PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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2V0R	crystal structure of a hairpin exchange variant (LTx) of the targeting LINE-1 retrotransposon endonuclease 分子名称: LTX, SULFATE ION 著者 Repanas, K, Zingler, N, Layer, L.E, Schumann, G.G, Perrakis, A, Weichenrieder, O. 登録日 2007-05-17 公開日 2007-07-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Determinants for DNA Target Structure Selectivity of the Human Line-1 Retrotransposon Endonuclease Nucleic Acids Res., 35, 2007
6GT7	NMR structure of the free helix bundle domain from the functional pRN1 primase 分子名称: functional pRN1 primase 著者 Boudet, J, Lipps, G, Allain, F. 登録日 2018-06-15 公開日 2018-12-26 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template. Cell, 176, 2019
4BEB	MUTANT (K220E) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, TYPE I RESTRICTION ENZYME HSDR 著者 Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R. 登録日 2013-03-07 公開日 2014-03-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.989 Å) 主引用文献 Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme. Plos One, 10, 2015
1D4B	CIDE-N DOMAIN OF HUMAN CIDE-B 分子名称: HUMAN CELL DEATH-INDUCING EFFECTOR B 著者 Lugovskoy, A, Zhou, P, Chou, J, McCarty, J, Li, P, Wagner, G. 登録日 1999-10-02 公開日 1999-12-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the CIDE-N domain of CIDE-B and a model for CIDE-N/CIDE-N interactions in the DNA fragmentation pathway of apoptosis. Cell(Cambridge,Mass.), 99, 1999
6IBC	Thermophage P23-45 procapsid 分子名称: Major head protein 著者 Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A. 登録日 2018-11-29 公開日 2019-02-13 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.39 Å) 主引用文献 Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5DMP	Structure of the Archaeal NHEJ Phosphoesterase from Methanocella paludicola. 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Uncharacterized protein, ... 著者 Brissett, N.C, Bartlett, E.J, Doherty, A.J. 登録日 2015-09-09 公開日 2015-10-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.793 Å) 主引用文献 Molecular basis for DNA strand displacement by NHEJ repair polymerases. Nucleic Acids Res., 44, 2016
1JUA	Solution Structure of the Deoxyribose HIV-1Lai Initiation Sequence Stable Dimer 分子名称: 5'-D(*CP*TP*TP*GP*CP*TP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' 著者 Barbault, F, Huynh-Dinh, T, Paoletti, J, Lancelot, G. 登録日 2001-08-24 公開日 2004-01-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A new peculiar DNA structure: NMR solution structure of a DNA kissing complex. J.Biomol.Struct.Dyn., 19, 2002
1Z6A	Sulfolobus solfataricus SWI2/SNF2 ATPase core domain 分子名称: Helicase of the snf2/rad54 family, MERCURY (II) ION, PHOSPHATE ION 著者 Duerr, H, Koerner, C, Mueller, M, Hickmann, V, Hopfner, K.P. 登録日 2005-03-22 公開日 2005-05-03 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 X-ray structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA Cell(Cambridge,Mass.), 121, 2005
6ES8	HIV capsid hexamer with IP6 ligand 分子名称: Gag protein, INOSITOL HEXAKISPHOSPHATE 著者 James, L.C. 登録日 2017-10-19 公開日 2018-08-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 IP6 is an HIV pocket factor that prevents capsid collapse and promotes DNA synthesis. Elife, 7, 2018
2LQ6	Solution structure of BRD1 PHD2 finger 分子名称: Bromodomain-containing protein 1, ZINC ION 著者 Liu, L, Wu, J. 登録日 2012-02-25 公開日 2012-10-24 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of an atypical PHD finger in BRPF2 and its interaction with DNA J.Struct.Biol., 180, 2012
4C8H	Crystal structure of the C-terminal region of yeast Ctf4, selenomethionine protein. 分子名称: CTF4 著者 Simon, A.C, Pellegrini, L. 登録日 2013-10-01 公開日 2014-04-30 最終更新日 2014-06-18 実験手法 X-RAY DIFFRACTION (2.691 Å) 主引用文献 A Ctf4 Trimer Couples the Cmg Helicase to DNA Polymerase Alpha in the Eukaryotic Replisome Nature, 510, 2014
5BQ5	Crystal structure of the IstB AAA+ domain bound to ADP-BeF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Insertion sequence IS5376 putative ATP-binding protein, ... 著者 Arias-Palomo, E, Berger, J.M. 登録日 2015-05-28 公開日 2015-09-02 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 An Atypical AAA+ ATPase Assembly Controls Efficient Transposition through DNA Remodeling and Transposase Recruitment. Cell, 162, 2015
6EIH	The crystal structure of 14-3-3 epsilon in complex with the phosphorylated NELFE peptide 分子名称: 14-3-3 protein epsilon, SER-ILE-SEP-ARG 著者 Akutsu, M, Wagner, S.A, Beli, P. 登録日 2017-09-19 公開日 2018-02-14 最終更新日 2019-10-16 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 p38-MK2 signaling axis regulates RNA metabolism after UV-light-induced DNA damage. Nat Commun, 9, 2018
