PDB: 243531 件ウェブページステータス検索Chemie searchBIRD

---

9DE5	Structure of full-length HIV TAR RNA bound to HIV Tat RNA-binding domain 分子名称: POTASSIUM ION, Protein Tat, RNA (55-MER) 著者 Bou-Nader, C, Zhang, J. 登録日 2024-08-28 公開日 2025-03-12 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structures of complete HIV-1 TAR RNA portray a dynamic platform poised for protein binding and structural remodeling. Nat Commun, 16, 2025
8EKZ	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGGAGAAGTAGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*GP*AP*GP*AP*AP*GP*TP*AP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*TP*AP*CP*TP*TP*CP*TP*CP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-22 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EMD	Human PU.1 ETS-Domain (165-270) Q226E Mutant Bound to d(AATAAGCGGAAGTGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-27 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8E5Y	Human PU.1 ETS-Domain Bound to d(AATAAGCGGAAGTGGG) Acetate Free at pH 5.4 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-08-22 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EE9	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGGAATGGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*AP*AP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*TP*TP*TP*TP*AP*T)-3'), Transcription factor PU.1 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-06 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EK8	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGGAGAAGGG) 分子名称: DNA (5'-D(*AP*TP*AP*AP*AP*AP*GP*GP*AP*GP*AP*AP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*TP*TP*CP*TP*CP*CP*TP*TP*TP*TP*AP*T)-3'), Transcription factor PU.1 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-20 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EBH	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAATGGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3'), Transcription factor PU.1 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-08-31 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
8EJ6	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGAGGAATGGGG) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*AP*GP*GP*AP*AP*TP*GP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*CP*AP*TP*TP*CP*CP*TP*CP*TP*TP*AP*T)-3'), Transcription factor PU.1 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-09-16 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
5ZJN	Structure of N-acetylmannosamine-6-phosphate-2-epimerase from Vibrio cholerae with N-acetylmannosamine-6-phosphate 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, N-acetylmannosamine-6-phosphate, ... 著者 Manjunath, L, Guntupalli, S. 登録日 2018-03-21 公開日 2018-09-19 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 Crystal structures and kinetic analyses of N-acetylmannosamine-6-phosphate 2-epimerases from Fusobacterium nucleatum and Vibrio cholerae Acta Crystallogr F Struct Biol Commun, 74, 2018
5HY1	high resolution structure of barbiturase 分子名称: 1,3,5-triazine-2,4,6-triol, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Scott, C, Balotra, S, Wilding, M, Newman, J. 登録日 2016-02-01 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
8IY6	ETB-Gi complex bound to Endotheline-1, focused on receptor 分子名称: Endothelin type B receptor, Endothelin-1 著者 Sano, F.K, Akasaka, H, Shihoya, W, Nureki, O. 登録日 2023-04-04 公開日 2023-08-16 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (3.13 Å) 主引用文献 Cryo-EM structure of the endothelin-1-ET B -G i complex. Elife, 12, 2023
5N7D	MAGI-1 complexed with a RSK1 peptide 分子名称: CALCIUM ION, GLYCEROL, Membrane-associated guanylate kinase, ... 著者 Gogl, G, Nyitray, L. 登録日 2017-02-20 公開日 2017-11-08 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Dynamic control of RSK complexes by phosphoswitch-based regulation. FEBS J., 285, 2018
7VKW	The apo structure of beta-1,2-glucosyltransferase from Ignavibacterium album 分子名称: beta-1,2-glucosyltransferase 著者 Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H. 登録日 2021-10-01 公開日 2022-03-09 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages. J.Biol.Chem., 298, 2022
8VKM	Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (conformation 1) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ... 著者 Zhu, X, Mannar, D, Saville, J, Poloni, C, Bezeruk, A, Tidey, K, Ahmed, S, Tuttle, K, Vahdatihassani, F, Cholak, S, Cook, L, Steiner, T.S, Subramaniam, S. 登録日 2024-01-09 公開日 2024-02-14 最終更新日 2025-02-26 実験手法 ELECTRON MICROSCOPY (2.83 Å) 主引用文献 Altered receptor binding, antibody evasion and retention of T cell recognition by the SARS-CoV-2 XBB.1.5 spike protein. Nat Commun, 15, 2024
