Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UHR
DownloadVisualize
BU of 6uhr by Molmil
Crystal Structure of C148 mGFP-scDNA-2
分子名称: C148 mGFP-scDNA-2
著者Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
登録日2019-09-27
公開日2020-03-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHJ
DownloadVisualize
BU of 6uhj by Molmil
X-ray Structure of C148 mGFP
分子名称: C148 mGFP
著者Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
登録日2019-09-27
公開日2020-03-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHP
DownloadVisualize
BU of 6uhp by Molmil
Crystal Structure of C148 mGFP-ncDNA-1
分子名称: C148 mGFP-ncDNA-1
著者Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
登録日2019-09-27
公開日2020-03-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHL
DownloadVisualize
BU of 6uhl by Molmil
Crystal Structure of C148 mGFP-scDNA-1
分子名称: C148 mGFP-scDNA-1, UNKNOWN LIGAND
著者Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
登録日2019-09-27
公開日2020-03-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHM
DownloadVisualize
BU of 6uhm by Molmil
Crystal Structure of a Physical Mixture of C148 mGFP and scDNA-1
分子名称: C148 mGFP
著者Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
登録日2019-09-27
公開日2020-03-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHO
DownloadVisualize
BU of 6uho by Molmil
Crystal Structure of C148 mGFP-cDNA-2
分子名称: C148 mGFP-cDNA-2, UNKNOWN LIGAND
著者Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
登録日2019-09-27
公開日2020-03-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6R73
DownloadVisualize
BU of 6r73 by Molmil
Structure of IMP-13 metallo-beta-lactamase complexed with hydrolysed meropenem
分子名称: (2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-(dimethylcarbamoy l)pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, Beta-lactamase, ZINC ION
著者Softley, C.A, Zak, K, Kolonko, M, Sattler, M, Popowicz, G.
登録日2019-03-28
公開日2020-03-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Molecular Recognition Mechanism of IMP-13 Metallo-beta-Lactamase.
Antimicrob.Agents Chemother., 64, 2020
6L27
DownloadVisualize
BU of 6l27 by Molmil
X-ray crystal structure of the mutant green fluorescent protein
分子名称: Green fluorescent protein
著者Adachi, M, Shimizu, R, Shibazaki, C, Kagotani, Y, Ostermann, A, Schrader, T.E.
登録日2019-10-02
公開日2020-04-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.77 Å)
主引用文献Direct Observation of the Protonation States in the Mutant Green Fluorescent Protein.
J Phys Chem Lett, 11, 2020
6YAN
DownloadVisualize
BU of 6yan by Molmil
Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S12, 40S ribosomal protein S21, ...
著者Bochler, A, Simonetti, A, Guca, E, Hashem, Y.
登録日2020-03-12
公開日2020-04-08
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Structural Insights into the Mammalian Late-Stage Initiation Complexes.
Cell Rep, 31, 2020
6YI4
DownloadVisualize
BU of 6yi4 by Molmil
Structure of IMP-13 metallo-beta-lactamase complexed with citrate anion
分子名称: 1,2-ETHANEDIOL, ACETATE ION, BETA-MERCAPTOETHANOL, ...
著者Zak, K.M, Zhou, R.X, Softley, C.A, Bostock, M.J, Sattler, M, Popowicz, G.M.
登録日2020-03-31
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of IMP-13 metallo-beta-lactamase complexed with citrate anion
Not published
6YAL
DownloadVisualize
BU of 6yal by Molmil
Mammalian 48S late-stage initiation complex with beta-globin mRNA
分子名称: 18S ribosomal RNA, 40S Ribosomal protein uS3, 40S Ribosomal protein uS7, ...
著者Bochler, A, Simonetti, A, Guca, E, Hashem, Y.
登録日2020-03-12
公開日2020-04-08
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural Insights into the Mammalian Late-Stage Initiation Complexes.
Cell Rep, 31, 2020
6OGA
DownloadVisualize
BU of 6oga by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), H148D; circular permutant (50-51)
分子名称: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), ...
著者Lin, C.-Y, Boxer, S.G.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OGB
DownloadVisualize
BU of 6ogb by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51)
分子名称: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), ...
