PDB: 45176 件ウェブページステータス検索Chemie searchBIRD

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3GSJ	A Bulky Rhodium Complex Bound to an Adenosine-Adenosine DNA Mismatch 分子名称: 5'-D(*CP*GP*GP*AP*AP*AP*TP*TP*AP*CP*CP*G)-3', CHLORIDE ION, SODIUM ION, ... 著者 Zeglis, B.M, Pierre, V.C, Kaiser, J.T, Barton, J.K. 登録日 2009-03-27 公開日 2009-05-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A bulky rhodium complex bound to an adenosine-adenosine DNA mismatch: general architecture of the metalloinsertion binding mode Biochemistry, 48, 2009
2YNX	Crystal Structure of Ancestral Thioredoxin Relative to Last Archaea Common Ancestor (LACA) from the Precambrian Period 分子名称: ACETATE ION, LACA THIOREDOXIN, SODIUM ION 著者 Gavira, J.A, Ingles-Prieto, A, Ibarra-Molero, B, Sanchez-Ruiz, J.M. 登録日 2012-10-19 公開日 2013-08-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.749 Å) 主引用文献 Conservation of Protein Structure Over Four Billion Years Structure, 21, 2013
3UCY	Structure of Mg2+ bound N-terminal domain of calmodulin in the presence of Zn2+ 分子名称: CACODYLATE ION, Calmodulin, MAGNESIUM ION, ... 著者 Senguen, F.T, Grabarek, Z. 登録日 2011-10-27 公開日 2012-08-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 X-ray Structures of Magnesium and Manganese Complexes with the N-Terminal Domain of Calmodulin: Insights into the Mechanism and Specificity of Metal Ion Binding to an EF-Hand. Biochemistry, 51, 2012
3GWQ	Crystal structure of a putative d-serine deaminase (bxe_a4060) from burkholderia xenovorans lb400 at 2.00 A resolution 分子名称: D-serine deaminase, GLYCEROL, SODIUM ION 著者 Joint Center for Structural Genomics (JCSG) 登録日 2009-04-01 公開日 2009-04-14 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of D-serine deaminase from Burkholderia xenovorans LB400 (YP_556991.1) from BURKHOLDERIA XENOVORANS LB400 at 2.00 A resolution To be published
3GYY	The ectoine binding protein of the TeaABC TRAP transporter TeaA in the Apo-State 分子名称: Periplasmic substrate binding protein, ZINC ION 著者 Kuhlmann, S.I, Terwisscha Van Scheltinga, A.C, Ziegler, C. 登録日 2009-04-06 公開日 2010-04-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Evidence for an allosteric mechanism of substrate release from membrane-transporter accessory binding proteins Proc.Natl.Acad.Sci.USA, 108, 2011
3H42	Crystal structure of PCSK9 in complex with Fab from LDLR competitive antibody 分子名称: Fab from LDLR competitive antibody: Heavy chain, Fab from LDLR competitive antibody: Light chain, Proprotein convertase subtilisin/kexin type 9, ... 著者 Piper, D.E, Walker, N.P.C, Romanow, W.G, Thibault, S.T, Tsai, M.M, Yang, E. 登録日 2009-04-17 公開日 2009-05-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 From the Cover: A proprotein convertase subtilisin/kexin type 9 neutralizing antibody reduces serum cholesterol in mice and nonhuman primates. Proc.Natl.Acad.Sci.USA, 106, 2009
3H5B	Crystal structure of wild type HIV-1 protease with novel P1'-ligand GRL-02031 分子名称: (3aS,5R,6aR)-hexahydro-2H-cyclopenta[b]furan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-([(4-methoxyphenyl)sulfonyl]{[(2R)-5-oxopyrrolidin-2-yl]methyl}amino)propyl]carbamate, CHLORIDE ION, GLYCEROL, ... 著者 Tie, Y, Wang, Y.F, Weber, I.T. 登録日 2009-04-21 公開日 2009-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 Design of HIV-1 protease inhibitors with pyrrolidinones and oxazolidinones as novel P1'-ligands to enhance backbone-binding interactions with protease: synthesis, biological evaluation, and protein-ligand X-ray studies. J.Med.Chem., 52, 2009
