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5ZM4
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Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AndA with preandiloid C
分子名称: (6aS,8aR,12aS,12bR,13aR)-5,6a,9,9,12a,13a-hexamethyl-7,8,8a,9,12a,12b,13,13a-octahydro-3H-benzo[a]furo[3,4-j]xanthene-3,4,10(1H,6aH)-trione, 2-OXOGLUTARIC ACID, Dioxygenase andA, ...
著者Nakashima, Y, Senda, T.
登録日2018-04-01
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and Computational Bases for Dramatic Skeletal Rearrangement in Anditomin Biosynthesis.
J. Am. Chem. Soc., 140, 2018
4WX1
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Structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant F66A determined from a crystal soaked with UDP-Galactopyranose
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
著者Qureshi, I.A, Chaudhary, R.
登録日2014-11-13
公開日2014-12-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Contributions of Unique Active Site Residues of Eukaryotic UDP-Galactopyranose Mutases to Substrate Recognition and Active Site Dynamics.
Biochemistry, 53, 2014
4YBM
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Crystal structure of TRIM24 PHD-bromodomain complexed with N-{6-[3-(benzyloxy)phenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-3,4-dimethoxybenzene-1-sulfonamide (7b)
分子名称: GLYCEROL, N-{6-[3-(benzyloxy)phenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl}-3,4-dimethoxybenzenesulfonamide, SULFATE ION, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-18
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
4YB7
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Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni in complex with ATP
分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ATP phosphoribosyltransferase, ...
著者Mittelstaedt, G, Moggre, G.-J, Parker, E.J.
登録日2015-02-18
公開日2016-03-09
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Campylobacter jejuni adenosine triphosphate phosphoribosyltransferase is an active hexamer that is allosterically controlled by the twisting of a regulatory tail.
Protein Sci., 25, 2016
5YYB
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Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Gc
分子名称: N-glycolyl-beta-neuraminic acid, Putative ABC transporter periplasmic binding protein
著者Subramanian, R, Setty, T.G.
登録日2017-12-08
公開日2018-10-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.484 Å)
主引用文献Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi.
J. Biol. Chem., 293, 2018
5Z01
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Native Escherichia coli L,D-carboxypeptidase A (LdcA)
分子名称: MAGNESIUM ION, Murein tetrapeptide carboxypeptidase
著者Meyer, K, Tame, J.R.H.
登録日2017-12-18
公開日2018-04-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018
5YZO
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Crystal structure of S9 peptidase mutant (S514A) from Deinococcus radiodurans R1
分子名称: Acyl-peptide hydrolase, putative, DIMETHYL SULFOXIDE, ...
著者Yadav, P, Jamdar, S.N, Kumar, A, Ghosh, B, Makde, R.D.
登録日2017-12-15
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
4YF0
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HU38-19bp
分子名称: DNA-binding protein HU-alpha, synthetic DNA strand
著者Hammel, M, Reyes, F.E, Parpana, R, Tainer, J.A, Adhya, S, Amlanjyoti, D.
登録日2015-02-24
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献HU multimerization shift controls nucleoid compaction.
Sci Adv, 2, 2016
4YEL
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Tailspike protein double mutant D339A/E372A of E. coli bacteriophage HK620 in complex with hexasaccharide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, SODIUM ION, ...
著者Gohlke, U, Broeker, N.K, Heinemann, U, Seckler, R, Barbirz, S.
登録日2015-02-24
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Enthalpic cost of water removal from a hydrophobic glucose binding cavity on HK620 tailspike protein.
to be published
4YHE
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NATIVE BACTEROIDETES-AFFILIATED GH5 CELLULASE LINKED WITH A POLYSACCHARIDE UTILIZATION LOCUS
分子名称: GH5
著者Naas, A.E, MacKenzie, A.K, Dalhus, B, Eijsink, V.G.H, Pope, P.B.
登録日2015-02-27
公開日2015-05-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Features of a Bacteroidetes-Affiliated Cellulase Linked with a Polysaccharide Utilization Locus.
Sci Rep, 5, 2015
4YLE
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Crystal structure of an ABC transpoter solute binding protein (IPR025997) from Burkholderia multivorans (Bmul_1631, Target EFI-511115) with an unknown ligand modelled as alpha-D-erythrofuranose
分子名称: Periplasmic binding protein/LacI transcriptional regulator, UNKNOWN LIGAND
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Koss, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2015-03-05
公開日2015-04-15
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of an ABC transporter solute binding protein (IPR025997) from Burkholderia multivorans (Bmul_1631, Target EFI-511115) with an unknown ligand modelled as alpha-D-erythrofuranose
To be published
4YMG
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Crystal structure of SAM-bound Podospora anserina methyltransferase PaMTH1
分子名称: MAGNESIUM ION, PHOSPHATE ION, Putative SAM-dependent O-methyltranferase, ...
著者Kudlinzki, D, Linhard, V.L, Chatterjee, D, Saxena, K, Sreeramulu, S, Schwalbe, H.
登録日2015-03-06
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structure and Biophysical Characterization of the S-Adenosylmethionine-dependent O-Methyltransferase PaMTH1, a Putative Enzyme Accumulating during Senescence of Podospora anserina.
J.Biol.Chem., 290, 2015
4YIQ
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Structure of the CEACAM6-CEACAM8 heterodimer
分子名称: CHLORIDE ION, Carcinoembryonic antigen-related cell adhesion molecule 6, Carcinoembryonic antigen-related cell adhesion molecule 8, ...
著者Bonsor, D.A, Sundberg, E.J.
登録日2015-03-02
公開日2015-10-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Diverse oligomeric states of CEACAM IgV domains.
Proc.Natl.Acad.Sci.USA, 112, 2015
5ZB8
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BU of 5zb8 by Molmil
Crystal structure of the novel lesion-specific endonuclease PfuEndoQ from Pyrococcus furiosus
分子名称: PfuEndoQ, SAMARIUM (III) ION, ZINC ION
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2018-02-10
公開日2018-04-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the novel lesion-specific endonuclease PfuEndoQ from Pyrococcus furiosus.
Nucleic Acids Res., 46, 2018
5Z5U
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BU of 5z5u by Molmil
The first bromodomain of BRD4 with compound BDF-2254
分子名称: 2-amino-4-(1H-imidazol-1-yl)quinoline-6,8-diol, Bromodomain-containing protein 4
著者Zhang, H, Luo, C.
登録日2018-01-20
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.631 Å)
主引用文献Development and evaluation of a novel series of Nitroxoline-derived BET inhibitors with antitumor activity in renal cell carcinoma.
Oncogenesis, 7, 2018
5Z6O
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BU of 5z6o by Molmil
Crystal structure of Penicillium cyclopium protease
分子名称: CALCIUM ION, phenylmethanesulfonic acid, protease
著者Ko, T.-P, Koszelak, S, Ng, J, Day, J, Greenwood, A, McPherson, A.
登録日2018-01-24
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The crystallographic structure of the subtilisin protease from Penicillium cyclopium.
Biochemistry, 36, 1997
5ZEF
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BU of 5zef by Molmil
Crystal structure of Entamoeba histolytica Arginase in complex with L- Norvaline at 2.01 A
分子名称: 1,2-ETHANEDIOL, Arginase, GLYCEROL, ...
著者Malik, A, Dalal, V, Ankri, S, Tomar, S.
登録日2018-02-27
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural insights into Entamoeba histolytica arginase and structure-based identification of novel non-amino acid based inhibitors as potential antiamoebic molecules.
Febs J., 286, 2019
5Z98
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BU of 5z98 by Molmil
Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex
分子名称: Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like protein 3H, RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*CP*CP*GP*GP*GP*UP*A)-3'), ...
著者Matsuoka, T, Nagae, T, Ode, H, Watanabe, N, Iwatani, Y.
登録日2018-02-02
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
Nucleic Acids Res., 46, 2018
5ZA0
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A cryo-protectant induces the conformational change of glyceraldehyde-3-phosphate dehydrogenase
分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Kim, Y.J.
登録日2018-02-06
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A cryoprotectant induces conformational change in glyceraldehyde-3-phosphate dehydrogenase.
Acta Crystallogr F Struct Biol Commun, 74, 2018
4YSF
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Resting state of rat cysteine dioxygenase H155N variant
分子名称: Cysteine dioxygenase type 1, FE (II) ION
著者Fellner, M, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M.
登録日2015-03-17
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Resting state of rat cysteine dioxygenase H155N variant
To be published
4YNI
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Iron free succinate bound rat cysteine dioxygenase
分子名称: Cysteine dioxygenase type 1, SODIUM ION, SUCCINIC ACID
著者Fellner, M, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M.
登録日2015-03-10
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.404 Å)
主引用文献Iron free succinate bound rat cysteine dioxygenase
To be published
4YON
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P-Rex1:Rac1 complex
分子名称: Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein, Ras-related C3 botulinum toxin substrate 1
著者Lucato, C.M, Whisstock, J.C, Ellisdon, A.M.
登録日2015-03-11
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Phosphatidylinositol (3,4,5)-Trisphosphate-dependent Rac Exchanger 1Ras-related C3 Botulinum Toxin Substrate 1 (P-Rex1Rac1) Complex Reveals the Basis of Rac1 Activation in Breast Cancer Cells.
J.Biol.Chem., 290, 2015
4YX5
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SpaO(SPOA1,2)
分子名称: CHLORIDE ION, Surface presentation of antigens protein SpaO
著者Notti, R.Q, Stebbins, C.E.
登録日2015-03-22
公開日2015-06-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9001 Å)
主引用文献A common assembly module in injectisome and flagellar type III secretion sorting platforms.
Nat Commun, 6, 2015
5ZOJ
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Crystal structure of human SMAD2-MAN1 complex
分子名称: Inner nuclear membrane protein Man1, Mothers against decapentaplegic homolog 2
著者Miyazono, K, Ohno, Y, Ito, T, Tanokura, M.
登録日2018-04-13
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.794 Å)
主引用文献Structural basis for receptor-regulated SMAD recognition by MAN1
Nucleic Acids Res., 46, 2018
4YRL
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Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 4-(methylsulfanyl)aniline (Chem 262)
分子名称: 1,2-ETHANEDIOL, 4-(methylsulfanyl)aniline, DIMETHYL SULFOXIDE, ...
著者Koh, C.-Y, Hol, W.G.J.
登録日2015-03-15
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A binding hotspot in Trypanosoma cruzi histidyl-tRNA synthetase revealed by fragment-based crystallographic cocktail screens.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015

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