PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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8UZL	Designed Transmembrane beta-barrel- TMB10_163 分子名称: Designed Transmembrane beta-barrel TMB10_163, HEXANE-1,6-DIOL 著者 Bera, A.K, Lemma, S.B, Kang, A, Baker, D. 登録日 2023-11-15 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Sculpting conducting nanopore size and shape through de novo protein design Science, 2024
6VDP	Crystal structure of SfmD truncated variant 分子名称: 3-methyl-L-tyrosine peroxygenase, HEME C 著者 Shin, I, Liu, A. 登録日 2019-12-27 公開日 2021-03-10 最終更新日 2021-07-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study. Chem Sci, 12, 2021
6VDZ	Crystal structure of reduced SfmD by soaking with sodium hydrosulfite 分子名称: 3-methyl-L-tyrosine peroxygenase, HEME C 著者 Shin, I, Liu, A. 登録日 2019-12-27 公開日 2021-03-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study. Chem Sci, 12, 2021
6VE0	Crystal structure of reduced SfmD by soaking with sodium hydrosulfite 分子名称: 3-methyl-L-tyrosine peroxygenase, HEME C 著者 Shin, I, Liu, A. 登録日 2019-12-27 公開日 2021-03-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study. Chem Sci, 12, 2021
6VDQ	Crystal structure of SfmD 分子名称: 3-methyl-L-tyrosine peroxygenase, HEME C 著者 Shin, I, Liu, A. 登録日 2019-12-27 公開日 2021-03-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 A novel catalytic heme cofactor in SfmD with a single thioether bond and a bis -His ligand set revealed by a de novo crystal structural and spectroscopic study. Chem Sci, 12, 2021
8QAA	X-ray crystal structure of a de novo designed antiparallel coiled-coil 6-helix bundle with 4 heptad repeats, antiparallel 6-helix bundle-ALIA 分子名称: antiparallel 6-helix bundle-ALIA 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAB	X-ray crystal structure of a de novo designed antiparallel coiled-coil hexameric alpha-helical barrel with 4 heptad repeats, apCCHex 分子名称: 1-methoxy-2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethane, apCCHex 著者 Naudin, E.N, Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAI	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 7 inner helices, sc-CC-7-LI 分子名称: DI(HYDROXYETHYL)ETHER, sc-CC-7-LI 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAH	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 8 inner helices, sc-CC-8-58 分子名称: sc-CC-8-58 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QKD	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 5 inner helices, sc-CC-5-24 分子名称: DI(HYDROXYETHYL)ETHER, sc-CC-5-24 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-09-15 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAD	X-ray crystal structure of a de novo designed single-chain antiparallel 6-helix coiled-coil alpha-helical barrel, sc-apCC-6-LLIA 分子名称: DODECAETHYLENE GLYCOL, sc-apCC-6-LLIA 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAF	X-ray crystal structure of a de novo designed single-chain antiparallel 8-helix coiled-coil alpha-helical barrel, sc-apCC-8 分子名称: sc-apCC-8 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAE	X-ray crystal structure of a de novo designed single-chain antiparallel 6-helix alpha-helical barrel, sc-apCC-6-SLLA 分子名称: 2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2-hydroxyethyloxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol, PENTAETHYLENE GLYCOL, sc-apCC-6-SLLA 著者 Albanese, K.I, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAC	X-ray crystal structure of a de novo designed antiparallel coiled-coil 8-helix bundle with 4 heptad repeats, antiparallel 8-helix bundle-GLIA 分子名称: antiparallel 8-helix bundle-GLIA 著者 Albanese, K.I, Dawson, W.M, Petrenas, R, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
8QAG	X-ray crystal structure of a de novo designed single-chain parallel coiled-coil alpha-helical barrel with 6 inner helices, sc-CC-6-95 分子名称: DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, sc-CC-6-95 著者 Petrenas, R, Albanese, K.I, Woolfson, D.N. 登録日 2023-08-22 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Rationally seeded computational protein design of ɑ-helical barrels. Nat.Chem.Biol., 2024
4D8H	Crystal structure of Symfoil-4P/PV2: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 2 (6xLeu / PV1) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo protein 著者 Blaber, M, Longo, L. 登録日 2012-01-10 公開日 2013-01-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.901 Å) 主引用文献 Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA, 110, 2013
7UBF	Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in 50% d6-DMSO and 50% water with cis/trans switching (CC conformation, 50%) 分子名称: Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UBD	Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (A-CC conformation) 分子名称: Cyclic peptide D8.31 DAL-DPR-MLU-DVA-DAL-DPR-MLU-DVA 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UBI	Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in CDCl3 with cis/trans switching (TT conformation, 47%) 分子名称: Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UZL	Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (B-TC conformation) 分子名称: Cyclic peptide D9.16 DPR-MAA-ALA-DVA-MLE-LEU-LEU-PRO-DLE 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-05-09 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UBC	Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in d6-DMSO with cis/trans switching 分子名称: Cyclic peptide D9.16 DPR-MAA-ALA-DVA-MLE-LEU-LEU-PRO-DLE 著者 Ramelot, T.A, Tejero, R, Monteltione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UBE	Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in d6-DMSO with cis/trans switching 分子名称: Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UBG	Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (A-TT conformation) 分子名称: Cyclic peptide D9.16 DPR-MAA-ALA-DVA-MLE-LEU-LEU-PRO-DLE 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
7UBH	Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in CDCl3 with cis/trans switching 分子名称: Cyclic peptide D8.31 DAL-DPR-MLU-DVA-DAL-DPR-MLU-DVA 著者 Ramelot, T.A, Tejero, R, Montelione, G.T. 登録日 2022-03-14 公開日 2022-09-14 最終更新日 2022-09-28 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022
1KYC	CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE STABLIZED BY IONIC INTERACTIONS 分子名称: SIN-GLU-GLU-LEU-ARG-ARG-ARG-ILE-GLU-GLU-LEU-GLU-ARG-ARG-ILE-ARG-NH2, SUCCINIC ACID, SULFATE ION 著者 Burkhard, P, Ivaninskii, S, Lustig, A. 登録日 2002-02-04 公開日 2002-08-07 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Improving coiled-coil stability by optimizing ionic interactions. J.Mol.Biol., 318, 2002

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