PDB: 289 件ウェブページステータス検索Chemie searchBIRD

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8CA4	Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2 N-domain). 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J. 登録日 2023-01-24 公開日 2023-12-20 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.25 Å) 主引用文献 Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse. Embo J., 43, 2024
7Z5O	W-formate dehydrogenase from Desulfovibrio vulgaris - Dithionite reduced form 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ... 著者 Mota, C, Oliveira, A.R, Klymanska, K, Pereira, I.C, Romao, M.J. 登録日 2022-03-09 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.527 Å) 主引用文献 Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB Reveals Stable Metal Coordination during Catalysis. Acs Chem.Biol., 17, 2022
8BED	Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI peripheral tip) 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Klusch, N, Kuehlbrandt, W. 登録日 2022-10-21 公開日 2023-01-11 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (2.03 Å) 主引用文献 Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution. Nat.Plants, 9, 2023
8BQH	W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1.5 min 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CHLORIDE ION, ... 著者 Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J. 登録日 2022-11-21 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation. Int J Mol Sci, 24, 2022
8BQI	W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 3 min 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ... 著者 Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J. 登録日 2022-11-21 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.356 Å) 主引用文献 Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation. Int J Mol Sci, 24, 2022
8BQG	W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ... 著者 Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J. 登録日 2022-11-21 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.946 Å) 主引用文献 Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation. Int J Mol Sci, 24, 2022
8BQL	W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Reoxidized by exposure to air for 12 min 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, ... 著者 Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J. 登録日 2022-11-21 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.906 Å) 主引用文献 Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation. Int J Mol Sci, 24, 2022
8BQK	W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 22 min 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ... 著者 Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J. 登録日 2022-11-21 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.587 Å) 主引用文献 Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation. Int J Mol Sci, 24, 2022
8BQJ	W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 5 min 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ... 著者 Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J. 登録日 2022-11-21 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.107 Å) 主引用文献 Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation. Int J Mol Sci, 24, 2022
7VW6	Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Yoshikawa, T, Makino, F, Miyata, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O. 登録日 2021-11-09 公開日 2022-06-01 最終更新日 2022-06-15 実験手法 ELECTRON MICROSCOPY (2.19 Å) 主引用文献 Multiple electron transfer pathways of tungsten-containing formate dehydrogenase in direct electron transfer-type bioelectrocatalysis. Chem.Commun.(Camb.), 58, 2022
7XQW	Formate dehydrogenase (FDH) from Methylobacterium extorquens AM1 (MeFDH1) 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Park, J, Heo, Y.Y, Roh, S.H, Lee, H.H. 登録日 2022-05-09 公開日 2023-08-09 実験手法 ELECTRON MICROSCOPY (2.83 Å) 主引用文献 Enzymatic conversion of CO2 in real flue gas to molar-scale formate To Be Published
4HEA	Crystal structure of the entire respiratory complex I from Thermus thermophilus 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Baradaran, R, Berrisford, J.M, Minhas, G.S, Sazanov, L.A. 登録日 2012-10-03 公開日 2013-02-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.3027 Å) 主引用文献 Crystal structure of the entire respiratory complex I. Nature, 494, 2013
2YBB	Fitted model for bovine mitochondrial supercomplex I1III2IV1 by single particle cryo-EM (EMD-1876) 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, CARDIOLIPIN, ... 著者 Althoff, T, Mills, D.J, Popot, J.-L, Kuehlbrandt, W. 登録日 2011-03-02 公開日 2011-10-19 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (19 Å) 主引用文献 Arrangement of Electron Transport Chain Components in Bovine Mitochondrial Supercomplex I(1)III(2)Iv(1). Embo J., 30, 2011
4AAY	Crystal Structure of the arsenite oxidase protein complex from Rhizobium species strain NT-26 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, AROA, AROB, ... 著者 Oke, M, Santini, J.M, Naismith, J.H. 登録日 2011-12-05 公開日 2012-12-12 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The Respiratory Arsenite Oxidase: Structure and the Role of Residues Surrounding the Rieske Cluster. Plos One, 8, 2013
8GZU	Cryo-EM structure of Tetrahymena thermophila respiratory Megacomplex MC (IV2+I+III2+II)2 分子名称: 2 iron, 2 sulfur cluster-binding protein, 2-oxoglutarate/malate carrier protein, ... 著者 Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L. 登録日 2022-09-27 公開日 2023-06-14 実験手法 ELECTRON MICROSCOPY (4.18 Å) 主引用文献 Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae. Nat Commun, 14, 2023
8GYM	Cryo-EM structure of Tetrahymena thermophila respiratory mega-complex MC IV2+(I+III2+II)2 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ... 著者 Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L. 登録日 2022-09-23 公開日 2023-06-14 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae. Nat Commun, 14, 2023
5NQD	Arsenite oxidase AioAB from Rhizobium sp. str. NT-26 mutant AioBF108A 分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ... 著者 Santos-Silva, T, Romao, M, Vieira, M, Marques, A.T. 登録日 2017-04-20 公開日 2018-05-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Arsenite oxidase AioAB from Rhizobium sp. str. NT-26 mutant AioBF108A To Be Published
5O31	Mitochondrial complex I in the deactive state 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Blaza, J.N, Vinothkumar, K.R, Hirst, J. 登録日 2017-05-23 公開日 2018-01-17 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (4.13 Å) 主引用文献 Structure of the Deactive State of Mammalian Respiratory Complex I. Structure, 26, 2018
1KQF	FORMATE DEHYDROGENASE N FROM E. COLI 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CARDIOLIPIN, FORMATE DEHYDROGENASE, ... 著者 Jormakka, M, Tornroth, S, Byrne, B, Iwata, S. 登録日 2002-01-05 公開日 2002-03-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Molecular basis of proton motive force generation: structure of formate dehydrogenase-N. Science, 295, 2002
1KQG	FORMATE DEHYDROGENASE N FROM E. COLI 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, CARDIOLIPIN, ... 著者 Jormakka, M, Tornroth, S, Byrne, B, Iwata, S. 登録日 2002-01-05 公開日 2002-03-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular basis of proton motive force generation: structure of formate dehydrogenase-N. Science, 295, 2002
5T5I	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, ORTHORHOMBIC FORM AT 1.9 A 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CALCIUM ION, GLYCEROL, ... 著者 Wagner, T, Ermler, U, Shima, S. 登録日 2016-08-31 公開日 2016-10-19 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science, 354, 2016
5T5M	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, TRIGONAL FORM AT 2.5 A. 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ... 著者 Wagner, T, Ermler, U, Shima, S. 登録日 2016-08-31 公開日 2016-10-19 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science, 354, 2016
5GPN	Architecture of mammalian respirasome 分子名称: Acyl carrier protein, COPPER (II) ION, Cytochrome b, ... 著者 Gu, J, Wu, M, Guo, R, Yang, M. 登録日 2016-08-03 公開日 2017-04-05 最終更新日 2017-04-12 実験手法 ELECTRON MICROSCOPY (5.4 Å) 主引用文献 The architecture of the mammalian respirasome. Nature, 537, 2016
5GUP	Cryo-EM structure of mammalian respiratory supercomplex I1III2IV1 分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ... 著者 Gu, J, Wu, M, Guo, R, Yang, M. 登録日 2016-08-30 公開日 2017-03-29 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structure of Mammalian Respiratory Supercomplex I1III2IV1 Cell, 167, 2016
2FUG	Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Sazanov, L.A, Hinchliffe, P. 登録日 2006-01-26 公開日 2006-02-14 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus. Science, 311, 2006

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