2MX0	Solution structure of HP0268 from Helicobacter pylori 分子名称: Uncharacterized protein HP_0268 著者 Lee, K.Y. 登録日 2014-12-05 公開日 2015-12-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure-based functional identification of Helicobacter pylori HP0268 as a nuclease with both DNA nicking and RNase activities Nucleic Acids Res., 43, 2015
6FLF	Deoxyguanylosuccinate synthase (DgsS) structure at 1.33 Angstrom resolution. 分子名称: Adenylosuccinate synthetase 著者 Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A. 登録日 2018-01-25 公開日 2019-06-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes. Science, 372, 2021
6FM1	Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATPanddGMP at 2.3 Angstrom resolution 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase, ... 著者 Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A. 登録日 2018-01-29 公開日 2019-06-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes. Science, 372, 2021
1S16	Crystal Structure of E. coli Topoisomerase IV ParE 43kDa subunit complexed with ADPNP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION, ... 著者 Wei, Y, Gross, C.H. 登録日 2004-01-05 公開日 2004-05-04 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of Escherichia coli topoisomerase IV ParE subunit (24 and 43 kilodaltons): a single residue dictates differences in novobiocin potency against topoisomerase IV and DNA gyrase. Antimicrob.Agents Chemother., 48, 2004
6FM0	Deoxyguanylosuccinate synthase (DgsS) and ATP structure at 1.7 Angstrom resolution 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase 著者 Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A. 登録日 2018-01-29 公開日 2019-06-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes. Science, 372, 2021
2N9E	Structure of SUMO-2 bound to phosphorylated RAP80 SIM 分子名称: BRCA1-A complex subunit RAP80, Small ubiquitin-related modifier 2 著者 Anamika, A, Spyracopoulos, L. 登録日 2015-11-15 公開日 2016-01-20 最終更新日 2016-03-23 実験手法 SOLUTION NMR 主引用文献 Molecular Basis for Phosphorylation-dependent SUMO Recognition by the DNA Repair Protein RAP80. J.Biol.Chem., 291, 2016
2LLA	NMR solution structure ensemble of domain 11 of the echidna M6P/IGF2R receptor 分子名称: Mannose-6-phosphate/insulin-like growth factor II receptor 著者 Strickland, M, Crump, M.P, Williams, C, Rezgui, D, Ellis, R.Z, Hoppe, H, Frago, S, Prince, S.N, Zaccheo, O.J, Forbes, B.E, Jones, E, Hassan, A.Z, Wattana-Amorn, P. 登録日 2011-11-05 公開日 2012-11-07 最終更新日 2012-12-12 実験手法 SOLUTION NMR 主引用文献 An exon splice enhancer primes IGF2:IGF2R binding site structure and function evolution. Science, 338, 2012
1XVK	X-ray structure of an Echinomycin-(GCGTACGC)2 complex 分子名称: 2-CARBOXYQUINOXALINE, 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3', ECHINOMYCIN, ... 著者 Cuesta-Seijo, J.A, Sheldrick, G.M. 登録日 2004-10-28 公開日 2005-04-12 最終更新日 2020-09-09 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Structures of Complexes between Echinomycin and Duplex DNA. Acta Crystallogr.,Sect.D, 61, 2005
1XVR	echinomycin (CGTACG)2 complex 分子名称: 2-CARBOXYQUINOXALINE, 5'-D(*CP*GP*TP*AP*CP*G)-3', ECHINOMYCIN, ... 著者 Cuesta-Seijo, J.A, Sheldrick, G.M. 登録日 2004-10-28 公開日 2005-04-12 最終更新日 2012-12-12 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structures of Complexes between Echinomycin and Duplex DNA. Acta Crystallogr.,Sect.D, 61, 2005
2GK4	The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae 分子名称: GLYCEROL, conserved hypothetical protein 著者 Kim, Y, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2006-03-31 公開日 2006-05-02 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae To be Published
1XVN	echinomycin (ACGTACGT)2 complex 分子名称: 2-CARBOXYQUINOXALINE, 5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3', ECHINOMYCIN, ... 著者 Cuesta-Seijo, J.A, Sheldrick, G.M. 登録日 2004-10-28 公開日 2005-04-12 最終更新日 2012-12-12 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structures of Complexes between Echinomycin and Duplex DNA. Acta Crystallogr.,Sect.D, 61, 2005
3KKR	Crystal structure of catalytic core domain of BIV integrase in crystal form I 分子名称: Integrase, NITRATE ION 著者 Shen, Y. 登録日 2009-11-06 公開日 2010-09-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.453 Å) 主引用文献 Crystal structures of catalytic core domain of BIV integrase: implications for the interaction between integrase and target DNA Protein Cell, 1, 2010

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