Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WW9
DownloadVisualize
BU of 5ww9 by Molmil
Crystal structure of R73E mutant of the second DNA-Binding protein under starvation from Mycobacterium smegmatis
分子名称: CHLORIDE ION, FE (III) ION, MAGNESIUM ION, ...
著者Williams, S.M, Chatterji, D.
登録日2016-12-31
公開日2017-08-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
5WW8
DownloadVisualize
BU of 5ww8 by Molmil
Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 480 iron atoms per dodecamer
分子名称: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
著者Williams, S.M, Chatterji, D.
登録日2016-12-31
公開日2017-08-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
5WW7
DownloadVisualize
BU of 5ww7 by Molmil
Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 360 iron atoms per dodecamer
分子名称: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
著者Williams, S.M, Chatterji, D.
登録日2016-12-31
公開日2017-08-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
5WW5
DownloadVisualize
BU of 5ww5 by Molmil
Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 100 iron atoms per dodecamer
分子名称: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
著者Williams, S.M, Chatterji, D.
登録日2016-12-31
公開日2017-08-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
5WW6
DownloadVisualize
BU of 5ww6 by Molmil
Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 240 iron atoms per dodecamer
分子名称: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
著者Williams, S.M, Chatterji, D.
登録日2016-12-31
公開日2017-08-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
2XET
DownloadVisualize
BU of 2xet by Molmil
Conserved hydrophobic clusters on the surface of the Caf1A usher C-terminal domain are important for F1 antigen assembly
分子名称: F1 CAPSULE-ANCHORING PROTEIN, SULFATE ION
著者Dubnovitsky, A.P, Duck, Z, Kersley, J.E, Hard, T, MacIntyre, S, Knight, S.D.
登録日2010-05-17
公開日2010-09-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Conserved Hydrophobic Clusters on the Surface of the Caf1A Usher C-Terminal Domain are Important for F1 Antigen Assembly.
J.Mol.Biol., 403, 2010
3FCG
DownloadVisualize
BU of 3fcg by Molmil
Crystal Structure Analysis of the Middle Domain of the Caf1A Usher
分子名称: CHLORIDE ION, F1 capsule-anchoring protein
著者Yu, X, Visweswaran, G.R, Duck, Z, Marupakula, S, MacIntyre, S, Knight, S, Zavialov, A.V.
登録日2008-11-21
公開日2008-12-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Caf1A usher possesses a Caf1 subunit-like domain that is crucial for Caf1 fibre secretion
Biochem.J., 418, 2009
3F64
DownloadVisualize
BU of 3f64 by Molmil
F17a-G lectin domain with bound GlcNAc(beta1-O)paranitrophenyl ligand
分子名称: 4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, F17a-G
著者Buts, L, De Boer, A, Olsson, J.D.M, Jonckheere, W, De Kerpel, M, De Genst, E, Guerardel, Y, Willaert, R, Wyns, L, Wuhrer, M, Oscarson, S, De Greve, H, Bouckaert, J.
登録日2008-11-05
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli.
Biology (Basel), 2, 2013
3FFO
DownloadVisualize
BU of 3ffo by Molmil
F17b-G lectin domain with bound GlcNAc(beta1-2)man
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose, Adhesin, ...
著者Buts, L, De Boer, A, Olsson, J.D.M, Jonckheere, W, De Kerpel, M, De Genst, E, Guerardel, Y, Willaert, R, Wyns, L, Wuhrer, M, Oscarson, S, De Greve, H, Bouckaert, J.
登録日2008-12-04
公開日2009-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli.
Biology (Basel), 2, 2013
3F6J
DownloadVisualize
BU of 3f6j by Molmil
F17a-G lectin domain with bound GlcNAc(beta1-3)Gal
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-methyl beta-D-galactopyranoside, F17a-G
著者Buts, L, de Boer, A, Olsson, J.D.M, Jonckheere, W, De Kerpel, M, De Genst, E, Guerardel, Y, Willaert, R, Wyns, L, Wuhrer, M, Oscarson, S, De Greve, H, Bouckaert, J.
