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5E11
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BU of 5e11 by Molmil
Second PDZ domain of Ligand of Numb protein X 2 by Laue crystallography (no electric field)
分子名称: Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
登録日2015-09-29
公開日2016-12-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E22
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BU of 5e22 by Molmil
The second PDZ domain of Ligand of Numb protein X 2 in the presence of an electric field of ~1 MV/cm along the crystallographic x axis, with eightfold extrapolation of structure factor differences.
分子名称: GLYCEROL, Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
登録日2015-09-30
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
4HOP
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BU of 4hop by Molmil
Crystal structure of the computationally designed NNOS-Syntrophin complex
分子名称: Alpha-1-syntrophin, Nitric oxide synthase, brain
著者Harwood, I.M, Melero, C, Ollikainen, N, Kortemme, T.
登録日2012-10-22
公開日2013-11-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Quantification of the transferability of a designed protein specificity switch reveals extensive epistasis in molecular recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
5TYT
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BU of 5tyt by Molmil
Crystal Structure of the PDZ domain of RhoGEF bound to CXCR2 C-terminal peptide
分子名称: Rho guanine nucleotide exchange factor 11, C-X-C chemokine receptor type 2 chimera
著者Spellmon, N, Holcomb, J, Niu, A, Choudhary, V, Sun, X, Brunzelle, J, Li, C, Yang, Z.
登録日2016-11-21
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structural basis of PDZ-mediated chemokine receptor CXCR2 scaffolding by guanine nucleotide exchange factor PDZ-RhoGEF.
Biochem. Biophys. Res. Commun., 485, 2017
5MZ7
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BU of 5mz7 by Molmil
Crystal Structure of the third PDZ domain from the synaptic protein PSD-95 with incorporated Azidohomoalanine
分子名称: Disks large homolog 4
著者Kudlinzki, D, Lehner, F, Witt, K, Linhard, V.L, Silvers, R, Schwalbe, H.
登録日2017-01-31
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Impact of Azidohomoalanine Incorporation on Protein Structure and Ligand Binding.
Chembiochem, 18, 2017
5V6B
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BU of 5v6b by Molmil
Crystal structure of GIPC1
分子名称: PDZ domain-containing protein GIPC1
著者Shang, G, Zhang, X.
登録日2017-03-16
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex.
Elife, 6, 2017
5VWK
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BU of 5vwk by Molmil
Crystal structure of human Scribble PDZ1:Beta-PIX complex
分子名称: Beta-PIX, Protein scribble homolog, SULFATE ION
著者Lim, K.Y.B, Kvansakul, M.
登録日2017-05-22
公開日2017-11-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for the differential interaction of Scribble PDZ domains with the guanine nucleotide exchange factor beta-PIX.
J. Biol. Chem., 292, 2017
5VWC
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BU of 5vwc by Molmil
Crystal structure of human Scribble PDZ1 domain
分子名称: 1,2-ETHANEDIOL, Protein scribble homolog
著者Lim, K.Y.B, Kvansakul, M.
登録日2017-05-21
公開日2017-11-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.911 Å)
主引用文献Structural basis for the differential interaction of Scribble PDZ domains with the guanine nucleotide exchange factor beta-PIX.
J. Biol. Chem., 292, 2017
5OAK
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BU of 5oak by Molmil
Structure of the dmPar3 PDZ1 domain in complex with the dmPar6 PBM
分子名称: Bazooka, isoform C,LD29223p, GLYCEROL
著者Bruekner, S.R, Wiesner, S.
登録日2017-06-22
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for the interaction between the cell polarity proteins Par3 and Par6.
Sci Signal, 11, 2018
5W72
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BU of 5w72 by Molmil
Impact of IR active probes on PDZ3 and its ligand binding studied by NMR and X-ray crystallography
分子名称: Disks large homolog 4
著者Lehner, F, Kudlinzki, D, Schwalbe, H, Silvers, R.
登録日2017-06-19
公開日2017-12-13
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Impact of Azidohomoalanine Incorporation on Protein Structure and Ligand Binding.
Chembiochem, 18, 2017
5VWI
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BU of 5vwi by Molmil
Crystal structure of human Scribble PDZ1:Beta-PIX complex
分子名称: Protein scribble homolog, beta-PIX
著者Lim, K.Y.B, Kvansakul, M.
登録日2017-05-22
公開日2017-11-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for the differential interaction of Scribble PDZ domains with the guanine nucleotide exchange factor beta-PIX.