8VKL	Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (conformation 2) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ... 著者 Zhu, X, Mannar, D, Saville, J, Poloni, C, Bezeruk, A, Tidey, K, Ahmed, S, Tuttle, K, Vahdatihassani, F, Cholak, S, Cook, L, Steiner, T.S, Subramaniam, S. 登録日 2024-01-09 公開日 2024-02-14 最終更新日 2025-02-26 実験手法 ELECTRON MICROSCOPY (2.91 Å) 主引用文献 Altered receptor binding, antibody evasion and retention of T cell recognition by the SARS-CoV-2 XBB.1.5 spike protein. Nat Commun, 15, 2024
9R3I	Structure of liver pyruvate kinase in complex with fluorescent probe 4c 分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 4-[4-[[7-(dimethylamino)-2,1,3-benzoxadiazol-4-yl]sulfonyl]piperazin-1-yl]sulfonyl-5-pyridin-3-yl-benzene-1,2-diol, Isoform L-type of Pyruvate kinase PKLR 著者 Bogucka, A, Nilsson, O, Grotli, M, Hyvonen, M. 登録日 2025-05-05 公開日 2025-08-13 実験手法 X-RAY DIFFRACTION (2.579 Å) 主引用文献 Fluorescent binding assay for allosteric ligands of liver pyruvate kinase. Eur.J.Med.Chem., 298, 2025
7W2B	The closed conformation of the sigma-1 receptor from Xenopus laevis 分子名称: GOLD ION, Sigma non-opioid intracellular receptor 1, octyl beta-D-glucopyranoside 著者 Meng, F, Sun, Z, Zhou, X. 登録日 2021-11-23 公開日 2022-03-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.203 Å) 主引用文献 An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway. Nat Commun, 13, 2022
8VKN	Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (focused refinement of RBD and mouse ACE2) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ... 著者 Zhu, X, Mannar, D, Saville, J, Poloni, C, Bezeruk, A, Tidey, K, Ahmed, S, Tuttle, K, Vahdatihassani, F, Cholak, S, Cook, L, Steiner, T.S, Subramaniam, S. 登録日 2024-01-09 公開日 2024-02-14 最終更新日 2025-02-26 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Altered receptor binding, antibody evasion and retention of T cell recognition by the SARS-CoV-2 XBB.1.5 spike protein. Nat Commun, 15, 2024
9QAN	Human angiotensin-1 converting enzyme C-domain in complex with ramiprilat 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ... 著者 Gregory, K.S, Acharya, K.R. 登録日 2025-02-28 公開日 2025-09-03 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Molecular basis of domain-specific angiotensin I-converting enzyme inhibition by the antihypertensive drugs enalaprilat, ramiprilat, trandolaprilat, quinaprilat and perindoprilat. Febs J., 2025
9BZP	Homomeric alpha3 glycine receptor in the presence of 0.1 millimolar glycine and 1 micromolar zinc in a desensitized state 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, ... 著者 Kindig, K, Gibbs, E, Chakrapani, S. 登録日 2024-05-24 公開日 2024-11-13 最終更新日 2025-05-28 実験手法 ELECTRON MICROSCOPY (2.88 Å) 主引用文献 Mechanisms underlying modulation of human GlyR alpha 3 by Zn 2+ and pH. Sci Adv, 10, 2024
9BWJ	Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in an apo state 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor subunit alpha-3, ... 著者 Kindig, K, Gibbs, E, Chakrapani, S. 登録日 2024-05-21 公開日 2024-11-13 最終更新日 2025-05-28 実験手法 ELECTRON MICROSCOPY (2.21 Å) 主引用文献 Mechanisms underlying modulation of human GlyR alpha 3 by Zn 2+ and pH. Sci Adv, 10, 2024
8ORP	Crystal structure of Drosophila melanogaster alpha-amylase in complex with the inhibitor acarbose 分子名称: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... 著者 Aghajari, N, Haser, R. 登録日 2023-04-16 公開日 2023-08-16 最終更新日 2025-10-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Functional Characterization of Drosophila melanogaster alpha-Amylase. Molecules, 28, 2023
9C6E	High-resolution structure of bovine (3-367)Arrestin-1 in a pre-activated conformation 分子名称: GLYCEROL, GLYCOLIC ACID, S-arrestin, ... 著者 Salom, D, Palczewski, K, Kiser, P.D. 登録日 2024-06-07 公開日 2024-11-06 最終更新日 2025-01-29 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Insights into the Activation and Self-Association of Arrestin-1. Biochemistry, 64, 2025
9BWG	Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in a desensitized state 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, ... 著者 Kindig, K, Gibbs, E, Chakrapani, S. 登録日 2024-05-21 公開日 2024-11-13 最終更新日 2025-05-28 実験手法 ELECTRON MICROSCOPY (2.59 Å) 主引用文献 Mechanisms underlying modulation of human GlyR alpha 3 by Zn 2+ and pH. Sci Adv, 10, 2024
8QYX	Human 60S ribosomal subunit 分子名称: 1,4-DIAMINOBUTANE, 28S rRNA, 5.8S rRNA, ... 著者 Wiechert, F, Schacherl, M, Sprink, T. 登録日 2023-10-26 公開日 2024-12-11 最終更新日 2025-01-22 実験手法 ELECTRON MICROSCOPY (1.78 Å) 主引用文献 Visualizing the modification landscape of the human 60S ribosomal subunit at close to atomic resolution. Nucleic Acids Res., 53, 2025

<439440441442443444445446447448449450451452453454>