PDB: 37819 件ウェブページステータス検索Chemie searchBIRD

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5LOK	X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with cytidine and cytosine at 1.11 A resolution 分子名称: 1,2-ETHANEDIOL, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, 6-AMINOPYRIMIDIN-2(1H)-ONE, ... 著者 Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Dontsova, M.V, Betzel, C, Mikhailov, A.M. 登録日 2016-08-09 公開日 2017-08-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.109 Å) 主引用文献 X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with cytidine and cytosine at 1.11 A resolution To Be Published
5LZA	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
5M2X	Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033) 分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ... 著者 Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N. 登録日 2016-10-13 公開日 2018-06-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (4.991 Å) 主引用文献 Supramolecular arrangement of the full-length Zika virus NS5. Plos Pathog., 15, 2019
5LZZ	Structure of the mammalian rescue complex with Pelota and Hbs1l (combined) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... 著者 Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. 登録日 2016-10-02 公開日 2016-11-30 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
5M5B	Crystal structure of Zika virus NS5 methyltransferase 分子名称: CHLORIDE ION, GLYCEROL, NS5 methyltransferase, ... 著者 Barral, K, Ortiz Lombardia, M, Coutard, B, Decroly, E, Lichiere, J. 登録日 2016-10-21 公開日 2016-12-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Zika Virus Methyltransferase: Structure and Functions for Drug Design Perspectives. J. Virol., 91, 2017
3KH3	Crystal structure of human Cu/Zn superoxide dismutase recombinantly produced in Leishmania tarantolae; P212121 crystal form containing 12 chains in the asymmetric unit 分子名称: COPPER (II) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ... 著者 Gazdag, E.M, Blankenfeldt, W. 登録日 2009-10-30 公開日 2010-08-11 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Purification and crystallization of human Cu/Zn superoxide dismutase recombinantly produced in the protozoan Leishmania tarentolae. Acta Crystallogr.,Sect.F, 66, 2010
5LHV	X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine and sulfate ion at 1.29 A resolution 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Balaev, V.V, Betzel, C, Mikhailov, A.M. 登録日 2016-07-13 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.288 Å) 主引用文献 X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine and sulfate ion at 1.29 A resolution To Be Published
5LZF	Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
5LG8	Human L-type ferritin iron loaded for 60 minutes 分子名称: CADMIUM ION, FE (III) ION, Ferritin light chain, ... 著者 Pozzi, C, Di Pisa, F, Mangani, S. 登録日 2016-07-06 公開日 2017-02-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Chemistry at the protein-mineral interface in L-ferritin assists the assembly of a functional ( mu (3)-oxo)Tris[( mu (2)-peroxo)] triiron(III) cluster. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8B6H	Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ... 著者 Muhleip, A, Kock Flygaard, R, Amunts, A. 登録日 2022-09-27 公開日 2023-03-29 最終更新日 2023-04-12 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex. Nature, 615, 2023
5M02	Crystal structure of murine P14 TCR / H-2Db with PF, modified gp33 peptide from LCMV 分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ... 著者 Achour, A, Sandalova, T, Sun, R. 登録日 2016-10-03 公開日 2017-12-20 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant To Be Published
5LZY	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... 著者 Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. 登録日 2016-10-02 公開日 2016-11-30 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
5LZD	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
5M2N	Crystal Structure of Elongator subunit Elp2 分子名称: Elongator complex protein 2 著者 Glatt, S, Mueller, C.W. 登録日 2016-10-13 公開日 2016-12-28 最終更新日 2017-09-06 実験手法 X-RAY DIFFRACTION (2.812 Å) 主引用文献 Architecture of the yeast Elongator complex. EMBO Rep., 18, 2017
5LZE	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
5LZC	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
5M2T	X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... 著者 Prokofev, I.I, Lashkov, A.A, Gabdulkhakov, A.G, Betzel, C, Mikhailov, A.M. 登録日 2016-10-13 公開日 2017-11-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.03 Å) 主引用文献 X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution To Be Published
3ELD	Wesselsbron methyltransferase in complex with Sinefungin 分子名称: Methyltransferase, SINEFUNGIN, SULFATE ION 著者 Bollati, M, Milani, M, Mastrangelo, E, Ricagno, S, Bolognesi, M. 登録日 2008-09-22 公開日 2008-11-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus J.Mol.Biol., 385, 2009
4YH8	Structure of yeast U2AF complex 分子名称: Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ZINC ION 著者 Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. 登録日 2015-02-27 公開日 2015-08-12 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A novel 3' splice site recognition by the two zinc fingers in the U2AF small subunit. Genes Dev., 29, 2015
3C58	Crystal structure of a complex between the wild-type lactococcus lactis Fpg (MutM) and a N7-Benzyl-Fapy-dG containing DNA 分子名称: DNA (5'-D(*DCP*DTP*DCP*DTP*DTP*DTP*(SOS)P*DTP*DTP*DTP*DCP*DTP*DCP*DG)-3'), DNA (5'-D(*DGP*DCP*DGP*DAP*DGP*DAP*DAP*DAP*DCP*DAP*DAP*DAP*DGP*DA)-3'), DNA glycosylase, ... 著者 Coste, F, Castaing, B, Carell, T. 登録日 2008-01-31 公開日 2008-12-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Bacterial base excision repair enzyme Fpg recognizes bulky N7-substituted-FapydG lesion via unproductive binding mode Chem.Biol., 15, 2008
5B7Y	Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Co2+ 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, COBALT (II) ION, ... 著者 Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H. 登録日 2016-06-10 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions Appl. Environ. Microbiol., 83, 2017
3ELU	Wesselsbron virus Methyltransferase in complex with AdoMet 分子名称: Methyltransferase, S-ADENOSYLMETHIONINE, SULFATE ION 著者 Bollati, M, Ricagno, S, Milani, M, Mastrangelo, E, Bolognesi, M. 登録日 2008-09-23 公開日 2008-11-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus J.Mol.Biol., 385, 2009
3EMD	Wesselsbron virus Methyltransferase in complex with Sinefungin and 7MeGpppA 分子名称: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, SINEFUNGIN, SULFATE ION, ... 著者 Bollati, M, Milani, M, Ricagno, S, Mastrangelo, E, Bolognesi, M. 登録日 2008-09-24 公開日 2008-11-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus J.Mol.Biol., 385, 2009
2R1R	RIBONUCLEOTIDE REDUCTASE R1 PROTEIN WITH DTTP OCCUPYING THE SPECIFICITY SITE FROM ESCHERICHIA COLI 分子名称: RIBONUCLEOTIDE REDUCTASE R1 PROTEIN, RIBONUCLEOTIDE REDUCTASE R2 PROTEIN, THYMIDINE-5'-TRIPHOSPHATE 著者 Eriksson, M, Eklund, H. 登録日 1997-07-21 公開日 1998-01-28 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Binding of allosteric effectors to ribonucleotide reductase protein R1: reduction of active-site cysteines promotes substrate binding. Structure, 5, 1997
3MJO	Small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes 分子名称: MANGANESE (III) ION, Ribonucleotide reductase subunit R2F 著者 Ogata, H, Stolle, P, Stehr, M, Auling, G, Lubitz, W. 登録日 2010-04-13 公開日 2010-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 A Tyrosyl-Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes. J.Am.Chem.Soc., 132, 2010

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