Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6IR5
DownloadVisualize
BU of 6ir5 by Molmil
P domain of GII.3-TV24
分子名称: VP1 Capsid protein
著者Yang, Y.
登録日2018-11-10
公開日2019-11-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of host ligand specificity change of GII porcine noroviruses from their closely related GII human noroviruses.
Emerg Microbes Infect, 8, 2019
7T4D
DownloadVisualize
BU of 7t4d by Molmil
Pore structure of pore-forming toxin Epx4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Epx4
著者Xiong, X.Z, Dong, M, Yang, P, Abraham, J.
登録日2021-12-09
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Emerging enterococcus pore-forming toxins with MHC/HLA-I as receptors.
Cell, 185, 2022
8G6G
DownloadVisualize
BU of 8g6g by Molmil
H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 5
分子名称: 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-02-15
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
To Be Published
8G6Q
DownloadVisualize
BU of 8g6q by Molmil
H2AK119ub-modified nucleosome ubiquitin position 1
分子名称: 601 DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-02-15
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
To Be Published
8G6S
DownloadVisualize
BU of 8g6s by Molmil
H2AK119ub-modified nucleosome ubiquitin position 2
分子名称: 601 DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-02-15
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
To Be Published
6SGR
DownloadVisualize
BU of 6sgr by Molmil
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
分子名称: DARPin, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrB
著者Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
登録日2019-08-05
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
6IS5
DownloadVisualize
BU of 6is5 by Molmil
P domain of GII.3-TV24 with A-tetrasaccharide complex
分子名称: VP1 Capsid protein, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Yang, Y.
登録日2018-11-15
公開日2019-11-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structural basis of host ligand specificity change of GII porcine noroviruses from their closely related GII human noroviruses.
Emerg Microbes Infect, 8, 2019
6SKU
DownloadVisualize
BU of 6sku by Molmil
Legionella effector AnkX in complex with human Rab1b
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphocholine transferase AnkX, ...
著者Ernst, S, Ecker, F, Kaspers, M, Ochtrop, P, Hedberg, C, Groll, M, Itzen, A.
登録日2019-08-16
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Legionellaeffector AnkX displaces the switch II region for Rab1b phosphocholination.
Sci Adv, 6, 2020
6SGU
DownloadVisualize
BU of 6sgu by Molmil
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc
分子名称: DARPin, Multidrug efflux pump subunit AcrB
著者Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
登録日2019-08-05
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
6SIG
DownloadVisualize
BU of 6sig by Molmil
Epidermicin antimicrobial protein from Staphylococcus epidermidis
分子名称: Epidermicin locus structural protein, SULFATE ION
著者Derrick, J.P.
登録日2019-08-09
公開日2020-08-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Flowering Poration-A Synergistic Multi-Mode Antibacterial Mechanism by a Bacteriocin Fold.
Iscience, 23, 2020
6SGT
DownloadVisualize
BU of 6sgt by Molmil
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc with cardiolipin
分子名称: DARPin, Multidrug efflux pump subunit AcrB
著者Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
登録日2019-08-05
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
6SIF
DownloadVisualize
BU of 6sif by Molmil
Epidermicin antimicrobial protein from Staphylococcus epidermidis
分子名称: Epidermicin locus structural protein, SULFATE ION
著者Derrick, J.P.
登録日2019-08-09
公開日2020-08-26
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Flowering Poration-A Synergistic Multi-Mode Antibacterial Mechanism by a Bacteriocin Fold.
Iscience, 23, 2020
6SML
DownloadVisualize
BU of 6sml by Molmil
Structure of the RagAB peptide importer in the 'open-open' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-THR-GLY-GLY-SER-THR-GLY-THR-THR-SER-ALA-GLY, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-22
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
4IGX
DownloadVisualize
BU of 4igx by Molmil
Crystal structure of kirola (Act d 11) - triclinic form
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Kirola, ...
著者Chruszcz, M, Ciardiello, M.A, Giangrieco, I, Osinski, T, Minor, W.
登録日2012-12-18
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins.
Mol.Immunol., 56, 2013
6SBI
DownloadVisualize
BU of 6sbi by Molmil
X-ray structure of murine Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Rupp, B, Naschberger, A, Weiss, A.K.H.
登録日2019-07-21
公開日2020-03-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
4IGY
DownloadVisualize
BU of 4igy by Molmil
Crystal structure of kirola (Act d 11) - triclinic form
分子名称: CHLORIDE ION, Kirola, UNKNOWN LIGAND
著者Chruszcz, M, Ciardiello, M.A, Giangrieco, I, Osinski, T, Minor, W.
登録日2012-12-18
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins.
Mol.Immunol., 56, 2013
6SM3
DownloadVisualize
BU of 6sm3 by Molmil
Structure of the RagAB peptide importer in the 'closed-closed' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-THR-SER, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-21
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6SMQ
DownloadVisualize
BU of 6smq by Molmil
Structure of the RagAB peptide importer in the 'open-closed' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-22
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
4BVC
DownloadVisualize
BU of 4bvc by Molmil
Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.
分子名称: 3-(4-PIPERIDYL)-N-[2-(TRIFLUOROMETHOXY)PHENYL]SULFONYL-PROPANAMIDE, APOLIPOPROTEIN(A), CHLORIDE ION, ...
著者Sandmark, J, Althage, M, Andersson, G.M.K, Antonsson, T, Blaho, S, Bodin, C, Bostrom, J, Chen, Y, Dahlen, A, Eriksson, P.O, Evertsson, E, Fex, T, Fjellstrom, O, Gustafsson, D, Hallberg, C, Hicks, R, Jarkvist, E, Johansson, C, Kalies, I, Kang, D, Svalstedt Karlsson, B, Kartberg, F, Legnehed, A, Lindqvist, A.M, Martinsson, S.A, Moberg, A, Petersson, A.U, Ridderstrom, M, Thelin, A, Tigerstrom, A, Vinblad, J, Xu, B, Knecht, W.
登録日2013-06-25
公開日2014-07-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)
To be Published
8GB1
DownloadVisualize
BU of 8gb1 by Molmil
Crystal structure of SAMHD1 dimer bound to deoxyguanosine linked inhibitor
分子名称: 5'-O-[(R)-(3-{[(1M)-3'-bromo[1,1'-biphenyl]-3-carbonyl]amino}propoxy)(hydroxy)phosphoryl]-2'-deoxyguanosine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION
著者Egleston, M, Dong, L, Howlader, A.H, Bhat, S, Orris, B, Bianchet, M.A, Greenberg, M.M, Stivers, J.T.
登録日2023-02-24
公開日2023-06-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Deoxyguanosine-Linked Bifunctional Inhibitor of SAMHD1 dNTPase Activity and Nucleic Acid Binding.
Acs Chem.Biol., 18, 2023
4IGV
DownloadVisualize
BU of 4igv by Molmil
Crystal structure of kirola (Act d 11)
分子名称: CHLORIDE ION, Kirola, UNKNOWN LIGAND
著者Chruszcz, M, Ciardiello, M.A, Giangrieco, I, Osinski, T, Minor, W.
登録日2012-12-18
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins.
Mol.Immunol., 56, 2013
8GB2
DownloadVisualize
BU of 8gb2 by Molmil
Crystal structure of Apo-SAMHD1
分子名称: Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION
著者Egleston, M, Dong, L, Howlader, A.H, Bhat, S, Orris, B, Bianchet, M.A, Greenberg, M.M, Stivers, J.T.
登録日2023-02-24
公開日2023-06-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Deoxyguanosine-Linked Bifunctional Inhibitor of SAMHD1 dNTPase Activity and Nucleic Acid Binding.
Acs Chem.Biol., 18, 2023
4IHR
DownloadVisualize
BU of 4ihr by Molmil
Crystal structure of recombinant kirola (Act d 11)
分子名称: CHLORIDE ION, Kirola, UNKNOWN LIGAND
著者Osinski, T, Majorek, K.A, Ciardiello, M.A, Chruszcz, M, Minor, W.
登録日2012-12-19
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins.
Mol.Immunol., 56, 2013
6STH
DownloadVisualize
BU of 6sth by Molmil
Highly cationic RSL-R8 in complex with sulfonato-calix[8]arene
分子名称: Fucose-binding lectin protein, GLYCEROL, SULFATE ION, ...
著者Skorek, T, Engilberge, S, Crowley, P.B.
登録日2019-09-10
公開日2020-09-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.726 Å)
主引用文献Highly cationic RSL-R8 in complex with sulfonato-calix[8]arene
To Be Published
6SIH
DownloadVisualize
BU of 6sih by Molmil
Structure of bacterial flagellar capping protein FliD
分子名称: Flagellar hook-associated protein 2
著者Al-Otaibi, N.S, Farrell, D, DiMaio, F, Bergeron, J.R.C.
登録日2019-08-09
公開日2020-05-27
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献The cryo-EM structure of the bacterial flagellum cap complex suggests a molecular mechanism for filament elongation.
Nat Commun, 11, 2020

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon