PDB: 2013 件ウェブページステータス検索Chemie searchBIRD

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7UI9	Core Mediator-PICearly (Copy A) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K. 登録日 2022-03-28 公開日 2023-02-15 最終更新日 2023-03-08 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of a transcription pre-initiation complex on a divergent promoter. Mol.Cell, 83, 2023
5OT2	RNA polymerase II elongation complex in the presence of 3d-Napht-A 分子名称: 2-ethyl-7-methoxy-naphthalene, DNA non-template strand, DNA template strand, ... 著者 Malvezzi, S, Farnung, L, Aloisi, C, Angelov, T, Cramer, P, Sturla, S.J. 登録日 2017-08-19 公開日 2017-11-01 最終更新日 2019-07-10 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Mechanism of RNA polymerase II stalling by DNA alkylation. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1PQV	RNA polymerase II-TFIIS complex 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2003-06-19 公開日 2003-08-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Architecture of the RNA Polymerase II-TFIIS Complex and Implications for mRNA Cleavage Cell(Cambridge,Mass.), 114, 2003
5X50	RNA Polymerase II from Komagataella Pastoris (Type-2 crystal) 分子名称: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit, ... 著者 Ehara, H, Umehara, T, Sekine, S, Yokoyama, S. 登録日 2017-02-14 公開日 2017-05-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.293 Å) 主引用文献 Crystal structure of RNA polymerase II from Komagataella pastoris Biochem. Biophys. Res. Commun., 487, 2017
5M64	RNA Polymerase I elongation complex with A49 tandem winged helix domain 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Tafur, L, Sadian, Y, Hoffmann, N.A, Jakobi, A.J, Wetzel, R, Hagen, W.J.H, Sachse, C, Muller, C.W. 登録日 2016-10-24 公開日 2016-12-21 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular Structures of Transcribing RNA Polymerase I. Mol. Cell, 64, 2016
5M5W	RNA Polymerase I open complex 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Tafur, L, Sadian, Y, Hoffmann, N.A, Jakobi, A.J, Wetzel, R, Hagen, W.J.H, Sachse, C, Muller, C.W. 登録日 2016-10-23 公開日 2016-12-07 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Molecular Structures of Transcribing RNA Polymerase I. Mol. Cell, 64, 2016
5M5Y	RNA Polymerase I elongation complex 2 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Tafur, L, Sadian, Y, Hoffmann, N.A, Jakobi, A.J, Wetzel, R, Hagen, W.J.H, Sachse, C, Muller, C.W. 登録日 2016-10-23 公開日 2016-12-21 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Molecular Structures of Transcribing RNA Polymerase I. Mol. Cell, 64, 2016
5M5X	RNA Polymerase I elongation complex 1 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Tafur, L, Sadian, Y, Hoffmann, N.A, Jakobi, A.J, Wetzel, R, Hagen, W.J.H, Sachse, C, Muller, C.W. 登録日 2016-10-23 公開日 2016-12-21 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Molecular Structures of Transcribing RNA Polymerase I. Mol. Cell, 64, 2016
5N61	RNA polymerase I initially transcribing complex 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P. 登録日 2017-02-14 公開日 2017-04-05 最終更新日 2019-10-02 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural Basis of RNA Polymerase I Transcription Initiation. Cell, 169, 2017
5M3F	Yeast RNA polymerase I elongation complex at 3.8A 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S. 登録日 2016-10-14 公開日 2016-11-23 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of RNA polymerase I transcribing ribosomal DNA genes. Nature, 540, 2016
5M3M	Free monomeric RNA polymerase I at 4.0A resolution 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S. 登録日 2016-10-15 公開日 2016-11-23 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structure of RNA polymerase I transcribing ribosomal DNA genes. Nature, 540, 2016
5N5Y	Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III) 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P. 登録日 2017-02-14 公開日 2017-04-05 最終更新日 2018-10-03 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Structural Basis of RNA Polymerase I Transcription Initiation. Cell, 169, 2017
5N5Z	Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II) 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P. 登録日 2017-02-14 公開日 2017-04-05 最終更新日 2018-10-03 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Structural Basis of RNA Polymerase I Transcription Initiation. Cell, 169, 2017
5N60	Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I) 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P. 登録日 2017-02-14 公開日 2017-04-05 最終更新日 2018-10-03 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Structural Basis of RNA Polymerase I Transcription Initiation. Cell, 169, 2017
6TPS	early intermediate RNA Polymerase I Pre-initiation complex - eiPIC 分子名称: DNA foreign, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, ... 著者 Pilsl, M, Engel, C. 登録日 2019-12-14 公開日 2020-03-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Structural basis of RNA polymerase I pre-initiation complex formation and promoter melting. Nat Commun, 11, 2020
8CXI	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: A11 heavy chain, A11 light chain, Ankyrin repeat family A protein 2,Envelope E protein, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
5FJ8	Cryo-EM structure of yeast RNA polymerase III elongation complex at 3. 9 A 分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ... 著者 Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W. 登録日 2015-10-06 公開日 2015-11-25 最終更新日 2017-08-30 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Molecular Structures of Unbound and Transcribing RNA Polymerase III. Nature, 528, 2015
5XON	RNA Polymerase II elongation complex bound with Spt4/5 and TFIIS 分子名称: DNA (48-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Yokoyama, T, Shigematsu, H, Shirouzu, M, Sekine, S. 登録日 2017-05-29 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
5XOG	RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (30-MER), DNA (39-MER), ... 著者 Ehara, H, Shirouzu, M, Sekine, S. 登録日 2017-05-28 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
1NT9	Complete 12-subunit RNA polymerase II 分子名称: DNA-DIRECTED RNA POLYMERASE II 13.6 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT, ... 著者 Armache, K.-J, Kettenberger, H, Cramer, P. 登録日 2003-01-29 公開日 2003-04-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Architecture of initiation-competent 12-subunit RNA polymerase II Proc.Natl.Acad.Sci.USA, 100, 2003
8P4B	Structural insights into human co-transcriptional capping - structure 2 分子名称: DNA (35-MER), DNA (5'-D(P*AP*GP*CP*GP*GP*CP*GP*GP*AP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*AP*GP*CP*TP*G)-3'), DNA-directed RNA polymerase II subunit E, ... 著者 Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P. 登録日 2023-05-20 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into human co-transcriptional capping. Mol.Cell, 83, 2023
5FJ9	Cryo-EM structure of yeast apo RNA polymerase III at 4.6 A 分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ... 著者 Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W. 登録日 2015-10-06 公開日 2015-11-25 最終更新日 2019-10-30 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular Structures of Unbound and Transcribing RNA Polymerase III. Nature, 528, 2015
5FJA	Cryo-EM structure of yeast RNA polymerase III at 4.7 A 分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ... 著者 Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W. 登録日 2015-10-06 公開日 2015-11-25 最終更新日 2017-08-02 実験手法 ELECTRON MICROSCOPY (4.65 Å) 主引用文献 Molecular Structures of Unbound and Transcribing RNA Polymerase III. Nature, 528, 2015
7XN7	RNA polymerase II elongation complex containing Spt4/5, Elf1, Spt6, Spn1 and Paf1C 分子名称: Chromatin elongation factor SPT5, Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-04-28 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
6GYM	Structure of a yeast closed complex with distorted DNA (CCdist) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019

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