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6DHG
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RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.5 Angstrom resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Chatterjee, R, Young, I.D, Fuller, F.D, Lassalle, L, Ibrahim, M, Gul, S, Fransson, T, Brewster, A.S, Alonso-Mori, R, Hussein, R, Zhang, M, Douthit, L, de Lichtenberg, C, Cheah, M.H, Shevela, D, Wersig, J, Seufert, I, Sokaras, D, Pastor, E, Weninger, C, Kroll, T, Sierra, R.G, Aller, P, Butryn, A, Orville, A.M, Liang, M, Batyuk, A, Koglin, J.E, Carbajo, S, Boutet, S, Moriarty, N.W, Holton, J.M, Dobbek, H, Adams, P.D, Bergmann, U, Sauter, N.K, Zouni, A, Messinger, J, Yano, J, Yachandra, V.K.
登録日2018-05-20
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
6DHO
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RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.07 Angstrom resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Chatterjee, R, Young, I.D, Fuller, F.D, Lassalle, L, Ibrahim, M, Gul, S, Fransson, T, Brewster, A.S, Alonso-Mori, R, Hussein, R, Zhang, M, Douthit, L, de Lichtenberg, C, Cheah, M.H, Shevela, D, Wersig, J, Seufert, I, Sokaras, D, Pastor, E, Weninger, C, Kroll, T, Sierra, R.G, Aller, P, Butryn, A, Orville, A.M, Liang, M, Batyuk, A, Koglin, J.E, Carbajo, S, Boutet, S, Moriarty, N.W, Holton, J.M, Dobbek, H, Adams, P.D, Bergmann, U, Sauter, N.K, Zouni, A, Messinger, J, Yano, J, Yachandra, V.K.
登録日2018-05-20
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
6DHE
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RT XFEL structure of the dark-stable state of Photosystem II (0F, S1-rich) at 2.05 Angstrom resolution
分子名称: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Kern, J, Chatterjee, R, Young, I.D, Fuller, F.D, Lassalle, L, Ibrahim, M, Gul, S, Fransson, T, Brewster, A.S, Alonso-Mori, R, Hussein, R, Zhang, M, Douthit, L, de Lichtenberg, C, Cheah, M.H, Shevela, D, Wersig, J, Seufert, I, Sokaras, D, Pastor, E, Weninger, C, Kroll, T, Sierra, R.G, Aller, P, Butryn, A, Orville, A.M, Liang, M, Batyuk, A, Koglin, J.E, Carbajo, S, Boutet, S, Moriarty, N.W, Holton, J.M, Dobbek, H, Adams, P.D, Bergmann, U, Sauter, N.K, Zouni, A, Messinger, J, Yano, J, Yachandra, V.K.
登録日2018-05-20
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
1R5P
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BU of 1r5p by Molmil
Crystal Structure Analysis of KaiB from PCC7120
分子名称: circadian oscillation regulator
著者Garces, R.G, Wu, N, Gillon, W, Pai, E.F.
登録日2003-10-12
公開日2004-05-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC
Embo J., 23, 2004
1R5Q
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Crystal Structure Analysis of Kai A from PCC7120
分子名称: circadian oscillation regulator
著者Garces, R.G, Wu, N, Gillon, W, Pai, E.F.
登録日2003-10-12
公開日2004-05-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC
Embo J., 23, 2004
5N8Y
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BU of 5n8y by Molmil
KaiCBA circadian clock backbone model based on a Cryo-EM density
分子名称: Circadian clock protein KaiA, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
著者Schuller, J.M, Snijder, J, Loessl, P, Heck, A.J.R, Foerster, F.
登録日2017-02-24
公開日2017-03-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structures of the cyanobacterial circadian oscillator frozen in a fully assembled state.
Science, 355, 2017
5YZ8
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Crystal Structure of N-terminal C1 domain of KaiC
分子名称: CHLORIDE ION, Circadian Clock Protein Kinase KaiC, MAGNESIUM ION, ...
著者Mukaiyama, A, Furuike, Y, Abe, J, Akiyama, S.
登録日2017-12-13
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB.
Sci Rep, 8, 2018
8WV8
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BU of 8wv8 by Molmil
Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, MAGNESIUM ION
著者Furuike, Y, Akiyama, S.
登録日2023-10-23
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Structure-function relationship of KaiC around dawn
Biophys Physicobio., 20, 2023
8WVE
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BU of 8wve by Molmil
Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, MAGNESIUM ION
著者Furuike, Y, Akiyama, S.
登録日2023-10-23
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.729 Å)
主引用文献Structure-function relationship of KaiC around dawn
Biophys Physicobio., 20, 2023
4KSO
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BU of 4kso by Molmil
Crystal Structure of Circadian clock protein KaiB from S.Elongatus
分子名称: Circadian clock protein KaiB
著者Pattanayek, R, Egli, M.
登録日2013-05-17
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.622 Å)
主引用文献CryoEM and Molecular Dynamics of the Circadian KaiB-KaiC Complex Indicates KaiB Monomers Interact with KaiC and Block ATP Binding Clefts.
J.Mol.Biol., 425, 2013
4U8H
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BU of 4u8h by Molmil
Crystal Structure of Mammalian Period-Cryptochrome Complex
分子名称: Cryptochrome-2, Period circadian protein homolog 2, ZINC ION
著者Nangle, S.N, Rosensweig, C, Koike, N, Tei, H, Takahashi, J.S, Green, C.B, Zheng, N.
登録日2014-08-03
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.798 Å)
主引用文献Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex.
Elife, 3, 2014
6K0R
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BU of 6k0r by Molmil
Ruvbl1-Ruvbl2 with truncated domain II in complex with phosphorylated Cordycepin
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Zhang, W, Chen, L, Li, W, Ju, D, Huang, N, Zhang, E.
登録日2019-05-07
公開日2020-05-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Chemical perturbations reveal that RUVBL2 regulates the circadian phase in mammals.
Sci Transl Med, 12, 2020
6WLP
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BU of 6wlp by Molmil
Crystal Structure of the ZTL light-state mimic G46S
分子名称: 1,2-ETHANEDIOL, Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Green, R.
登録日2020-04-20
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Steric and Electronic Interactions at Gln154 in ZEITLUPE Induce Reorganization of the LOV Domain Dimer Interface.
Biochemistry, 60, 2021
6WTB
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BU of 6wtb by Molmil
Sort-Tagged Drosophila Cryptochrome
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
著者Schneps, C.M, Crane, B.R.
登録日2020-05-02
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Tuning flavin environment to detect and control light-induced conformational switching in Drosophila cryptochrome.
Commun Biol, 4, 2021
5SVV
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BU of 5svv by Molmil
Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
分子名称: ACETATE ION, Adagio protein 1, FLAVIN MONONUCLEOTIDE, ...
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-07
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
5SVW
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Light-state Structure of Arabidopsis Thaliana Zeitlupe
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-07
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
5SVU
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BU of 5svu by Molmil
Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-07
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
5SVG
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BU of 5svg by Molmil
Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-05
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
7WVA
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BU of 7wva by Molmil
Crystal structure of mouse Cryptochrome 1 in complex with TH401 compound
分子名称: 2-(1-methylbenzimidazol-2-yl)sulfanyl-N-[(E)-(2,3,4-trimethoxyphenyl)methylideneamino]ethanamide, Cryptochrome-1
著者Miller, S.A, Hirota, T.
登録日2022-02-10
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A methylbenzimidazole derivative regulates mammalian circadian rhythms by targeting Cryptochrome proteins.
F1000Res, 11, 2022
6LUE
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Crystal structure of mouse Cryptochrome 1 in complex with compound KL201
分子名称: 2-bromanyl-N-(5,6,7,8-tetrahydro-[1]benzothiolo[2,3-d]pyrimidin-4-yl)benzamide, Cryptochrome-1
著者Miller, S, Aikawa, Y, Hirota, T.
登録日2020-01-27
公開日2020-06-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An Isoform-Selective Modulator of Cryptochrome 1 Regulates Circadian Rhythms in Mammals.
Cell Chem Biol, 27, 2020
3RTY
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BU of 3rty by Molmil
Structure of an Enclosed Dimer Formed by The Drosophila Period Protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Period circadian protein
著者King, H.A, Hoelz, A, Crane, B.R, Young, M.W.
登録日2011-05-04
公開日2011-12-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of an enclosed dimer formed by the Drosophila period protein.
J.Mol.Biol., 413, 2011
2PD8
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1.8 Angstrom Crystal Structure of the Cys71Ser mutant of Vivid
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Vivid PAS protein VVD
著者Zoltowski, B.D, Crane, B.R, Bilwes, A.M.
登録日2007-03-31
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Conformational switching in the fungal light sensor Vivid
Science, 316, 2007
2PD7
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2.0 Angstrom Crystal Structure of the Fungal Blue-Light Photoreceptor Vivid
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Vivid PAS protein VVD
著者Zoltowski, B.D, Crane, B.R, Bilwes, A.M.
登録日2007-03-31
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational switching in the fungal light sensor Vivid
Science, 316, 2007
2PDR
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1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Vivid PAS protein VVD
著者Zoltowski, B.D, Crane, B.R, Bilwes, A.M.
登録日2007-04-01
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational switching in the fungal light sensor Vivid
Science, 316, 2007
6QEC
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DNA binding domain of LUX ARRYTHMO in complex with DNA
分子名称: DNA (5'-D(*AP*TP*TP*CP*GP*AP*AP*TP*AP*T*TP*AP*TP*AP*TP*TP*CP*GP*AP*A)-3'), GLYCEROL, Transcription factor LUX
著者Zubieta, C, Nayak, A.
登録日2019-01-07
公開日2020-02-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular mechanisms of Evening Complex activity inArabidopsis.
Proc.Natl.Acad.Sci.USA, 117, 2020

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