6AEK
 
 | | Crystal structure of ENPP1 in complex with pApG | | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ... | | 著者 | Kato, K, Nishimasu, H, Hirano, S, Hirano, H, Ishitani, R, Nureki, O. | | 登録日 | 2018-08-05 | | 公開日 | 2019-03-06 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structural insights into cGAMP degradation by Ecto-nucleotide pyrophosphatase phosphodiesterase 1.
Nat Commun, 9, 2018
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1JAX
 | | Structure of Coenzyme F420H2:NADP+ Oxidoreductase (FNO) | | 分子名称: | MAGNESIUM ION, SODIUM ION, conserved hypothetical protein | | 著者 | Warkentin, E, Mamat, B, Thauer, R, Ermler, U, Shima, S. | | 登録日 | 2001-06-01 | | 公開日 | 2001-12-21 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structures of F420H2:NADP+ oxidoreductase with and without its substrates bound.
EMBO J., 20, 2001
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8RRV
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1JB8
 | | The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular Intercalation | | 分子名称: | 5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3', 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | | 著者 | Han, G.W, Kopka, M.L, Langs, D, Dickerson, R.E. | | 登録日 | 2001-06-02 | | 公開日 | 2003-07-01 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | | 主引用文献 | Crystal structure of an RNADNA hybrid reveals intermolecular
intercalation: Dimer formation by base-pair swapping
Proc.Natl.Acad.Sci.USA, 100, 2003
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1JBH
 | | Solution structure of cellular retinol binding protein type-I in the ligand-free state | | 分子名称: | CELLULAR RETINOL-BINDING PROTEIN TYPE I | | 著者 | Franzoni, L, Luecke, C, Perez, C, Cavazzini, D, Rademacher, M, Ludwig, C, Spisni, A, Rossi, G.L, Rueterjans, H. | | 登録日 | 2001-06-04 | | 公開日 | 2002-06-19 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure and backbone dynamics of Apo- and holo-cellular retinol-binding protein in solution.
J.Biol.Chem., 277, 2002
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1SH3
 | | Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form) | | 分子名称: | MAGNESIUM ION, RNA Polymerase | | 著者 | Ng, K.K, Pendas-Franco, N, Rojo, J, Boga, J.A, Machin, A, Alonso, J.M, Parra, F. | | 登録日 | 2004-02-24 | | 公開日 | 2004-03-09 | | 最終更新日 | 2023-08-23 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Crystal structure of norwalk virus polymerase reveals the carboxyl terminus in the active site cleft.
J.Biol.Chem., 279, 2004
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6A0K
 | | Cyclic alpha-maltosyl-(1-->6)-maltose hydrolase from Arthrobacter globiformis, complex with panose | | 分子名称: | CALCIUM ION, Cyclic maltosyl-maltose hydrolase, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... | | 著者 | Kohno, M, Arakawa, T, Mori, T, Nishimoto, T, Fushinobu, S. | | 登録日 | 2018-06-05 | | 公開日 | 2018-09-12 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | | 主引用文献 | Structural features of a bacterial cyclic alpha-maltosyl-(1→6)-maltose (CMM) hydrolase critical for CMM recognition and hydrolysis.
J. Biol. Chem., 293, 2018
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1JCX
 | | Aquifex aeolicus KDO8P synthase in complex with API and Cadmium | | 分子名称: | 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, {[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-TETRAHYDROXY-6-PHOSPHONOOXY-HEXYL)-AMINO]-METHYL}-PHOSPHONIC ACID | | 著者 | Wang, J, Duewel, H.S, Woodard, R.W, Gatti, D.L. | | 登録日 | 2001-06-11 | | 公開日 | 2002-01-16 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structures of Aquifex aeolicus KDO8P synthase in complex with R5P and PEP, and with a bisubstrate inhibitor: role of active site water in catalysis.
Biochemistry, 40, 2001
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1SMS
 | | Structure of the Ribonucleotide Reductase Rnr4 Homodimer from Saccharomyces cerevisiae | | 分子名称: | MERCURY (II) ION, Ribonucleoside-diphosphate reductase small chain 2 | | 著者 | Sommerhalter, M, Voegtli, W.C, Perlstein, D.L, Ge, J, Stubbe, J, Rosenzweig, A.C. | | 登録日 | 2004-03-09 | | 公開日 | 2004-08-10 | | 最終更新日 | 2023-08-23 | | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | | 主引用文献 | Structures of the yeast ribonucleotide reductase Rnr2 and Rnr4 homodimers.
Biochemistry, 43, 2004
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8R6P
 | | Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA, HelD N-terminal domain and open promoter DNA | | 分子名称: | DNA 50-MER, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | | 著者 | Koval, T, Krasny, L, Dohnalek, J, Kouba, T. | | 登録日 | 2023-11-22 | | 公開日 | 2024-10-02 | | 実験手法 | ELECTRON MICROSCOPY (3.16 Å) | | 主引用文献 | Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
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1JD6
 | | Crystal Structure of DIAP1-BIR2/Hid Complex | | 分子名称: | APOPTOSIS 1 INHIBITOR, ZINC ION, head involution defective protein | | 著者 | Wu, J.W, Cocina, A.E, Chai, J, Hay, B.A, Shi, Y. | | 登録日 | 2001-06-12 | | 公開日 | 2001-12-05 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structural analysis of a functional DIAP1 fragment bound to grim and hid peptides.
Mol.Cell, 8, 2001
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1JDG
 | | Solution Structure of a Trans-Opened (10S)-dA Adduct of (+)-(7S,8R,9S,10R)-7,8-Dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a fully Complementary DNA Duplex | | 分子名称: | 5'-D(*CP*CP*TP*CP*GP*TP*GP*AP*CP*CP*G)-3', 5'-D(*CP*GP*GP*TP*CP*(BPA)AP*CP*GP*AP*GP*G)-3', 7S,8R,9R-TRIHYDROXY-7,8,9,10-TETRAHYDRO BENZO[A]PYRENE | | 著者 | Pradhan, P, Tirumala, S, Liu, X, Sayer, J.M, Jerina, D.M, Yeh, H.J.C. | | 登録日 | 2001-06-13 | | 公開日 | 2001-07-04 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of a trans-opened (10S)-dA adduct of (+)-(7S,8R,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a fully complementary DNA duplex: evidence for a major syn conformation.
Biochemistry, 40, 2001
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1J9J
 | | CRYSTAL STRUCTURE ANALYSIS OF SURE PROTEIN FROM T.MARITIMA | | 分子名称: | MAGNESIUM ION, STATIONARY PHASE SURVIVAL PROTEIN, SULFATE ION | | 著者 | Suh, S.W, Lee, J.Y, Kwak, J.E, Moon, J. | | 登録日 | 2001-05-27 | | 公開日 | 2001-09-12 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure and functional analysis of the SurE protein identify a novel phosphatase family.
Nat.Struct.Biol., 8, 2001
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1JA4
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6AG0
 | | The X-ray Crystallographic Structure of Maltooligosaccharide-forming Amylase from Bacillus stearothermophilus STB04 | | 分子名称: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase, CALCIUM ION | | 著者 | Li, Z.F, Li, Y.L, Ban, X.F, Zhang, C.Y, Jin, T.C, Xie, X.F, Gu, Z.B, Li, C.M. | | 登録日 | 2018-08-09 | | 公開日 | 2018-10-10 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structure of a maltooligosaccharide-forming amylase from Bacillus stearothermophilus STB04.
Int.J.Biol.Macromol., 138, 2019
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8S8E
 | | Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-3.1) | | 分子名称: | 18S ribosomal RNA, 40S ribosomal protein L41-A, 40S ribosomal protein S12, ... | | 著者 | Villamayor-Belinchon, L, Sharma, P, Llacer, J.L, Hussain, T. | | 登録日 | 2024-03-06 | | 公開日 | 2024-09-11 | | 実験手法 | ELECTRON MICROSCOPY (3.85 Å) | | 主引用文献 | Structural basis of AUC codon discrimination during translation initiation in yeast.
Nucleic Acids Res., 2024
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1JAA
 | | Solution structure of lactam analogue (DapE) of HIV gp41 600-612 loop. | | 分子名称: | DapE : (Ace)IWG(Dap)SGKLIETTA ANALOGUE OF HIV GP41 | | 著者 | Phan Chan Du, A, Limal, D, Semetey, V, Dali, H, Jolivet, M, Desgranges, C, Cung, M.T, Briand, J.P, Petit, M.C, Muller, S. | | 登録日 | 2001-05-30 | | 公開日 | 2003-07-01 | | 最終更新日 | 2021-10-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural and immunological characterisation of heteroclitic peptide analogues corresponding to the 600-612 region of the HIV envelope gp41 glycoprotein.
J.Mol.Biol., 323, 2002
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8S0C
 | | H. sapiens ORC1-5 bound to double stranded DNA as part of the MCM-ORC complex | | 分子名称: | DNA (26-mer), Isoform 2 of Origin recognition complex subunit 3, MAGNESIUM ION, ... | | 著者 | Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A. | | 登録日 | 2024-02-13 | | 公開日 | 2024-10-02 | | 実験手法 | ELECTRON MICROSCOPY (4 Å) | | 主引用文献 | MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
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1JAS
 | | HsUbc2b | | 分子名称: | UBIQUITIN-CONJUGATING ENZYME E2-17 KDA | | 著者 | Miura, T, Klaus, W, Ross, A, Guentert, P, Senn, H. | | 登録日 | 2001-05-31 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The NMR structure of the class I human ubiquitin-conjugating enzyme 2b
J.Biomol.NMR, 22, 2002
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8S0A
 | | H. sapiens MCM2-7 hexamer bound to double stranded DNA | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (22-mer), ... | | 著者 | Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A. | | 登録日 | 2024-02-13 | | 公開日 | 2024-10-02 | | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | | 主引用文献 | MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
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1SNA
 | | An Oligomeric Domain-Swapped Beta-Beta-Alpha Mini-Protein | | 分子名称: | ISOPROPYL ALCOHOL, tetrameric beta-beta-alpha mini-protein | | 著者 | Ali, M.H, Peisach, E, Allen, K.N, Imperiali, B. | | 登録日 | 2004-03-10 | | 公開日 | 2004-08-17 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | X-ray structure analysis of a designed oligomeric miniprotein reveals a discrete quaternary architecture.
Proc.Natl.Acad.Sci.Usa, 101, 2004
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8S0F
 | | H. sapiens OC1M bound to double stranded DNA | | 分子名称: | DNA (39-mer), DNA replication factor Cdt1, DNA replication licensing factor MCM2, ... | | 著者 | Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A. | | 登録日 | 2024-02-13 | | 公開日 | 2024-10-02 | | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | | 主引用文献 | MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
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1SNE
 | | An Oligomeric Domain-Swapped Beta-Beta-Alpha Mini-Protein | | 分子名称: | ISOPROPYL ALCOHOL, tetrameric beta-beta-alpha mini-protein | | 著者 | Ali, M.H, Peisach, E, Allen, K.N, Imperiali, B. | | 登録日 | 2004-03-10 | | 公開日 | 2004-08-17 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | X-ray structure analysis of a designed oligomeric miniprotein reveals a discrete quaternary architecture.
Proc.Natl.Acad.Sci.Usa, 101, 2004
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8S0D
 | | H. sapiens MCM bound to double stranded DNA and ORC1-6 | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, DNA (58-mer), DNA replication licensing factor MCM2, ... | | 著者 | Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A. | | 登録日 | 2024-02-13 | | 公開日 | 2024-10-02 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
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1JCJ
 | | OBSERVATION OF COVALENT INTERMEDIATES IN AN ENZYME MECHANISM AT ATOMIC RESOLUTION | | 分子名称: | 1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE, DEOXYRIBOSE-PHOSPHATE ALDOLASE | | 著者 | Heine, A, DeSantis, G, Luz, J.G, Mitchell, M, Wong, C.-H, Wilson, I.A. | | 登録日 | 2001-06-09 | | 公開日 | 2001-10-31 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | | 主引用文献 | Observation of covalent intermediates in an enzyme mechanism at atomic resolution.
Science, 294, 2001
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