登録日2008-11-06
公開日2009-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli
Biology, 2, 2013
4AUJ
DownloadVisualize
BU of 4auj by Molmil
FimH lectin domain co-crystal with a alpha-D-mannoside O-linked to para hydroxypropargyl phenyl
分子名称: 4-(3-hydroxyprop-1-yn-1-yl)phenyl alpha-D-mannopyranoside, FIMH
著者Bouckaert, J, Touaibia, M, Roos, G, Shiao, T.C, Wang, Q, Papadopoulos, A, Roy, R.
登録日2012-05-17
公開日2013-05-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.527 Å)
主引用文献Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of Fimh.
Acs Med.Chem.Lett., 4, 2013
4ATT
DownloadVisualize
BU of 4att by Molmil
FimH lectin domain co-crystal with a alpha-D-mannoside O-linked to a propynyl para methoxy phenyl
分子名称: 3-(4-methoxyphenyl)prop-2-yn-1-yl alpha-D-mannopyranoside, FIMH
著者Bouckaert, J, Touaibia, M, Roos, G, Shiao, T.C, Wang, Q, Papadopoulos, A, Roy, R.
登録日2012-05-09
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.251 Å)
主引用文献Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of Fimh.
Acs Med.Chem.Lett., 4, 2013
4BUQ
DownloadVisualize
BU of 4buq by Molmil
Crystal structure of wild type FimH lectin domain in complex with heptyl alpha-D-mannopyrannoside
分子名称: FIMH, heptyl alpha-D-mannopyranoside
著者Rabbani, S, Bouckaert, J, Zalewski, A, Preston, R, Eid, S, Thompson, A, Puorger, C, Glockshuber, R, Ernst, B.
登録日2013-06-23
公開日2014-02-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of Fimh
Acs Med.Chem.Lett., 4, 2013
7LYU
DownloadVisualize
BU of 7lyu by Molmil
Reelin repeat 8
分子名称: CALCIUM ION, Reelin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Turk, L.S, Comoletti, D.
登録日2021-03-08
公開日2022-06-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of Reelin repeat 8 and the adjacent C-terminal region.
Biophys.J., 121, 2022
8HIT
DownloadVisualize
BU of 8hit by Molmil
Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4
分子名称: Cytotoxic T-lymphocyte protein 4, JS007-VH, JS007-VL
著者Tan, S, Shi, Y, Wang, Q, Gao, G.F, Guan, J, Chai, Y, Qi, J.
登録日2022-11-21
公開日2023-02-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Characterization of the high-affinity anti-CTLA-4 monoclonal antibody JS007 for immune checkpoint therapy of cancer.
Mabs, 15, 2023
1W97
DownloadVisualize
BU of 1w97 by Molmil
cyto-EpsL: the cytoplasmic domain of EpsL, an inner membrane component of the type II secretion system of Vibrio cholerae
分子名称: TYPE II SECRETION SYSTEM PROTEIN L
著者Abendroth, J, Bagdasarian, M, Sansdkvist, M, Hol, W.G.J.
登録日2004-10-06
公開日2004-11-30
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Structure of the Cytoplasmic Domain of Epsl, an Inner Membrane Component of the Type II Secretion System of Vibrio Cholerae: An Unusual Member of the Actin-Like ATPase Superfamily
J.Mol.Biol., 344, 2004
7DV4
DownloadVisualize
BU of 7dv4 by Molmil
Crystal structure of anti-CTLA-4 VH domain in complex with human CTLA-4
分子名称: 1,2-ETHANEDIOL, 4003-1(VH), Cytotoxic T-lymphocyte protein 4
著者Li, H, Gan, X, He, Y.
登録日2021-01-12
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献An anti-CTLA-4 heavy chain-only antibody with enhanced T reg depletion shows excellent preclinical efficacy and safety profile.
Proc.Natl.Acad.Sci.USA, 119, 2022
8G8N
DownloadVisualize
BU of 8g8n by Molmil
CTLA4 Fab with peptide
分子名称: CYS-PRO-GLY-LYS-GLY-LEU-PRO-SER-CYS, Fab heavy chain, Fab light chain
著者Williams, J.C.
登録日2023-02-18
公開日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献XTX101, a tumor-activated, Fc-enhanced anti-CTLA-4 monoclonal antibody, demonstrates tumor-growth inhibition and tumor-selective pharmacodynamics in mouse models of cancer.
J Immunother Cancer, 11, 2023
8G2M
DownloadVisualize
BU of 8g2m by Molmil
The tumor activated anti-CTLA-4 monoclonal antibody XTX101 demonstrates tumor-growth inhibition and tumor-selective pharmacodynamics in mouse models of cancer
分子名称: CITRIC ACID, Heavy chain of humanized IgG, Light chain of humanized IgG, ...
著者Williams, J.C, Williams, J.C.
登録日2023-02-05
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献XTX101, a tumor-activated, Fc-enhanced anti-CTLA-4 monoclonal antibody, demonstrates tumor-growth inhibition and tumor-selective pharmacodynamics in mouse models of cancer.
J Immunother Cancer, 11, 2023
8P4T
DownloadVisualize
BU of 8p4t by Molmil
The spike complex of the Lujo Virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, ...
著者Eilon-Ashkenazy, M, Diskin, R.
登録日2023-05-23
公開日2024-06-12
最終更新日2024-09-04
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献The structure of the Lujo virus spike complex.
Nat Commun, 15, 2024
3S0X
DownloadVisualize
BU of 3s0x by Molmil
The crystal structure of GxGD membrane protease FlaK
分子名称: Peptidase A24B, FlaK domain protein
著者Hu, J, Xue, Y, Ha, Y.
登録日2011-05-13
公開日2011-08-03
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The crystal structure of GXGD membrane protease FlaK.
Nature, 475, 2011
6ZYA
DownloadVisualize
BU of 6zya by Molmil
Extended human uromodulin filament core at 3.5 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Uromodulin, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Stanisich, J.J, Zyla, D, Afanasyev, P, Xu, J, Pilhofer, M, Boeringer, D, Glockshuber, R.
登録日2020-07-31
公開日2020-09-02
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The cryo-EM structure of the human uromodulin filament core reveals a unique assembly mechanism.
Elife, 9, 2020
1M1B
DownloadVisualize
BU of 1m1b by Molmil
Crystal Structure of Phosphoenolpyruvate Mutase Complexed with Sulfopyruvate
分子名称: MAGNESIUM ION, PHOSPHOENOLPYRUVATE PHOSPHOMUTASE, SULFOPYRUVATE
著者Liu, S, Lu, Z, Jia, Y, Dunaway-Mariano, D, Herzberg, O.
登録日2002-06-18
公開日2002-08-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Dissociative phosphoryl transfer in PEP mutase catalysis: structure of the enzyme/sulfopyruvate complex and kinetic properties of mutants.
Biochemistry, 41, 2002
6GUS
DownloadVisualize
BU of 6gus by Molmil
CRYSTAL STRUCTURE OF PROTEIN E FROM NON-TYPEABLE HAEMOPHILUS INFLUENZAE
分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
著者Somers, D.
登録日2018-06-19
公開日2019-05-29
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Design and Characterization of Protein E-PilA, a Candidate Fusion Antigen for Nontypeable Haemophilus influenzae Vaccine.
Infect.Immun., 87, 2019
3N7Y
DownloadVisualize
BU of 3n7y by Molmil
Crystal Structure of the Grb2 SH2 Domain in Complex with a 20-Membered Macrocyclic Ligand Having the Sequence pYVNV
分子名称: 20-membered peptide-like macrocyclic ligand, Growth factor receptor-bound protein 2
著者Whiddon, B.B, Clements, J.H, Martin, S.F.
登録日2010-05-27
公開日2011-01-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Thermodynamic and Structural Effects of Macrocyclization as a Constraining Method in Protein-Ligand Interactions.
ACS MED.CHEM.LETT., 1, 2010

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon