PDB: 37819 件ウェブページステータス検索Chemie searchBIRD

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5XF6	Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane) compound having an ethylenediamine linker 分子名称: DNA (145-MER), ETHANE-1,2-DIAMINE, Histone H2A, ... 著者 Ma, Z, Adhireksan, Z, Murray, B.S, Dyson, P.J, Davey, C.A. 登録日 2017-04-07 公開日 2017-10-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation Nat Commun, 8, 2017
2VPP	Drosophila melanogaster deoxyribonucleoside kinase successfully activates gemcitabine in transduced cancer cell lines 分子名称: DEOXYNUCLEOSIDE KINASE, GEMCITABINE, SULFATE ION 著者 Knecht, W, Mikkelsen, N.E, Clausen, A, Willer, M, Gojkovic, Z, Piskur, J. 登録日 2008-03-03 公開日 2009-03-24 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Drosophila Melanogaster Deoxyribonucleoside Kinase Activates Gemcitabine. Biochem.Biophys.Res.Commun., 382, 2009
5MQF	Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ATP-dependent RNA helicase DHX8, Cell division cycle 5-like protein, ... 著者 Bertram, K, Hartmuth, K, Kastner, B. 登録日 2016-12-20 公開日 2017-03-22 最終更新日 2018-11-21 実験手法 ELECTRON MICROSCOPY (5.9 Å) 主引用文献 Cryo-EM structure of a human spliceosome activated for step 2 of splicing. Nature, 542, 2017
6G90	Prespliceosome structure provides insight into spliceosome assembly and regulation (map A2) 分子名称: 56 kDa U1 small nuclear ribonucleoprotein component, Cold sensitive U2 snRNA suppressor 1, Pre-mRNA-processing factor 39, ... 著者 Plaschka, C, Lin, P.-C, Charenton, C, Nagai, K. 登録日 2018-04-10 公開日 2018-08-22 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Prespliceosome structure provides insights into spliceosome assembly and regulation. Nature, 559, 2018
1F8Y	CRYSTAL STRUCTURE ANALYSIS OF NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE COMPLEXED WITH 5-METHYL-2'-DEOXYPSEUDOURIDINE 分子名称: 2'-deoxy-1-methyl-pseudouridine, NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE 著者 Armstrong, S.R, Cook, W.J, Short, S.A, Ealick, S.E. 登録日 2000-07-05 公開日 2000-08-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of nucleoside 2-deoxyribosyltransferase in native and ligand-bound forms reveal architecture of the active site. Structure, 4, 1996
4UOF	Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with dADP 分子名称: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Lopez-Zavala, A.A, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R. 登録日 2014-06-03 公開日 2014-09-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.102 Å) 主引用文献 Structure of Nucleoside Diphosphate Kinase from the Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates Acta Crystallogr.,Sect.F, 79, 2014
4UOG	Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with dCDP 分子名称: DEOXYCYTIDINE DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Lopez-Zavala, A.A, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R. 登録日 2014-06-03 公開日 2014-09-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates Acta Crystallogr.,Sect.F, 79, 2014
4UOH	Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Lopez-Zavala, A.A, Guevara-Hernandez, E, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R. 登録日 2014-06-03 公開日 2014-09-10 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.007 Å) 主引用文献 Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates Acta Crystallogr.,Sect.F, 79, 2014
1EHW	HUMAN NUCLEOSIDE DIPHOSPHATE KINASE 4 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION 著者 Milon, L, Meyer, P, Chiadmi, M, Munier, A, Johansson, M, Karlsson, A, Lascu, I, Capeau, J, Janin, J, Lacombe, M.-L. 登録日 2000-02-23 公開日 2000-05-17 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The human nm23-H4 gene product is a mitochondrial nucleoside diphosphate kinase. J.Biol.Chem., 275, 2000
5OLN	X-Ray Structure of the Complex Pyrimidine-nucleoside phosphorylase from Bacillus subtilis at 1.88 A 分子名称: 1,2-ETHANEDIOL, IMIDAZOLE, Pyrimidine-nucleoside phosphorylase, ... 著者 Balaev, V.V, Prokofev, I.I, Gabdoulkhakov, A.G, Betzel, C, Lashkov, A.A. 登録日 2017-07-28 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structure of pyrimidine-nucleoside phosphorylase from Bacillus subtilis in complex with imidazole and sulfate. Acta Crystallogr F Struct Biol Commun, 74, 2018
1BUX	3'-PHOSPHORYLATED NUCLEOTIDES BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE 分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Xu, Y, Schneider, B, Deville-Bonne, D, Veron, M, Janin, J. 登録日 1998-09-07 公開日 1999-04-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 3'-Phosphorylated nucleotides are tight binding inhibitors of nucleoside diphosphate kinase activity. J.Biol.Chem., 273, 1998
8QND	Crystal structure of the ribonucleoside hydrolase C from Lactobacillus reuteri 分子名称: CALCIUM ION, Inosine-uridine nucleoside N-ribohydrolase 著者 Matyuta, I.O, Minyaev, M.E, Shaposhnikov, L.A, Pometun, A.A, Tishkov, V.I, Popov, V.O, Boyko, K.M. 登録日 2023-09-26 公開日 2023-12-20 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-Functional Examination of Novel Ribonucleoside Hydrolase C (RihC) from Limosilactobacillus reuteri LR1. Int J Mol Sci, 25, 2023
3ZTQ	Hexagonal crystal form P61 of the Aquifex aeolicus nucleoside diphosphate kinase 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-02-29 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus Proteins, 80, 2012
3ZTO	Orthorhombic crystal form C222 of the Aquifex aeolicus nucleoside diphosphate kinase 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-03-14 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 An Intersubunit Disulfide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus. Proteins, 80, 2012
3ZTS	Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FINAL STAGE OF RADIATION DAMAGE) 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-03-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus Proteins, 80, 2012
3ZTR	Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FIRST STAGE OF RADIATION DAMAGE) 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A. 登録日 2011-07-12 公開日 2012-03-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus Proteins, 80, 2012
4ANC	CRYSTAL FORM I OF THE D93N MUTANT OF NUCLEOSIDE DIPHOSPHATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Georgescauld, F, Moynie, L, Habersetzer, J, Lascu, I, Dautant, A. 登録日 2012-03-16 公開日 2013-03-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Intersubunit Ionic Interactions Stabilize the Nucleoside Diphosphate Kinase of Mycobacterium Tuberculosis. Plos One, 8, 2013
4AND	CRYSTAL FORM II OF THE D93N MUTANT OF NUCLEOSIDE DIPHOSPHATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Georgescauld, F, Moynie, L, Habersetzer, J, Lascu, I, Dautant, A. 登録日 2012-03-16 公開日 2013-03-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.808 Å) 主引用文献 Intersubunit Ionic Interactions Stabilize the Nucleoside Diphosphate Kinase of Mycobacterium Tuberculosis. Plos One, 8, 2013
2MAS	PURINE NUCLEOSIDE HYDROLASE WITH A TRANSITION STATE INHIBITOR 分子名称: 2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL, CALCIUM ION, INOSINE-URIDINE NUCLEOSIDE N-RIBOHYDROLASE 著者 Degano, M, Schramm, V.L, Sacchettini, J.C. 登録日 1996-10-17 公開日 1997-08-12 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Trypanosomal nucleoside hydrolase. A novel mechanism from the structure with a transition-state inhibitor. Biochemistry, 37, 1998
2AZ3	Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum in complex with CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 著者 Besir, H, Zeth, K, Bracher, A, Heider, U, Ishibashi, M, Tokunaga, M, Oesterhelt, D. 登録日 2005-09-09 公開日 2005-12-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum Febs Lett., 579, 2005
2AZ1	Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum 分子名称: CALCIUM ION, Nucleoside diphosphate kinase 著者 Besir, H, Zeth, K, Bracher, A, Heider, U, Ishibashi, M, Tokunaga, M, Oesterhelt, D. 登録日 2005-09-09 公開日 2005-12-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum Febs Lett., 579, 2005
2NCK	CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Williams, R.L, Oren, D.A, Arnold, E. 登録日 1993-11-15 公開日 1994-01-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 A resolution. J.Mol.Biol., 234, 1993
7ZL8	NME1 in complex with succinyl-CoA 分子名称: Nucleoside diphosphate kinase A, SUCCINYL-COENZYME A 著者 Garcia-Saez, I, Iuso, D, Khochbin, S, Petosa, C. 登録日 2022-04-14 公開日 2023-08-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Nucleoside diphosphate kinases 1 and 2 regulate a protective liver response to a high-fat diet. Sci Adv, 9, 2023
5DW7	Crystal structure of the unliganded geosmin synthase N-terminal domain from Streptomyces coelicolor 分子名称: Germacradienol/geosmin synthase 著者 Lombardi, P.M, Harris, G.G, Pemberton, T.A, Matsui, T, Weiss, T.M, Cole, K.E, Koksal, M, Murphy, F.V, Vedula, L.S, Chou, W.K, Cane, D.E, Christianson, D.W. 登録日 2015-09-22 公開日 2015-11-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.202 Å) 主引用文献 Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alpha alpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence. Biochemistry, 54, 2015
1NCL	THERMAL STABILITY OF HEXAMERIC AND TETRAMERIC NUCLEOSIDE, DIPHOSPHATE KINASES 分子名称: NUCLEOSIDE DIPHOSPHATE KINASE 著者 Janin, J, Morera, S, Lascu, I. 登録日 1996-03-22 公開日 1996-11-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Thermal stability of hexameric and tetrameric nucleoside diphosphate kinases. Effect of subunit interaction. J.Biol.Chem., 271, 1996

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