1HXN	1.8 ANGSTROMS CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF RABBIT SERUM HEMOPEXIN 分子名称: CHLORIDE ION, HEMOPEXIN, PHOSPHATE ION, ... 著者 Faber, H.R, Baker, E.N. 登録日 1995-06-01 公開日 1995-10-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 1.8 A crystal structure of the C-terminal domain of rabbit serum haemopexin. Structure, 3, 1995
3HC9	Ferric Horse Heart Myoglobin; H64V mutant 分子名称: Myoglobin, PHOSPHATE ION, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Yi, J, Thomas, L.M, Richter-Addo, G.B. 登録日 2009-05-05 公開日 2009-12-29 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The distal pocket histidine residue in horse heart myoglobin directs the o-binding mode of nitrite to the heme iron. J.Am.Chem.Soc., 131, 2009
2Z12	Structure of the transformed monoclinic lysozyme by controlled dehydration 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 Harata, K, Akiba, T. 登録日 2007-05-07 公開日 2008-03-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals. Acta Crystallogr.,Sect.D, 63, 2007
3DJK	Wild Type HIV-1 Protease with potent Antiviral inhibitor GRL-0255A 分子名称: (5R)-1,3-dioxepan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, Protease, ... 著者 Wang, Y.F, Weber, I.T. 登録日 2008-06-23 公開日 2008-09-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Flexible cyclic ethers/polyethers as novel P2-ligands for HIV-1 protease inhibitors: design, synthesis, biological evaluation, and protein-ligand X-ray studies J.Med.Chem., 51, 2008
3SD7	1.7 Angstrom Resolution Crystal Structure of Putative Phosphatase from Clostridium difficile 分子名称: CHLORIDE ION, GLYCEROL, Putative phosphatase, ... 著者 Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2011-06-08 公開日 2011-06-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 1.7 Angstrom Resolution Crystal Structure of Putative Phosphatase from Clostridium difficile. TO BE PUBLISHED
1MOJ	Crystal structure of an archaeal dps-homologue from Halobacterium salinarum 分子名称: Dps-like ferritin, FE (III) ION, MAGNESIUM ION, ... 著者 Zeth, K, Offermann, S, Essen, L.O, Oesterhelt, D. 登録日 2002-09-09 公開日 2004-04-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Iron-oxo clusters biomineralizing on protein surfaces: Structural analysis of Halobacterium salinarum DpsA in its low- and high-iron states. Proc.Natl.Acad.Sci.USA, 101, 2004
3UWW	Crystal structure of Staphylococcus Aureus triosephosphate isomerase complexed with 3-phosphoglyceric acid 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-PHOSPHOGLYCERIC ACID, SODIUM ION, ... 著者 Mukherjee, S, Roychowdhury, A, Dutta, D, Das, A.K. 登録日 2011-12-03 公開日 2012-10-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal structures of triosephosphate isomerase from methicillin resistant Staphylococcus aureus MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop Biochimie, 94, 2012
3URG	The crystal structure of Anabaena CcbP 分子名称: 5-MERCAPTO-2-NITRO-BENZOIC ACID, Alr1010 protein, SODIUM ION 著者 Fan, X.X, Liu, X, Su, X.D. 登録日 2011-11-22 公開日 2012-11-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.003 Å) 主引用文献 Ellman's reagent in promoting crystallization and structure determination of Anabaena CcbP. Acta Crystallogr.,Sect.F, 68, 2012
3H8J	Native T4 RNase H in the absence of divalent metal ions 分子名称: Ribonuclease H, SODIUM ION, SULFATE ION 著者 Tomanicek, S.J, Mueser, T.C. 登録日 2009-04-29 公開日 2010-05-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Additional Order Appears in the Absence of Metals in a FEN-1 protein: Structural Analysis of Magnesium Binding to Bacteriophage T4 RNaseH To be Published
1CW2	CRYSTAL STRUCTURE OF THE COMPLEX OF BACTERIAL TRYPTOPHAN SYNTHASE WITH THE TRANSITION STATE ANALOGUE INHIBITOR 4-(2-HYDROXYPHENYLSULFINYL)-BUTYLPHOSPHONIC ACID 分子名称: 4-(2-HYDROXYPHENYLSULFINYL)-BUTYLPHOSPHONIC ACID, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ... 著者 Sachpatzidis, A, Dealwis, C, Lubetsky, J.B, Liang, P.H, Anderson, K.S, Lolis, E. 登録日 1999-08-25 公開日 1999-12-21 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic studies of phosphonate-based alpha-reaction transition-state analogues complexed to tryptophan synthase. Biochemistry, 38, 1999
1CKC	T43A MUTANT HUMAN LYSOZYME 分子名称: PROTEIN (LYSOZYME), SODIUM ION 著者 Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. 登録日 1999-04-22 公開日 1999-04-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
1MLZ	Crystal Structure of 7,8-Diaminopelargonic Acid Synthase in complex with the trans-isomer of amiclenomycin. 分子名称: 7,8-diamino-pelargonic acid aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ... 著者 Sandmark, J, Mann, S, Marquet, A, Schneider, G. 登録日 2002-09-02 公開日 2002-12-04 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural basis for the inhibition of the biosynthesis of biotin by the antibiotic amiclenomycin J.Biol.Chem., 277, 2002
3UMB	Crystal Structure of the L-2-Haloacid Dehalogenase RSc1362 分子名称: CHLORIDE ION, MAGNESIUM ION, POTASSIUM ION, ... 著者 Petit, P, Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F. 登録日 2011-11-12 公開日 2012-11-14 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination To be Published
3UMY	Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus 分子名称: 50S ribosomal protein L1, CHLORIDE ION, MAGNESIUM ION, ... 著者 Gabdulkhakov, A.G, Nevskaya, N.A, Nikonov, S.V. 登録日 2011-11-15 公開日 2012-10-31 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus To be Published
1MQ3	Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTP 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ... 著者 Krahn, J.M, Beard, W.A, Miller, H, Grollman, A.P, Wilson, S.H. 登録日 2002-09-13 公開日 2003-01-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of DNA Polymerase beta with the Mutagenic DNA Lesion 8-oxodeoxyguanine Reveals Structural Insights into its Coding Potential Structure, 11, 2003
3UVF	Expanding LAGALIDADG endonuclease scaffold diversity by rapidly surveying evolutionary sequence space 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Intron-encoded DNA endonuclease I-HjeMI, ... 著者 Jacoby, K, Metzger, M, Shen, B, Jarjour, J, Stoddard, B, Scharenberg, A. 登録日 2011-11-29 公開日 2012-02-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Expanding LAGLIDADG endonuclease scaffold diversity by rapidly surveying evolutionary sequence space. Nucleic Acids Res., 40, 2012
1JRZ	Crystal structure of Arg402Tyr mutant flavocytochrome c3 from Shewanella frigidimarina 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, FLAVOCYTOCHROME C, FUMARIC ACID, ... 著者 Mowat, C.G, Moysey, R, Miles, C.S, Leys, D, Doherty, M.K, Taylor, P, Walkinshaw, M.D, Reid, G.A, Chapman, S.K. 登録日 2001-08-15 公開日 2001-11-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Kinetic and crystallographic analysis of the key active site acid/base arginine in a soluble fumarate reductase. Biochemistry, 40, 2001
1JYN	E. COLI (lacZ) BETA-GALACTOSIDASE (E537Q) IN COMPLEX WITH LACTOSE 分子名称: Beta-Galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ... 著者 Juers, D.H, Matthews, B.W. 登録日 2001-09-13 公開日 2001-12-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase Biochemistry, 40, 2001

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