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6JPI
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Crystal structure of PA4674 in complex with its operator DNA (28bp) from Pseudomonas aeruginosa
分子名称: DNA (28-MER), HTH cro/C1-type domain-containing protein
著者Liu, Y, Gao, Z, Zhang, H, Dong, Y.
登録日2019-03-27
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.143 Å)
主引用文献Crystal structure of PA4674 in complex with its operator DNA (28bp) from Pseudomonas aeruginosa
To Be Published
1SQ8
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BU of 1sq8 by Molmil
a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES
分子名称: dh434
著者Iwai, H, Wider, G, Wuthrich, K.
登録日2004-03-18
公開日2004-07-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of a Variant 434 Repressor DNA-binding Domain Devoid of Hydroxyl Groups
J.Biomol.Nmr, 29, 2004
4OB4
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BU of 4ob4 by Molmil
Structure of the S. venezulae BldD DNA-binding domain
分子名称: Putative DNA-binding protein
著者schumacher, M.A, Tschowri, N, Buttner, M, Brennan, R.
登録日2014-01-06
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development.
Cell(Cambridge,Mass.), 158, 2014
2GZU
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BU of 2gzu by Molmil
High-resolution structure determination of the CylR2 homodimer using intermonomer distances from paramagnetic relaxation enhancement and NMR dipolar couplings
分子名称: cytolysin regulator 2
著者Rumpel, S, Becker, S, Zweckstetter, M.
登録日2006-05-12
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献High-resolution structure determination of the CylR2 homodimer using paramagnetic relaxation enhancement and structure-based prediction of molecular alignment
J.Biomol.Nmr, 40, 2008
3KXA
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BU of 3kxa by Molmil
Crystal Structure of NGO0477 from Neisseria gonorrhoeae
分子名称: ASPARAGINE, CHLORIDE ION, Putative uncharacterized protein, ...
著者Ren, J, Sainsbury, S, Nettleship, J.E, Owens, R.J, Oxford Protein Production Facility (OPPF)
登録日2009-12-02
公開日2010-01-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif.
Proteins, 78, 2010
6JQ4
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HIGA Escherichia coli-K12
分子名称: Antitoxin HigA
著者She, Z, Xu, B.S.
登録日2019-03-28
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational changes of antitoxin HigA from Escherichia coli str. K-12 upon binding of its cognate toxin HigB reveal a new regulation mechanism in toxin-antitoxin systems.
Biochem.Biophys.Res.Commun., 514, 2019
7EWE
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Mycobacterium tuberculosis HigA2 (Form III)
分子名称: Putative antitoxin HigA2
著者Kim, H.J.
登録日2021-05-25
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献Chasing the structural diversity of the transcription regulator Mycobacterium tuberculosis HigA2.
Iucrj, 8, 2021
7EWD
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BU of 7ewd by Molmil
Mycobacterium tuberculosis HigA2 (Form II)
分子名称: Putative antitoxin HigA2
著者Kim, H.J.
登録日2021-05-25
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Chasing the structural diversity of the transcription regulator Mycobacterium tuberculosis HigA2.
Iucrj, 8, 2021
7EWC
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Mycobacterium tuberculosis HigA2 (Form I)
分子名称: Putative antitoxin HigA2
著者Kim, H.J.
登録日2021-05-25
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Chasing the structural diversity of the transcription regulator Mycobacterium tuberculosis HigA2.
Iucrj, 8, 2021
7CSV
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Pseudomonas aeruginosa antitoxin HigA
分子名称: HTH cro/C1-type domain-containing protein
著者Song, Y.J, Luo, G.H, Bao, R.
登録日2020-08-17
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Pseudomonas aeruginosa antitoxin HigA functions as a diverse regulatory factor by recognizing specific pseudopalindromic DNA motifs.
Environ.Microbiol., 23, 2021
4PU7
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Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 1.85
分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
2EWT
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BU of 2ewt by Molmil
Crystal structure of the DNA-binding domain of BldD
分子名称: SULFATE ION, putative DNA-binding protein
著者Kim, I.K, Lee, C.J, Kim, M.K, Kim, J.M, Kim, J.H, Yim, H.S, Cha, S.S, Kang, S.O.
登録日2005-11-07
公開日2006-06-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structure of the DNA-binding domain of BldD, a central regulator of aerial mycelium formation in Streptomyces coelicolor A3(2)
Mol.Microbiol., 60, 2006
1PER
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BU of 1per by Molmil
THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*GP*TP*TP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*AP*AP*CP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 REPRESSOR)
著者Rodgers, D.W, Harrison, S.C.
