PDB: 226262 件ウェブページステータス検索Chemie searchBIRD

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6A62	Placental protein 13/galectin-13 variant R53HH57RD33G with Lactose 分子名称: Galactoside-binding soluble lectin 13, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Su, J. 登録日 2018-06-26 公開日 2018-12-26 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Resetting the ligand binding site of placental protein 13/galectin-13 recovers its ability to bind lactose Biosci. Rep., 38, 2018
1IEL	Crystal Structure of AmpC beta-lactamase from E. coli in Complex with Ceftazidime 分子名称: ACYLATED CEFTAZIDIME, PHOSPHATE ION, beta-lactamase 著者 Powers, R.A, Caselli, E, Focia, P.J, Prati, F, Shoichet, B.K. 登録日 2001-04-10 公開日 2001-08-15 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of ceftazidime and its transition-state analogue in complex with AmpC beta-lactamase: implications for resistance mutations and inhibitor design. Biochemistry, 40, 2001
8H65	Crystal structure of human GCN5 histone acetyltransferase domain bound with butyryl-CoA 分子名称: Butyryl Coenzyme A, Histone acetyltransferase KAT2A 著者 Li, N, Tao, Y.J, Guo, Y.R. 登録日 2022-10-15 公開日 2023-05-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications. Res, 6, 2023
6JMU	Crystal structure of GIT1/Paxillin complex 分子名称: ARF GTPase-activating protein GIT1, Paxillin 著者 Zhu, J, Lin, L, Xia, Y, Zhang, R, Zhang, M. 登録日 2019-03-13 公開日 2020-05-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 GIT/PIX Condensates Are Modular and Ideal for Distinct Compartmentalized Cell Signaling. Mol.Cell, 79, 2020
8HN7	Crystal structure of monoclonal antibody complexed with SARS-CoV-2 RBD 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of monoclonal antibody 3C11, Light chain of monoclonal antibody 3C11, ... 著者 Qi, J, Chen, Y. 登録日 2022-12-07 公開日 2023-05-17 最終更新日 2023-06-07 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Characterization of RBD-specific cross-neutralizing antibodies responses against SARS-CoV-2 variants from COVID-19 convalescents. Front Immunol, 14, 2023
6JMY	Structure of wild type closed form of peptidoglycan peptidase 分子名称: CITRIC ACID, Peptidase M23, ZINC ION 著者 Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. 登録日 2019-03-13 公開日 2020-01-15 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.661 Å) 主引用文献 Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni. Nat Commun, 11, 2020
2ROK	Solution structure of the cap-binding domain of PARN complexed with the cap analog 分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, poly(A)-specific ribonuclease 著者 Nagata, T, Suzuki, S, Endo, R, Shirouzu, M, Terada, T, Inoue, M, Kigawa, T, Guntert, P, Hayashizaki, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2008-03-28 公開日 2009-02-10 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition. Nucleic Acids Res., 36, 2008
6JN2	Crystal structure of the coiled-coil domains of human DOT1L in complex with AF10 分子名称: Histone-lysine N-methyltransferase, H3 lysine-79 specific, Protein AF-10 著者 Song, X, Wang, M, Yang, N, Xu, R.M. 登録日 2019-03-13 公開日 2019-09-18 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 A higher-order configuration of the heterodimeric DOT1L-AF10 coiled-coil domains potentiates their leukemogenenic activity. Proc.Natl.Acad.Sci.USA, 116, 2019
8H6C	Crystal structure of human GCN5 histone acetyltransferase domain bound with malonyl-CoA 分子名称: Histone acetyltransferase KAT2A, MALONYL-COENZYME A 著者 Li, N, Tao, Y.J, Guo, Y.R. 登録日 2022-10-16 公開日 2023-05-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications. Res, 6, 2023
1IH8	NH3-dependent NAD+ Synthetase from Bacillus subtilis Complexed with AMP-CPP and Mg2+ ions. 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, NH(3)-DEPENDENT NAD(+) synthetase 著者 Devedjiev, Y, Symersky, J, Singh, R, Jedrzejas, M, Brouillette, C, Brouillette, W, Muccio, D, Chattopadhyay, D, DeLucas, L. 登録日 2001-04-18 公開日 2001-06-06 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis. Acta Crystallogr.,Sect.D, 57, 2001
6JN6	Metallo-Beta-Lactamase VIM-2 in complex with Dual MBL/SBL Inhibitor MS19 分子名称: Beta-lactamase class B VIM-2, FORMIC ACID, ZINC ION, ... 著者 Li, G.-B, Liu, S. 登録日 2019-03-13 公開日 2019-07-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.602 Å) 主引用文献 Structure-Based Development of (1-(3'-Mercaptopropanamido)methyl)boronic Acid Derived Broad-Spectrum, Dual-Action Inhibitors of Metallo- and Serine-beta-lactamases. J.Med.Chem., 62, 2019
8H3M	Conformation 1 of SARS-CoV-2 Omicron BA.1 Variant Spike protein complexed with MO1 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MO1 heavy chain, Spike glycoprotein 著者 Ishimaru, H, Nishimura, M, Sutandhio, S, Shigematsu, H, Kato, K, Hasegawa, N, Mori, Y. 登録日 2022-10-09 公開日 2023-05-10 最終更新日 2023-08-02 実験手法 ELECTRON MICROSCOPY (2.48 Å) 主引用文献 Identification and Analysis of Monoclonal Antibodies with Neutralizing Activity against Diverse SARS-CoV-2 Variants. J.Virol., 97, 2023