著者Lin, C.-Y, Boxer, S.G.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OGC
DownloadVisualize
BU of 6ogc by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(2,3-F2Y), H148D; circular permutant (50-51)
分子名称: Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(2,3-F2Y), H148D; circular permutant (50-51)
著者Lin, C.-Y, Boxer, S.G.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.178 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6L26
DownloadVisualize
BU of 6l26 by Molmil
Neutron crystal structure of the mutant green fluorescent protein (EGFP)
分子名称: Green fluorescent protein, trideuteriooxidanium
著者Adachi, M, Shimizu, R, Shibazaki, C, Kagotani, Y, Ostermann, A, Schrader, T.E.
登録日2019-10-02
公開日2020-04-08
最終更新日2023-11-22
実験手法NEUTRON DIFFRACTION (1.444 Å)
主引用文献Direct Observation of the Protonation States in the Mutant Green Fluorescent Protein.
J Phys Chem Lett, 11, 2020
6OG9
DownloadVisualize
BU of 6og9 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3,5-F2Y), H148D; circular permutant (50-51)
分子名称: Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3,5-F2Y), H148D; circular permutant (50-51)
著者Lin, C.-Y, Deng, A, Boxer, S.G.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OG8
DownloadVisualize
BU of 6og8 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D with globally incorporated 3-F1Y; circular permutant (50-51)
分子名称: Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D with globally incorporated 3-F1Y; circular permutant (50-51)
著者Lin, C.-Y, Deng, A, Boxer, S.G.
登録日2019-04-01
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6YAM
DownloadVisualize
BU of 6yam by Molmil
Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein eS1, 40S ribosomal protein eS10, ...
著者Bochler, A, Simonetti, A, Guca, E, Hashem, Y.
登録日2020-03-12
公開日2020-04-08
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural Insights into the Mammalian Late-Stage Initiation Complexes.
Cell Rep, 31, 2020
6HR1
DownloadVisualize
BU of 6hr1 by Molmil
Crystal structure of the YFPnano fusion protein
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Benoit, R.M.
登録日2018-09-26
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Chimeric single alpha-helical domains as rigid fusion protein connections for protein nanotechnology and structural biology.
Structure, 2021
6Y2L
DownloadVisualize
BU of 6y2l by Molmil
Structure of human ribosome in POST state
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A.
登録日2020-02-16
公開日2020-04-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes.
Cell Rep, 31, 2020
6XU4
DownloadVisualize
BU of 6xu4 by Molmil
Crystal structure of the genetically-encoded FGCaMP calcium indicator in its calcium-bound state
分子名称: CALCIUM ION, FGCamp
著者Boyko, K.M, Nikolaeva, A.Y, Korzhenevskiy, D.A, Barykina, N.V, Subach, O.M, Subach, F.V.
登録日2020-01-17
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献FGCaMP7, an Improved Version of Fungi-Based Ratiometric Calcium Indicator for In Vivo Visualization of Neuronal Activity.
Int J Mol Sci, 21, 2020
6Y0G
DownloadVisualize
BU of 6y0g by Molmil
Structure of human ribosome in classical-PRE state
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A.
登録日2020-02-07
公開日2020-04-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes.
Cell Rep, 31, 2020
6Y57
DownloadVisualize
BU of 6y57 by Molmil
Structure of human ribosome in hybrid-PRE state
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A.
登録日2020-02-25
公開日2020-04-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes.
Cell Rep, 31, 2020
6W2S
DownloadVisualize
BU of 6w2s by Molmil
Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1)
分子名称: 18S rRNA, CrPV 5'-UTR IRES, Eukaryotic translation initiation factor 3 subunit A, ...
著者Neupane, R, Pisareva, V, Rodriguez, C.F, Pisarev, A, Fernandez, I.S.
登録日2020-03-08
公開日2020-04-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate.
Elife, 9, 2020
6TB3
DownloadVisualize
BU of 6tb3 by Molmil
yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex
分子名称: 25S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Buschauer, R, Cheng, J, Berninghausen, O, Tesina, P, Becker, T, Beckmann, R.
登録日2019-10-31
公開日2020-04-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献The Ccr4-Not complex monitors the translating ribosome for codon optimality.
Science, 368, 2020

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon