PDB: 226262 件ウェブページステータス検索Chemie searchBIRD

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2BRP	Crystal structure of S. pneumoniae hyaluronate lyase in complex with W249b 分子名称: D-xylose, HYALURONATE LYASE, SULFAMIC ACID 1-DECYL-2-(4-SULFAMOYLOXYPHENYL)-1H-INDOL-6-YL ESTER, ... 著者 Rigden, D.J, Jedrzejas, M.J. 登録日 2005-05-10 公開日 2006-04-24 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Design of new benzoxazole-2-thione-derived inhibitors of Streptococcus pneumoniae hyaluronan lyase: structure of a complex with a 2-phenylindole. Glycobiology, 16, 2006
6Q1C	Apo YfeA extracted from the E. coli periplasm 分子名称: Periplasmic chelated iron-binding protein YfeA 著者 Radka, C.D, Labiuk, S.L, DeLucas, L.J, Aller, S.G. 登録日 2019-08-03 公開日 2019-09-04 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structures of the substrate-binding protein YfeA in apo and zinc-reconstituted holo forms. Acta Crystallogr D Struct Biol, 75, 2019
4K73	X-ray crystal structure of an L,D-transpeptidase from Mycobacterium tuberculosis H37Rv 分子名称: CALCIUM ION, L,D-transpeptidase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2013-04-16 公開日 2013-06-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 X-ray crystal structure of an L,D-transpeptidase from Mycobacterium tuberculosis H37Rv (CASP Target) TO BE PUBLISHED
4K3Z	Crystal structure of D-erythrulose 4-phosphate dehydrogenase from Brucella melitensis, solved by iodide SAD 分子名称: 1,2-ETHANEDIOL, D-erythrulose 4-phosphate dehydrogenase, GLYCEROL 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2013-04-11 公開日 2013-05-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of D-erythrulose 4-phosphate dehydrogenase from Brucella melitensis, solved by iodide SAD To be Published
2BMK	Fab fragment of PLP-dependent catalytic antibody 15A9 in complex with phosphopyridoxyl-D-alanine 分子名称: FAB FRAGMENT OF CATALYTIC ANTIBODY 15A9, HEAVY CHAIN, LIGHT CHAIN, ... 著者 Golinelli-Pimpaneau, B, Christen, P. 登録日 2005-03-14 公開日 2006-03-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for D-amino acid transamination by the pyridoxal 5'-phosphate-dependent catalytic antibody 15A9. J. Biol. Chem., 281, 2006
4ARX	Lepidoptera-specific toxin Cry1Ac from Bacillus thuringiensis ssp. kurstaki HD-73 分子名称: 1,3-DIAMINOPROPANE, GLYCEROL, PESTICIDAL CRYSTAL PROTEIN CRY1AC 著者 Derbyshire, D.J, Carroll, J, Ellar, D.J, Li, J. 登録日 2012-04-27 公開日 2013-05-15 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural Basis of Galnac-Dependent Receptor Recognition by B. Thuringiensis Toxin Cry1Ac To be Published
7ZDN	Human Cyclophilin D in complex with fragment 分子名称: (1~{R},9~{R},10~{S})-12-oxa-8-azatricyclo[7.3.1.0^{2,7}]trideca-2(7),3,5-trien-10-ol, Peptidyl-prolyl cis-trans isomerase F, mitochondrial 著者 Silva, D.O, Graedler, U, Bandeiras, T.M. 登録日 2022-03-29 公開日 2023-04-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Human Cyclophilin D in complex with fragment To Be Published
1SJJ	Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin 分子名称: actinin 著者 Liu, J, Taylor, D.W, Taylor, K.A. 登録日 2004-03-03 公開日 2004-03-23 最終更新日 2024-02-14 実験手法 ELECTRON CRYSTALLOGRAPHY (20 Å) 主引用文献 A 3-D Reconstruction of Smooth Muscle alpha-Actinin by CryoEm Reveals Two Different Conformations at the Actin-binding Region. J.Mol.Biol., 338, 2004
4K0W	X-ray crystal structure of OXA-23 A220 duplication clinical variant 分子名称: 1,2-ETHANEDIOL, BICARBONATE ION, Beta-lactamase, ... 著者 Kaitany, K.J, Klinger, N.V, Leonard, D.A, Powers, R.A. 登録日 2013-04-04 公開日 2013-08-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structures of the Class D Carbapenemases OXA-23 and OXA-146: Mechanistic Basis of Activity against Carbapenems, Extended-Spectrum Cephalosporins, and Aztreonam. Antimicrob.Agents Chemother., 57, 2013
3D2K	Crystal structure of mouse Aurora A (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with [7-(2-{2-[3-(3-chloro-phenyl)-ureido]-thiazol-5-yl}-ethylamino)-pyrazolo[4,3-d]pyrimidin-1-yl]-acetic acid 分子名称: (7-{[2-(2-{[(3-chlorophenyl)carbamoyl]amino}-1,3-thiazol-5-yl)ethyl]amino}-1H-pyrazolo[4,3-d]pyrimidin-1-yl)acetic acid, serine/threonine kinase 6 著者 Elling, R.A, Oslob, J.D, Yu, C, Romanowski, M.J. 登録日 2008-05-08 公開日 2009-05-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Discovery of Aurora-A-selective inhibitors To be Published
4KCW	Pyruvate kinase (PYK) from Trypanosoma brucei soaked with oxalate 分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ... 著者 Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D. 登録日 2013-04-24 公開日 2014-01-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Pyruvate kinases have an intrinsic and conserved decarboxylase activity. Biochem.J., 458, 2014
4V3B	The structure of alpha2,3-sialyltransferase variant 1 from Pasteurella dagmatis in complex with the donor product CMP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, SIALYLTRANSFERASE 著者 Pavkov-Keller, T, Schmoelzer, K, Czabany, T, Luley-Goedl, C, Ribitsch, D, Schwab, H, Nidetzky, B, Gruber, K. 登録日 2014-10-17 公開日 2015-04-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Complete Switch from Alpha2,3- to Alpha2,6-Regioselectivity in Pasteurella Dagmatis Beta-D-Galactoside Sialyltransferase by Active-Site Redesign Chem.Commun.(Camb.), 51, 2015
4AUL	Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum 分子名称: CALCIUM ION, CATALASE-PHENOL OXIDASE, PROTOPORPHYRIN IX CONTAINING FE 著者 Yuzugullu, Y, Trinh, C.H, Smith, M.A, Pearson, A.R, Phillips, S.E.V, Sutay Kocabas, D, Bakir, U, Ogel, Z.B, McPherson, M.J. 登録日 2012-05-18 公開日 2013-02-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure, Recombinant Expression and Mutagenesis Studies of the Catalase with Oxidase Activity from Scytalidium Thermophilum Acta Crystallogr.,Sect.D, 69, 2013
4K9F	Neutron structure of Perdeuterated Rubredoxin refined against 1.75 resolution data collected on the new IMAGINE instrument at HFIR, ORNL 分子名称: FE (III) ION, Rubredoxin 著者 Munshi, P, Meilleur, F, Myles, D. 登録日 2013-04-19 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 NEUTRON DIFFRACTION (1.75 Å) 主引用文献 The IMAGINE instrument: first neutron protein structure and new capabilities for neutron macromolecular crystallography. Acta Crystallogr.,Sect.D, 69, 2013
4V39	Apo-structure of alpha2,3-sialyltransferase variant 2 from Pasteurella dagmatis 分子名称: SIALYLTRANSFERASE 著者 Pavkov-Keller, T, Schmoelzer, K, Czabany, T, Luley-Goedl, C, Ribitsch, D, Schwab, H, Nidetzky, B, Gruber, K. 登録日 2014-10-17 公開日 2015-04-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Complete Switch from Alpha2,3- to Alpha2,6-Regioselectivity in Pasteurella Dagmatis Beta-D-Galactoside Sialyltransferase by Active-Site Redesign Chem.Commun.(Camb.), 51, 2015
4C27	Crystal structure of Trypanosoma cruzi CYP51 bound to the inhibitor (R)-N-(3-(1H-indol-3-yl)-1-oxo-1-(pyridin-4-ylamino)propan-2-yl)-2-fluoro-4-(4-(4-(trifluoromethyl)phenyl)piperazin-1-yl)benzamide 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Nalpha-(2-fluoro-4-{4-[4-(trifluoromethyl)phenyl]piperazin-1-yl}benzoyl)-N-pyridin-4-yl-D-tryptophanamide, ... 著者 Vieira, D.F, Calvet, C.M, Choi, J.Y, Cameron, M.D, Gut, J, Kellar, D, Siqueira-Neto, J.L, McKerrow, J.H, Roush, W.R, Podust, L.M. 登録日 2013-08-16 公開日 2014-09-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Binding Mode and Potency of N-Indolyl-Oxopyridinyl-4-Amino-Propanyl-Based Inhibitors Targeting Trypanosoma Cruzi Cyp51 J.Med.Chem., 57, 2014
4K8G	Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G) 分子名称: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ... 著者 Lukk, T, Wichelecki, D, Gerlt, J.A, Nair, S.K. 登録日 2013-04-18 公開日 2013-05-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G) To be Published
4V3C	The structure of alpha2,3-sialyltransferase variant 2 from Pasteurella dagmatis in complex with the donor product CMP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, SIALYLTRANSFERASE 著者 Pavkov-Keller, T, Schmoelzer, K, Czabany, T, Luley-Goedl, C, Ribitsch, D, Schwab, H, Nidetzky, B, Gruber, K. 登録日 2014-10-17 公開日 2015-04-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Complete Switch from Alpha2,3- to Alpha2,6-Regioselectivity in Pasteurella Dagmatis Beta-D-Galactoside Sialyltransferase by Active-Site Redesign Chem.Commun.(Camb.), 51, 2015
1IV1	Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 著者 Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-11 公開日 2002-09-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
1S19	Crystal structure of VDR ligand binding domain complexed to calcipotriol. 分子名称: CALCIPOTRIOL, Vitamin D3 receptor 著者 Tocchini-Valentini, G, Rochel, N, Wurtz, J.M, Moras, D. 登録日 2004-01-06 公開日 2004-04-13 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of the vitamin D nuclear receptor liganded with the vitamin D side chain analogues calcipotriol and seocalcitol, receptor agonists of clinical importance. Insights into a structural basis for the switching of calcipotriol to a receptor antagonist by further side chain modification. J.Med.Chem., 47, 2004
8SG0	Crystal Structure of GDP-manose 3,5 epimerase de Myrciaria dubia in complex with substrate, product and NAD 分子名称: GDP-mannose 3,5-epimerase, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, GUANOSINE-5'-DIPHOSPHATE-BETA-L-GALACTOSE, ... 著者 Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C. 登録日 2023-04-11 公開日 2024-03-13 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Structural insights into the Smirnoff-Wheeler pathway for vitamin C production in the Amazon fruit camu-camu. J.Exp.Bot., 75, 2024
1S1O	NMR Structure of a D,L Alternating pentadecamer of norleucine: double antiparallel beta-helix 分子名称: BOC-L-NLE-(D-NLE-L-NLE)5-D-NLE(METHYL)-L-NLE-D-NLE-L-NLE METHYL ESTER 著者 Navarro, E, Fennude, E, Celda, B. 登録日 2004-01-07 公開日 2004-02-24 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of a D,L-alternating oligonorleucine as a model of double-stranded antiparallel beta-helix. Biopolymers, 64, 2002
1IV3	Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form MG atoms) 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MAGNESIUM ION 著者 Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-11 公開日 2002-09-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
1IV2	Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form CDP) 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-11 公開日 2002-09-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
8H4E	Blasnase-T13A/P55N with D-asn 分子名称: D-ASPARAGINE, FORMIC ACID, L-asparaginase, ... 著者 Lu, F, Wang, W, Chi, H, Ran, T. 登録日 2022-10-10 公開日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Structure-based rational design of Bacillus licheniformis L-asparaginase with low/no D-asparaginase activity for a safer enzyme To Be Published

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