2RP3	Solution Structure of Cyanovirin-N Domain B Mutant 分子名称: Cyanovirin-N 著者 Matei, E, Furey, W, Gronenborn, A.M. 登録日 2008-04-30 公開日 2008-08-19 最終更新日 2021-11-10 実験手法 SOLUTION NMR 主引用文献 Solution and crystal structures of a sugar binding site mutant of cyanovirin-N: no evidence of domain swapping Structure, 16, 2008
8H56	Crystal structure of Rep' of porcine circovirus type 2 分子名称: Isoform Rep' of Replication-associated protein 著者 Guan, S.Y, Song, Y.F. 登録日 2022-10-12 公開日 2023-05-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Crystal structure of the dimerized of porcine circovirus type II replication-related protein Rep'. Proteins, 91, 2023
2RPN	A crucial role for high intrinsic specificity in the function of yeast SH3 domains 分子名称: Actin-binding protein, Actin-regulating kinase 1 著者 Stollar, E.J, Garcia, B, Chong, A, Forman-Kay, J, Davidson, A. 登録日 2008-06-12 公開日 2009-06-16 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p J.Biol.Chem., 284, 2009
2RI3	Crystal structure of the 3-MBT repeats from human L3MBTL1 with N358Q point mutation 分子名称: DI(HYDROXYETHYL)ETHER, Lethal(3)malignant brain tumor-like protein 著者 Li, H, Patel, D.J. 登録日 2007-10-10 公開日 2007-12-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger. Mol.Cell, 28, 2007
8H3N	Conformation 2 of SARS-CoV-2 Omicron BA.1 Variant Spike protein complexed with MO1 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MO1 heavy-chain, MO1 light chain, ... 著者 Ishimaru, H, Nishimura, M, Sutandhio, S, Shigematsu, H, Kato, K, Hasegawa, N, Mori, Y. 登録日 2022-10-09 公開日 2023-05-10 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (2.73 Å) 主引用文献 Identification and Analysis of Monoclonal Antibodies with Neutralizing Activity against Diverse SARS-CoV-2 Variants. J.Virol., 97, 2023
6JQH	Crystal structure of MaDA 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MaDA 著者 Du, X.X, Lei, X.G. 登録日 2019-03-31 公開日 2020-04-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.303 Å) 主引用文献 FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis. Nat.Chem., 12, 2020
1IN6	THERMOTOGA MARITIMA RUVB K64R MUTANT 分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ... 著者 Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A. 登録日 2001-05-12 公開日 2001-08-08 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
8GZE	Crystal Structure of human METTL9-SAH-SLC39A7 peptide complex 分子名称: Protein-L-histidine N-pros-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, Zinc transporter SLC39A7 著者 Zhao, W.T, Li, H.T. 登録日 2022-09-26 公開日 2023-05-31 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Molecular basis for protein histidine N1-specific methylation of the "His-x-His" motifs by METTL9. Cell Insight, 2, 2023
1IN7	THERMOTOGA MARITIMA RUVB R170A 分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB 著者 Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A. 登録日 2001-05-12 公開日 2001-08-08 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
6JRF	Crystal structure of ZmMoc1-Holliday junction Complex in the presence of Calcium 分子名称: CALCIUM ION, DNA (33-MER), Monokaryotic chloroplast 1, ... 著者 Lin, Z, Lin, H, Zhang, D, Yuan, C. 登録日 2019-04-03 公開日 2019-10-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.047 Å) 主引用文献 Structural basis of sequence-specific Holliday junction cleavage by MOC1. Nat.Chem.Biol., 15, 2019
8HI6	Crystal structure of the NADP+ and MSA bound N terminal domain of bi-functional malonyl-CoA reductase from Roseiflexus castenholzii 分子名称: 3-oxidanylidenepropanoic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR 著者 Zhang, X, Wu, W.P, Xu, X. 登録日 2022-11-18 公開日 2023-05-31 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of a bi-functional malonyl-CoA reductase (MCR) from the photosynthetic green non-sulfur bacterium Roseiflexus castenholzii. Mbio, 14, 2023
8H07	SARS-CoV-2 BA.4 variants S ectodomain trimer in complex with neutralizing antibody 10-5B and 6-2C 分子名称: 10-5B H chain, 10-5B L chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Wang, X, Wang, Z. 登録日 2022-09-28 公開日 2023-05-31 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Inactivated vaccine-elicited potent antibodies can broadly neutralize SARS-CoV-2 circulating variants. Nat Commun, 14, 2023
2RMY	Structure of the N-terminal BARpeptide in SDS micelles 分子名称: Myc box-dependent-interacting protein 1 著者 Loew, C, Weininger, U, Balbach, J. 登録日 2007-12-03 公開日 2008-10-14 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of helix-0 of the N-BAR domain in lipid micelles and bilayers Biophys.J., 95, 2008

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