J. Biol. Chem., 292, 2017
6LCA
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BU of 6lca by Molmil
Crystal structure of human Dishevelled1 PDZ domain homotrimer
分子名称: SULFATE ION, Segment polarity protein dishevelled homolog DVL-1
著者Yasukochi, S, Numoto, N, Tenno, N, Tenno, T, Ito, N, Hiroaki, H.
登録日2019-11-18
公開日2020-11-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human Dishevelled1 PDZ domain homotrimer
To Be Published
6V84
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BU of 6v84 by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAc
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, LyCALAc
著者Gill, N.P, Madden, D.R.
登録日2019-12-10
公開日2021-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAc
To Be Published
7XTY
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BU of 7xty by Molmil
Crystal Structure of the second PDZ domain from human PTPN13 in complex with APC peptide
分子名称: APC-peptide, Tyrosine-protein phosphatase non-receptor type 13
著者Jing, L.Q, Sun, X.N, Ma, W.H, Zhou, W.J, Wu, D.L.
登録日2022-05-18
公開日2023-05-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Targeting PTPN13 with 11 amino acid peptides of C-terminal APC prevents immune evasion of colorectal cancer
to be published
3VQF
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BU of 3vqf by Molmil
Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein
分子名称: E3 ubiquitin-protein ligase LNX
著者Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H.
登録日2012-03-22
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.199 Å)
主引用文献Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
6MTU
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BU of 6mtu by Molmil
Crystal structure of human Scribble PDZ1:pMCC complex
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Colorectal mutant cancer protein, ...
著者Caria, S, Stewart, B.Z, Humbert, P.O, Kvansakul, M.
登録日2018-10-22
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Structural analysis of phosphorylation-associated interactions of human MCC with Scribble PDZ domains.
Febs J., 286, 2019
3VQG
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BU of 3vqg by Molmil
Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein
分子名称: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION
著者Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H.
登録日2012-03-23
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
6MYF
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BU of 6myf by Molmil
Crystal structure of free human Scribble PDZ1 domain
分子名称: Protein scribble homolog
著者Sun, Y.J, Hou, T, Gakhar, L, Fuentes, E.J.
登録日2018-11-01
公開日2019-04-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献SGEF forms a complex with Scribble and Dlg1 and regulates epithelial junctions and contractility.
J.Cell Biol., 218, 2019
6X20
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BU of 6x20 by Molmil
PDZ domain from choanoflagellate GIPC (mbGIPC) bound to B1AR peptide
分子名称: mbGIPC protein
著者Gao, M, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020
6X22
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BU of 6x22 by Molmil
PDZ domain from choanoflagellate GIPC (mbGIPC) bound to GAIP peptide
分子名称: mbGIPC protein
著者Gao, M, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020
6X1N
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BU of 6x1n by Molmil
Crystal Structure of Choanoflagellate (Monosiga brevicollis) Dlg1 PDZ3 (mbDLG-3)
分子名称: GLYCEROL, mbDLG-3 protein
著者Mackley, I, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020
6NH9
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BU of 6nh9 by Molmil
Crystal structure of a human calcium/calmodulin dependent serine protein kinase (CASK) PDZ domain
分子名称: Peripheral plasma membrane protein CASK
著者Sun, Y.J, Gakhar, L, Fuentes, E.J.
登録日2018-12-21
公開日2019-12-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献CASK PDZ domain specificity
To be published
6X1X
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BU of 6x1x by Molmil
PDZ domain from choanoflagellate GIPC (mbGIPC)
分子名称: GLYCEROL, mbGIPC protein
著者Gao, M, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.198 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020
6NID
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BU of 6nid by Molmil
Crystal structure of a human calcium/calmodulin dependent serine protein kinase (CASK) PDZ domain in complex with Neurexin-1 peptide
分子名称: 1,2-ETHANEDIOL, Neurexin-1, Peripheral plasma membrane protein CASK
著者Sun, Y.J, Gakhar, L, Fuentes, E.J.
登録日2018-12-27
公開日2020-01-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献CASK PDZ domain specificity
To be published
6X23
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BU of 6x23 by Molmil
PDZ domain from choanoflagellate SHANK1 (mbSHANK1) bound to GIRK3 peptide
分子名称: G protein-activated inward rectifier potassium channel 3, mbSHANK1 protein
著者Gao, M, Mackley, I.G.P, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020

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件を2024-10-09に公開中

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