登録日1993-11-09
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites.
Structure, 1, 1993
3S8Q
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BU of 3s8q by Molmil
Crystal structure of the R-M controller protein C.Esp1396I OL operator complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*AP*CP*TP*TP*AP*TP*AP*GP*TP*CP*CP*GP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*GP*AP*CP*TP*AP*TP*AP*AP*GP*TP*CP*AP*CP*A)-3'), R-M CONTROLLER PROTEIN
著者McGeehan, J.E, Ball, N.J, Streeter, S.D, Thresh, S.-J, Kneale, G.G.
登録日2011-05-30
公開日2012-01-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.
Nucleic Acids Res., 40, 2012
3VK0
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BU of 3vk0 by Molmil
Crystal Structure of hypothetical transcription factor NHTF from Neisseria
分子名称: Transcriptional regulator
著者Wang, H.-C, Ko, T.-P, Wu, M.-L, Wu, H.-J, Ku, S.-C, Wang, A.H.-J.
登録日2011-11-01
公開日2012-03-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Neisseria conserved protein DMP19 is a DNA mimic protein that prevents DNA binding to a hypothetical nitrogen-response transcription factor
Nucleic Acids Res., 2012
3TRB
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BU of 3trb by Molmil
Structure of an addiction module antidote protein of a HigA (higA) family from Coxiella burnetii
分子名称: Virulence-associated protein I
著者Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
登録日2011-09-09
公開日2011-09-28
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3UFD
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BU of 3ufd by Molmil
C.Esp1396I bound to its highest affinity operator site OM
分子名称: CHLORIDE ION, DNA (5'-D(*AP*TP*GP*TP*AP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*TP*CP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*TP*AP*CP*A)-3'), ...
著者Ball, N.J, McGeehan, J.E, Streeter, S.D, Thresh, S.-J, Kneale, G.G.
登録日2011-11-01
公開日2012-07-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.
Nucleic Acids Res., 40, 2012
2LYQ
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BU of 2lyq by Molmil
NOE-based 3D structure of the monomeric intermediate of CylR2 at 262K (-11 Celsius degrees)
分子名称: CylR2
著者Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
登録日2012-09-19
公開日2013-02-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2LYR
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BU of 2lyr by Molmil
NOE-based 3D structure of the monomeric partially-folded intermediate of CylR2 at 259K (-14 Celsius degrees)
分子名称: CylR2
著者Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
登録日2012-09-19
公開日2013-02-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2LYP
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BU of 2lyp by Molmil
NOE-based 3D structure of the monomer of CylR2 in equilibrium with predissociated homodimer at 266K (-7 Celsius degrees)
分子名称: CylR2
著者Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
登録日2012-09-19
公開日2013-02-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2LYJ
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BU of 2lyj by Molmil
NOE-based 3D structure of the CylR2 homodimer at 298K
分子名称: CylR2
著者Jaremko, M, Jaremko, L, Kim, H, Cho, M, Giller, K, Becker, S, Zweckstetter, M, Schwieters, C.D.
登録日2012-09-19
公開日2013-02-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2LYK
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BU of 2lyk by Molmil
NOE-based 3D structure of the CylR2 homodimer at 270K (-3 Celsius degrees)
分子名称: CylR2
著者Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
登録日2012-09-19
公開日2013-02-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2JVL
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BU of 2jvl by Molmil
NMR structure of the C-terminal domain of MBF1 of Trichoderma reesei
分子名称: TrMBF1
著者Kopke Salinas, R, Tomaselli, S, Camilo, C.M, Valencia, E.Y, Farah, C.S, El-Dorry, H, Chambergo, F.S.
登録日2007-09-20
公開日2008-09-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the C-terminal domain of multiprotein bridging factor 1 (MBF1) of Trichoderma reesei.
Proteins, 75, 2009
2L49
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The solution structure of the P2 C,the immunity repressor of the P2 bacteriophage
分子名称: C protein
著者Massad, T, Papadopolos, E, Stenmark, P, Damberg, P.
登録日2010-10-01
公開日2010-10-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The C repressor of the P2 bacteriophage.
J.Biomol.Nmr, 64, 2016
2LYL
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BU of 2lyl by Molmil
NOE-based 3D structure of the predissociated homodimer of CylR2 in equilibrium with monomer at 266K (-7 Celsius degrees)
分子名称: CylR2
著者Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
登録日2012-09-19
公開日2013-02-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013

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