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3EOZ
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BU of 3eoz by Molmil
Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w
分子名称: GLYCEROL, PHOSPHATE ION, putative Phosphoglycerate mutase
著者Wernimont, A.K, Tempel, W, Lam, A, Zhao, Y, Lew, J, Lin, Y.H, Wasney, G, Vedadi, M, Kozieradzki, I, Cossar, D, Schapira, M, Weigelt, J, Arrowsmith, C.H, Bochkarev, A, Edwards, A.M, Hui, R, Pizarro, J, Hills, T, Structural Genomics Consortium (SGC)
登録日2008-09-29
公開日2008-11-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Characterization of a new phosphatase from Plasmodium.
Mol.Biochem.Parasitol., 179, 2011
6Y09
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BU of 6y09 by Molmil
Crystal structure of Atg16L in complex with GTP-bound Rab33B (Q92L)
分子名称: 1,2-ETHANEDIOL, Autophagy-related protein 16-1, DI(HYDROXYETHYL)ETHER, ...
著者Pantoom, S, Wu, Y.W.
登録日2020-02-07
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献RAB33B recruits the ATG16L1 complex to the phagophore via a noncanonical RAB binding protein.
Autophagy, 17, 2021
4WFD
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BU of 4wfd by Molmil
Structure of the Rrp6-Rrp47-Mtr4 interaction
分子名称: ATP-dependent RNA helicase DOB1, Exosome complex exonuclease RRP6, Exosome complex protein LRP1, ...
著者Schuch, B, Conti, E.
登録日2014-09-14
公開日2014-10-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase.
Embo J., 33, 2014
6SH9
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BU of 6sh9 by Molmil
EngBF DARPin Fusion 4b D12
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Endo-alpha-N-acetylgalactosaminidase,DARPin 4b D12, ...
著者Ernst, P, Pluckthun, A, Mittl, P.R.E.
登録日2019-08-06
公開日2019-11-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural analysis of biological targets by host:guest crystal lattice engineering.
Sci Rep, 9, 2019
1EMF
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BU of 1emf by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
分子名称: GREEN FLUORESCENT PROTEIN
著者Palm, G, Zdanov, A, Wlodawer, A.
登録日1997-03-31
公開日1997-08-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structural basis for spectral variations in green fluorescent protein.
Nat.Struct.Biol., 4, 1997
1B9C
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BU of 1b9c by Molmil
Green Fluorescent Protein Mutant F99S, M153T and V163A
分子名称: PROTEIN (GREEN FLUORESCENT PROTEIN)
著者Battistutta, R, Negro, A, Zanotti, G.
登録日1999-02-09
公開日2000-11-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and refolding properties of the mutant F99S/M153T/V163A of the green fluorescent protein.
Proteins, 41, 2000
8K2C
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BU of 8k2c by Molmil
Cryo-EM structure of the human 80S ribosome with Tigecycline
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Li, X, Wang, M, Cheng, J.
登録日2023-07-12
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8BN3
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BU of 8bn3 by Molmil
Yeast 80S, ES7s delta, eIF5A, Stm1 containing
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Dimitrova-Paternoga, L, Paternoga, H, Wilson, D.N.
登録日2022-11-12
公開日2024-01-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Evolving precision: rRNA expansion segment 7S modulates translation velocity and accuracy in eukaryal ribosomes.
Nucleic Acids Res., 52, 2024
1NFQ
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BU of 1nfq by Molmil
Rv2002 gene product from Mycobacterium tuberculosis
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Androsterone, Putative oxidoreductase Rv2002
著者Yang, J.K, Park, M.S, Waldo, G.S, Suh, S.W, TB Structural Genomics Consortium (TBSGC)
登録日2002-12-15
公開日2002-12-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Directed evolution approach to a structural genomics project: Rv2002 from Mycobacterium tuberculosis
Proc.Natl.Acad.Sci.USA, 100, 2003
6ZAY
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BU of 6zay by Molmil
Crystal structure of Atg16L in complex with GDP-bound Rab33B
分子名称: 1,2-ETHANEDIOL, Autophagy-related protein 16-1, DI(HYDROXYETHYL)ETHER, ...
著者Pantoom, S, Wu, Y.W.
登録日2020-06-06
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献RAB33B recruits the ATG16L1 complex to the phagophore via a noncanonical RAB binding protein.
Autophagy, 17, 2021
6WVI
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BU of 6wvi by Molmil
VKOR-like from Takifugu rubripes
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Vitamin K epoxide reductase-like protein, termini restrained by green fluorescent protein
著者Liu, S, Sukumar, N, Li, W.
登録日2020-05-06
公開日2020-11-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation.
Science, 371, 2021
7O7Z
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BU of 7o7z by Molmil
Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
登録日2021-04-14
公開日2021-06-02
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
8XSX
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BU of 8xsx by Molmil
Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Li, X, Wang, M, Cheng, J.
登録日2024-01-10
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
6GQH
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BU of 6gqh by Molmil
Structure of GFPmut2 crystallized at pH 8.5 and transferred to pH 6
分子名称: CALCIUM ION, Green fluorescent protein
著者Pasqualetto, E, Lolli, G, Battistutta, R.
登録日2018-06-07
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
2OKY
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BU of 2oky by Molmil
A non-invasive GFP-based biosensor for mercury ions
分子名称: Green fluorescent protein
著者Sagermann, M, Chapleau, R.R.
登録日2007-01-18
公開日2007-12-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design of a highly specific and noninvasive biosensor suitable for real-time in vivo imaging of mercury (II) uptake.
Protein Sci., 17, 2008
3RHC
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BU of 3rhc by Molmil
Crystal structure of the holo form of glutaredoxin C5 from Arabidopsis thaliana
分子名称: FE2/S2 (INORGANIC) CLUSTER, GLUTATHIONE, Glutaredoxin-C5, ...
著者Roret, T, Couturier, J, Tsan, P, Jacquot, J.P, Rouhier, N, Didierjean, C.
登録日2011-04-11
公開日2011-06-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Arabidopsis chloroplastic glutaredoxin c5 as a model to explore molecular determinants for iron-sulfur cluster binding into glutaredoxins.
J.Biol.Chem., 286, 2011
5JG4
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BU of 5jg4 by Molmil
Structure of the effector protein LpiR1 (Lpg0634) from Legionella pneumophila
分子名称: CITRATE ANION, GLYCEROL, PHOSPHATE ION, ...
著者Beyrakhova, K, van Straaten, K, Cygler, M.
登録日2016-04-19
公開日2016-05-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Functional Investigations of the Effector Protein LpiR1 from Legionella pneumophila.
J.Biol.Chem., 291, 2016
7ZW0
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BU of 7zw0 by Molmil
FAP-80S Complex - Rotated state
分子名称: 18S ribosomal RNA (RDN18-1), 25S ribosomal RNA (RDN25-1), 40S ribosomal protein S0-A, ...
著者Ikeuchi, K, Buschauer, R, Berninghausen, O, Becker, T, Beckmann, R.
登録日2022-05-17
公開日2022-10-05
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Sensing of individual stalled 80S ribosomes by Fap1 for nonfunctional rRNA turnover.
Mol.Cell, 82, 2022
8OVJ
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BU of 8ovj by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
分子名称: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ...
著者Rajan, K.S, Yonath, A.
登録日2023-04-26
公開日2024-05-08
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
8Q87
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BU of 8q87 by Molmil
Structure of the G. gallus 80S rotated ribosome in complex with eEF2 and SERBP1
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Nurullina, L, Jenner, L, Yusupov, M.
登録日2023-08-18
公開日2024-08-28
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells
To Be Published
8PN1
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BU of 8pn1 by Molmil
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
4IKZ
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BU of 4ikz by Molmil
Crystal structure of peptide transporter POT (E310Q mutant) in complex with alafosfalin
分子名称: Di-tripeptide ABC transporter (Permease), N-[(1R)-1-phosphonoethyl]-L-alaninamide, SULFATE ION
著者Doki, S, Kato, H.E, Ishitani, R, Nureki, O.
登録日2012-12-28
公開日2013-07-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc.Natl.Acad.Sci.USA, 110, 2013
3VHT
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BU of 3vht by Molmil
Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin
分子名称: Green fluorescent protein, Green fluorescent protein,ATPase WRNIP1, Ubiquitin, ...
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2011-09-06
公開日2012-10-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
2FL1
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BU of 2fl1 by Molmil
Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution
分子名称: Red fluorescent protein zoanRFP, SULFATE ION
著者Pletnev, V, Pletneva, N, Martynov, V, Tikhonova, T, Popov, B, Pletnev, S.
登録日2006-01-05
公開日2007-01-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a red fluorescent protein from Zoanthus, zRFP574, reveals a novel chromophore
Acta Crystallogr.,Sect.D, 62, 2006
2PXW
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BU of 2pxw by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.4 A Resolution (Transition State)
分子名称: GFP-like fluorescent chromoprotein FP506
著者Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
登録日2007-05-14
公開日2007-09-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007

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