-SAD 分子名称: Fucose-binding lectin protein, GLYCEROL, beta-D-fructopyranose, ... 著者 Engilberge, S, Ramberg, K, Crowley, P.B. 登録日 2020-05-26 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.278 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021
6Z5M	The RSL - sulfonato-calix[8]arene complex, I23 form, Gly-HCl pH 2.2 分子名称: Fucose-binding lectin protein, GLYCEROL, beta-D-fructopyranose, ... 著者 Ramberg, K, Engilberge, S, Crowley, P.B. 登録日 2020-05-26 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021
6Z5W	The RSL - sulfonato-calix[8]arene complex, P213 form, MES pH 6.8 分子名称: Fucose-binding lectin protein, SULFATE ION, beta-D-fructopyranose, ... 著者 Engilberge, S, Ramberg, K, Crowley, P.B. 登録日 2020-05-27 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.187 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021
6TWN	Crystal structure of Talin1 R7R8 in complex with CDK1 (206-223) 分子名称: CHLORIDE ION, Cyclin-dependent kinase 1, GLYCEROL, ... 著者 Zacharchenko, T, Muench, S.P, Goult, B.T. 登録日 2020-01-13 公開日 2021-05-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Talin mechanosensitivity is modulated by a direct interaction with cyclin-dependent kinase-1. J.Biol.Chem., 297, 2021
6Z5Z	The RSL-R6 - sulfonato-calix[8]arene complex, P213 form, TRIS-HCl pH 8.5 分子名称: Fucose-binding lectin protein, beta-D-fructopyranose, sulfonato-calix[8]arene 著者 Ramberg, K, Engilberge, S, Crowley, P.B. 登録日 2020-05-27 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.124 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021
6Z60	The RSL - sulfonato-calix[8]arene complex, P213 form, CAPS pH 9.5 分子名称: Fucose-binding lectin protein, SULFATE ION, beta-D-fructopyranose, ... 著者 Ramberg, K, Engilberge, S, Crowley, P.B. 登録日 2020-05-27 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.166 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021
6Z62	The RSL - sulfonato-calix[8]arene complex, P213 form, TRIS-HCl pH 8.5 分子名称: Fucose-binding lectin protein, SULFATE ION, beta-D-fructopyranose, ... 著者 Ramberg, K, Engilberge, S, Crowley, P.B. 登録日 2020-05-27 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.156 Å) 主引用文献 Facile Fabrication of Protein-Macrocycle Frameworks. J.Am.Chem.Soc., 143, 2021

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