PDB: 195 件ウェブページステータス検索Chemie searchBIRD

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6AIG	Crystal structure of PCNA1 from Aeropyrum pernix 分子名称: DNA polymerase sliding clamp 1 著者 Yamauchi, T, Kikuchi, M, Tsunoda, M. 登録日 2018-08-23 公開日 2018-09-26 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of PCNA1 from Aeropyrum pernix To Be Published
6HVO	Crystal structure of human PCNA in complex with three peptides of p12 subunit of human polymerase delta 分子名称: DNA polymerase delta subunit 4, Proliferating cell nuclear antigen, SULFATE ION 著者 Gonzalez-Magana, A, Romano-Moreno, M, Rojas, A.L, Blanco, F.J, De Biasio, A. 登録日 2018-10-11 公開日 2019-01-23 最終更新日 2019-03-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The p12 subunit of human polymerase delta uses an atypical PIP box for molecular recognition of proliferating cell nuclear antigen (PCNA). J.Biol.Chem., 294, 2019
6J0J	Crystal structure of Proliferating Cell Nuclear Antigen from Leishmania donovani with an unexplained density near residues Pro229,Pr0267 and Ala285 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Proliferating cell nuclear antigen 著者 Iqbal, N, Sharma, S, Singh, T.P. 登録日 2018-12-24 公開日 2019-01-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structure of Proliferating Cell Nuclear Antigen from Leishmania donovani with an unexplained density near residues Pro229,Pr0267 and Ala285 To Be Published
6QC0	PCNA complex with Cdt2 C-terminal PIP-box peptide 分子名称: Denticleless protein homolog, Proliferating cell nuclear antigen 著者 Perrakis, A.P, von Castelmur, E. 登録日 2018-12-25 公開日 2019-01-23 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2E3 ligase activity to Cdt1. Life Sci Alliance, 1, 2018
6QCG	PCNA complex with Cdt1 N-terminal PIP-box peptide 分子名称: DNA replication factor Cdt1, Proliferating cell nuclear antigen 著者 Perrakis, A, von Castelmur, E. 登録日 2018-12-28 公開日 2019-01-23 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2E3 ligase activity to Cdt1. Life Sci Alliance, 1, 2018
6QH1	The structure of Schizosaccharomyces pombe PCNA in complex with an Spd1 derived peptide 分子名称: Proliferating cell nuclear antigen, S-phase delaying protein 1 著者 Kragelund, B.B, Nielsen, O, Olsen, J.G, Kassem, N, Prestel, A. 登録日 2019-01-14 公開日 2020-02-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The structure of Schizosaccharomyces pombe PCNA in complex with an Spd1 derived peptide To Be Published
6O09	Structure of AtPCNA in complex with the PIP motif of ATXR6 分子名称: Proliferating cellular nuclear antigen 1, Uncharacterized protein 著者 Couture, J.F, Davarinejad, H. 登録日 2019-02-15 公開日 2019-03-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 ATXR5/6 Forms Alternative Protein Complexes with PCNA and the Nucleosome Core Particle. J. Mol. Biol., 431, 2019
6K2M	Crystal structure of the complex of Proliferating Cell Nuclear Antigen from Leishmania donovani with arginine at 3.19 A resolution. 分子名称: ARGININE, Proliferating cell nuclear antigen 著者 Viswanathan, V, Iqbal, N, Sharma, S, Singh, T.P. 登録日 2019-05-15 公開日 2019-05-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Crystal structure of the complex of Proliferating Cell Nuclear Antigen from Leishmania donovani with arginine at 3.19 A resolution. To Be Published
6K3A	Crystal structure of human PCNA in complex with DNMT1 PIP box motif. 分子名称: Peptide from DNA (cytosine-5)-methyltransferase 1, Proliferating cell nuclear antigen 著者 Jimenji, T, Kori, S, Arita, K. 登録日 2019-05-17 公開日 2019-06-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of PCNA in complex with DNMT1 PIP box reveals the basis for the molecular mechanism of the interaction. Biochem.Biophys.Res.Commun., 516, 2019
6S1N	Human polymerase delta holoenzyme Conformer 2 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-06-19 公開日 2019-12-25 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.86 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6S1O	Human polymerase delta holoenzyme Conformer 3 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-06-19 公開日 2019-12-25 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6S1M	Human polymerase delta holoenzyme Conformer 1 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-06-19 公開日 2019-12-25 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.27 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6KNC	PolD-PCNA-DNA (form B) 分子名称: DNA polymerase D DP2 (DNA polymerase II large) subunit, DNA polymerase II small subunit, DNA polymerase sliding clamp 1, ... 著者 Mayanagi, K, Oki, K, Miyazaki, N, Ishino, S, Yamagami, T, Iwasaki, K, Kohda, D, Morikawa, K, Shirai, T, Ishino, Y. 登録日 2019-08-05 公開日 2020-08-05 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (9.3 Å) 主引用文献 Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy. Bmc Biol., 18, 2020
6KNB	PolD-PCNA-DNA (form A) 分子名称: DNA polymerase D DP2 (DNA polymerase II large) subunit, DNA polymerase II small subunit, DNA polymerase sliding clamp 1, ... 著者 Mayanagi, K, Oki, K, Miyazaki, N, Ishino, S, Yamagami, T, Iwasaki, K, Kohda, D, Morikawa, K, Shirai, T, Ishino, Y. 登録日 2019-08-05 公開日 2020-08-05 最終更新日 2021-02-17 実験手法 ELECTRON MICROSCOPY (6.9 Å) 主引用文献 Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy. Bmc Biol., 18, 2020
6T7Y	Structure of PCNA bound to cPIP motif of DP2 from P. abyssi 分子名称: DNA polymerase sliding clamp, cPIP motif from the DP2 large subunit of PolD 著者 Madru, C, Raia, P, Hugonneau Beaufet, I, Delarue, M, Carroni, M, Sauguet, L. 登録日 2019-10-23 公開日 2020-03-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis for the increased processivity of D-family DNA polymerases in complex with PCNA. Nat Commun, 11, 2020
6T7X	Crystal structure of PCNA from P. abyssi 分子名称: DNA polymerase sliding clamp 著者 Madru, C, Raia, P, Hugonneau Beaufet, I, Delarue, M, Carroni, M, Sauguet, L. 登録日 2019-10-23 公開日 2020-03-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for the increased processivity of D-family DNA polymerases in complex with PCNA. Nat Commun, 11, 2020
6T8H	Cryo-EM structure of the DNA-bound PolD-PCNA processive complex from P. abyssi 分子名称: DNA polymerase II small subunit, DNA polymerase sliding clamp, DNA primer, ... 著者 Madru, C, Raia, P, Hugonneau Beaufet, I, Pehau-Arnaudet, G, England, P, Lindhal, E, Delarue, M, Carroni, M, Sauguet, L. 登録日 2019-10-24 公開日 2020-03-04 最終更新日 2020-04-08 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 Structural basis for the increased processivity of D-family DNA polymerases in complex with PCNA. Nat Commun, 11, 2020
6TNY	Processive human polymerase delta holoenzyme 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-12-10 公開日 2019-12-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.08 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6TNZ	Human polymerase delta-FEN1-PCNA toolbelt 分子名称: DNA polymerase delta catalytic subunit, DNA polymerase delta subunit 2, DNA polymerase delta subunit 3, ... 著者 Lancey, C, Hamdan, S.M, De Biasio, A. 登録日 2019-12-10 公開日 2019-12-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.05 Å) 主引用文献 Structure of the processive human Pol delta holoenzyme. Nat Commun, 11, 2020
6VVO	Structure of the human clamp loader (Replication Factor C, RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen, PCNA) 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Gaubitz, C, Liu, X, Stone, N.P, Kelch, B.A. 登録日 2020-02-18 公開日 2020-02-26 最終更新日 2020-03-25 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of the human clamp loader bound to the sliding clamp: a further twist on AAA+ mechanism Biorxiv, 2020
6W9W	R80A PCNA mutant defective in BIR 分子名称: Proliferating cell nuclear antigen 著者 Ripley, B.M, Washington, M.T. 登録日 2020-03-23 公開日 2020-09-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural analysis of PCNA mutant proteins defective in BIR, FF248-249AA and R80A To be Published
6WAC	FF248-249AA PCNA mutant defective in BIR 分子名称: Proliferating cell nuclear antigen 著者 Ripley, B.M, Washington, M.T. 登録日 2020-03-25 公開日 2020-09-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural analysis of PCNA mutant proteins defective in BIR, FF248-249AA and R80A To be Published
7BUP	Crystal structure of PCNA from pathogenic yeast Candida albicans 分子名称: Proliferating cell nuclear antigen 著者 sundaram, R, Vasudevan, D. 登録日 2020-04-07 公開日 2021-02-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural analyses of PCNA from the fungal pathogen Candida albicans identify three regions with species-specific conformations. Febs Lett., 595, 2021
7KC0	Structure of the Saccharomyces cerevisiae replicative polymerase delta in complex with a primer/template and the PCNA clamp 分子名称: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA (25-MER), DNA (5'-D(P*AP*TP*GP*AP*CP*CP*AP*TP*GP*AP*TP*TP*AP*CP*GP*AP*AP*TP*TP*GP*C)-3'), ... 著者 Zheng, F, Georgescu, R, Li, H, O'Donnell, M.E. 登録日 2020-10-04 公開日 2020-12-02 最終更新日 2020-12-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of eukaryotic DNA polymerase delta bound to the PCNA clamp while encircling DNA. Proc.Natl.Acad.Sci.USA, 117, 2020
7KQ1	PCNA bound to truncated peptide mimetic 分子名称: LYS-ARG-ARG-GLN-THR-SER-MET-THR-ASP-PHE-TYR-HIS-SER-LYS-ARG, Proliferating cell nuclear antigen 著者 Vandborg, B.A, Bruning, J.B. 登録日 2020-11-13 公開日 2021-05-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Unlocking the PIP-box: A peptide library reveals interactions that drive high-affinity binding to human PCNA. J.Biol.Chem., 296, 2021

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