Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7JQR
DownloadVisualize
BU of 7jqr by Molmil
Abeta 16-36 beta-hairpin mimic with E22G Arctic mutation
分子名称: Abeta 16-36 beta-hairpin mimic VAL-ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLY-ORN-ALA-ILE-ILE-GLY-LEU-MET, IODIDE ION
著者Kreutzer, A.G, McKnelly, K.J, Nowick, J.S.
登録日2020-08-11
公開日2021-09-08
最終更新日2022-03-30
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Effects of Familial Alzheimer's Disease Mutations on the Assembly of a beta-Hairpin Peptide Derived from A beta 16-36 .
Biochemistry, 61, 2022
7JQT
DownloadVisualize
BU of 7jqt by Molmil
Abeta 16-36 beta-hairpin mimic with E22K Italian mutation
分子名称: Abeta 16-36 beta-hairpin mimic VAL-ORT-LYS-LEU-VAL-MEA-PHE-ALA-LYS-ORT-ALA-ILE-ILE-GLY-LEU-MET
著者Kreutzer, A.G, McKnelly, K.J, Nowick, J.S.
登録日2020-08-11
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Effects of Familial Alzheimer's Disease Mutations on the Assembly of a beta-Hairpin Peptide Derived from A beta 16-36 .
Biochemistry, 61, 2022
1WD1
DownloadVisualize
BU of 1wd1 by Molmil
Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
分子名称: 5'-D(*CP*CP*TP*AP*CP*GP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
著者Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
登録日2004-05-10
公開日2004-08-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
5XXD
DownloadVisualize
BU of 5xxd by Molmil
Crystal structure of SmyD3 in complex with covalent inhibitor 1
分子名称: S-ADENOSYLMETHIONINE, Smyd3 methyltransferase, ZINC ION, ...
著者Baburajendran, N, Anna E, J.
登録日2017-07-03
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.314 Å)
主引用文献Crystal structure of SmyD3 in complex with covalent inhibitor 1
To Be Published
5XWR
DownloadVisualize
BU of 5xwr by Molmil
Crystal Structure of RBBP4-peptide complex
分子名称: Histone-binding protein RBBP4, MET-SER-ARG-ARG-LYS-GLN-ALA-LYS-PRO-GLN-HIS-ILE
著者Jobichen, C, Lui, B.H, Daniel, G.T, Sivaraman, J.
登録日2017-06-30
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Targeting cancer addiction for SALL4 by shifting its transcriptome with a pharmacologic peptide.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1WM2
DownloadVisualize
BU of 1wm2 by Molmil
Crystal structure of human SUMO-2 protein
分子名称: Ubiquitin-like protein SMT3B
著者Huang, W.-C, Ko, T.-P, Li, S.S.-L, Wang, A.H.-J.
登録日2004-07-02
公開日2004-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution: implication on the functional differences of SUMO proteins
Eur.J.Biochem., 271, 2004
5I2I
DownloadVisualize
BU of 5i2i by Molmil
Structure of cetuximab Fab with cyclic F3Q variant of the meditope
分子名称: Cetuximab Fab heavy chain, Cetuximab Fab light chain, Meditope, ...
著者Bzymek, K.P, Williams, J.C.
登録日2016-02-08
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.551 Å)
主引用文献Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Acta Crystallogr F Struct Biol Commun, 72, 2016
7KE0
DownloadVisualize
BU of 7ke0 by Molmil
HIV-1 Integrase catalytic core domain complexed with allosteric inhibitor STP03-0404
分子名称: (2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid, Integrase
著者Lindenberger, J.J, Kvaratskhelia, M.
登録日2020-10-09
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献A highly potent and safe pyrrolopyridine-based allosteric HIV-1 integrase inhibitor targeting host LEDGF/p75-integrase interaction site.
Plos Pathog., 17, 2021
7K42
DownloadVisualize
BU of 7k42 by Molmil
Crystal structure of the second bromodomain (BD2) of human TAF1 bound to dioxane
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, SULFATE ION, ...
著者Karim, M.R, Schonbrunn, E.
登録日2020-09-14
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery of Dual TAF1-ATR Inhibitors and Ligand-Induced Structural Changes of the TAF1 Tandem Bromodomain.
J.Med.Chem., 65, 2022
7JTJ
DownloadVisualize
BU of 7jtj by Molmil
Crystal structure of the second heterocyclization domain of yersiniabactin synthetase
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Irp2 protein, SODIUM ION
著者Xia, Y, Gnann, A.D, Dowling, D.P.
登録日2020-08-17
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献High-resolution structures of a siderophore-producing cyclization domain from Yersinia pestis offer a refined proposal of substrate binding.
J.Biol.Chem., 298, 2022
7T9W
DownloadVisualize
BU of 7t9w by Molmil
Crystal structure of the Nsp3 bSM (Betacoronavirus-Specific Marker) domain from SARS-CoV-2
分子名称: CHLORIDE ION, GLYCEROL, Papain-like protease nsp3
著者Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-20
公開日2021-12-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the Nsp3 bSM (Betacoronavirus-Specific Marker) domain from SARS-CoV-2
To Be Published
7KD5
DownloadVisualize
BU of 7kd5 by Molmil
Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P212121
分子名称: 1,2-ETHANEDIOL, Maltodextrin-binding protein and Phosphoprotein fusion protein, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), ...
著者Webby, M.N, Kingston, R.L.
登録日2020-10-08
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.
Viruses, 13, 2021
5IEN
DownloadVisualize
BU of 5ien by Molmil
Structure of CDL2.2, a computationally designed Vitamin-D3 binder
分子名称: 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, CDL2.2, GLYCEROL
著者Stoddard, B.L, Doyle, L.A.
登録日2016-02-25
公開日2017-03-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.089 Å)
主引用文献Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold.
Protein Eng.Des.Sel., 31, 2018
7KCU
DownloadVisualize
BU of 7kcu by Molmil
Joint neutron/X-ray structure of Oxyferrous Dehaloperoxidase B
分子名称: Dehaloperoxidase B, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Carey, L.M, Ghiladi, R.A, Meilleur, F, Myles, D.
登録日2020-10-07
公開日2021-10-13
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (2.2 Å), X-RAY DIFFRACTION
主引用文献Complementarity of neutron, XFEL and synchrotron crystallography for defining the structures of metalloenzymes at room temperature.
Iucrj, 9, 2022
7TE0
DownloadVisualize
BU of 7te0 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor PF-07321332
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
著者Yang, K.S, Liu, W.R.
登録日2022-01-03
公開日2022-01-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evolutionary and Structural Insights about Potential SARS-CoV-2 Evasion of Nirmatrelvir.
J.Med.Chem., 65, 2022
7T2I
DownloadVisualize
BU of 7t2i by Molmil
Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 bound to ZS1-588
分子名称: 1,2-ETHANEDIOL, 4-(6-{1-[(R)-S-methanesulfonimidoyl]cyclopropyl}-2-[(3R)-3-methylmorpholin-4-yl]pyrimidin-4-yl)-1H-pyrrolo[2,3-b]pyridine, DIMETHYL SULFOXIDE, ...
著者Karim, M.R, Schonbrunn, E.
登録日2021-12-04
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 bound to ZS1-588
To Be Published
7ECT
DownloadVisualize
BU of 7ect by Molmil
Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Tartrate and NADPH
分子名称: GLYCEROL, Glutamate dehydrogenase, L(+)-TARTARIC ACID, ...
著者Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P.
登録日2021-03-13
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites.
Proteins, 90, 2022
7ECR
DownloadVisualize
BU of 7ecr by Molmil
Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Succinate and ADP-ribose
分子名称: GLYCEROL, Glutamate dehydrogenase, SUCCINIC ACID, ...
著者Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P.
登録日2021-03-13
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites.
Proteins, 90, 2022
5Y1H
DownloadVisualize
BU of 5y1h by Molmil
Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-2-(3-(2,4-difluorobenzyl)ureido)-N-hydroxy-4-methylpentanamide
分子名称: (2R)-2-[[2,4-bis(fluoranyl)phenyl]methylcarbamoylamino]-4-methyl-N-oxidanyl-pentanamide, GLYCEROL, M1 family aminopeptidase, ...
著者Marapaka, A.K, Zhang, Y, Addlagatta, A.
登録日2017-07-20
公開日2018-08-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-2-(3-(2,4-difluorobenzyl)ureido)-N-hydroxy-4-methylpentanamide
To Be Published
5Y1R
DownloadVisualize
BU of 5y1r by Molmil
Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-N-hydroxy-4-methyl-2-(3-( o-tolyl)ureido)pentanamide
分子名称: (2R)-4-methyl-2-[(2-methylphenyl)carbamoylamino]-N-oxidanyl-pentanamide, GLYCEROL, M1 family aminopeptidase, ...
著者Marapaka, A.K, Zhang, Y, Addlagatta, A.
登録日2017-07-21
公開日2018-08-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-N-hydroxy-4-methyl-2-(3-( o-tolyl)ureido)pentanamide
To Be Published
5IAO
DownloadVisualize
BU of 5iao by Molmil
Structure and mapping of spontaneous mutational sites of PyrR from Mycobacterium tuberculosis
分子名称: 5-FLUOROURACIL, Bifunctional protein PyrR
著者Sivaraman, J, Ghode, P, Ramachandran, S.
登録日2016-02-21
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Structure and mapping of spontaneous mutational sites of PyrR from Mycobacterium tuberculosis
Biochem.Biophys.Res.Commun., 471, 2016
5I8Z
DownloadVisualize
BU of 5i8z by Molmil
Crystal structure of B. pseudomallei FabI in complex with NAD and PT12
分子名称: 5-HEXYL-2-(4-NITROPHENOXY)PHENOL, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Hirschbeck, M.W, Eltschkner, S, Tonge, P.J, Kisker, C.
登録日2016-02-19
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.623 Å)
主引用文献Rationalizing the Binding Kinetics for the Inhibition of the Burkholderia pseudomallei FabI1 Enoyl-ACP Reductase.
Biochemistry, 56, 2017
1WTW
DownloadVisualize
BU of 1wtw by Molmil
Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GCGATCGC
分子名称: 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
著者Chen, C.-Y, Ko, T.-P, Lin, T.-W, Chou, C.-C, Chen, C.-J, Wang, A.H.-J.
登録日2004-11-29
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
5YHP
DownloadVisualize
BU of 5yhp by Molmil
Proline iminopeptidase from Psychrophilic yeast glaciozyma antarctica
分子名称: CITRATE ANION, Cold active proline iminopeptidase
著者Rodzli, N.A, Kamaruddin, S, Jonet, A, Seman, W.M.K.W, Tab, M.M, Minor, N, Jaafar, N.R, Mahadi, N.M, Murad, A.M.A, Bakar, F.D.A, Illias, R.M.D.
登録日2017-09-29
公開日2017-10-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Proline iminopeptidase from Psychrophilic yeast glaciozyma antarctica
To Be Published
7KOT
DownloadVisualize
BU of 7kot by Molmil
Energetic and structural effects of the Tanford transition on the ligand recognition of bovine Beta-lactoglobulin
分子名称: Beta-lactoglobulin, DODECYL SULFATE
著者Rodriguez-Hernandez, A, Rodriguez-Romero, A.
登録日2020-11-09
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Energetic and structural effects of the Tanford transition on ligand recognition of bovine beta-lactoglobulin.
Arch.Biochem.Biophys., 699, 2021

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon