PDB: 2055 件ウェブページステータス検索Chemie searchBIRD

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4OWL	Crystal Structure of the Vibrio vulnificus Hemolysin/Cytolysin Beta-Trefoil Lectin with N-Acetyl-D-Lactosamine Bound 分子名称: Cytolysin, GLYCEROL, beta-D-galactopyranose, ... 著者 Kaus, K, Olson, R. 登録日 2014-02-02 公開日 2014-05-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Glycan Specificity of the Vibrio vulnificus Hemolysin Lectin Outlines Evolutionary History of Membrane Targeting by a Toxin Family. J.Mol.Biol., 426, 2014
3AKO	Crystal Structure of the Reassembled Venus 分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, SULFATE ION, Venus 著者 Isogai, M, Tada, T. 登録日 2010-07-15 公開日 2011-08-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure and characteristics of reassembled fluorescent protein, a new insight into the reassembly mechanisms Bioorg.Med.Chem.Lett., 21, 2011
3GMT	Crystal structure of adenylate kinase from burkholderia pseudomallei 分子名称: Adenylate kinase, SULFATE ION 著者 Abendroth, J, Staker, B.L, Robinson, H, Buchko, G.W, Hewitt, S.N, Napuli, A.J, Van Voorhis, W, Stacy, R, Myler, P.J, Stewart, L, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-03-15 公開日 2009-06-02 最終更新日 2013-10-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural characterization of Burkholderia pseudomallei adenylate kinase (Adk): profound asymmetry in the crystal structure of the 'open' state. Biochem.Biophys.Res.Commun., 394, 2010
3SG3	Crystal Structure of GCaMP3-D380Y 分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ... 著者 Schreiter, E.R, Akerboom, J, Looger, L.L. 登録日 2011-06-14 公開日 2012-06-20 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Optimization of a GCaMP calcium indicator for neural activity imaging. J.Neurosci., 32, 2012
3URQ	Crystal Structure of PTE mutant H254G/H257W/L303T/M317L/I106C/F132I/L271I/K185R/I274N/A80V/R67H with cyclohexyl methylphosphonate inhibitor 分子名称: COBALT (II) ION, IMIDAZOLE, Parathion hydrolase, ... 著者 Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M. 登録日 2011-11-22 公開日 2012-08-01 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry, 51, 2012
2AK2	ADENYLATE KINASE ISOENZYME-2 分子名称: ADENYLATE KINASE ISOENZYME-2, SULFATE ION 著者 Schlauderer, G.J, Schulz, G.E. 登録日 1995-12-29 公開日 1996-06-10 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of bovine mitochondrial adenylate kinase: comparison with isoenzymes in other compartments. Protein Sci., 5, 1996
8RJ4	E. coli adenylate kinase in complex with two ADP molecules and Mg2+ as a result of enzymatic AP4A hydrolysis 分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, CHLORIDE ION, ... 著者 Tischlik, S, Ronge, P, Wolf-Watz, M, Sauer-Eriksson, A.E. 登録日 2023-12-20 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Magnesium Induced Structural Preorganization in the Active Site of Adenylate Kinase. Sci Adv, 2024
8C7I	Crystal structure of the PS2 assembly factor Psb32 from the cyanobactium Thermosyncechococcus vestitus (formerly elongatus) 分子名称: Green fluorescent protein,Tll0404 protein 著者 Liauw, P, Gasper, R, Nowaczyk, M.M, Hofmann, E. 登録日 2023-01-16 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Cryo-EM analysis of a novel photosystem II assembly intermediate that binds Psb32 To Be Published
5Y03	Galectin-13/Placental Protein 13 variant R53H crystal structure 分子名称: Galactoside-binding soluble lectin 13 著者 Wang, Y, Su, J. 登録日 2017-07-14 公開日 2018-01-31 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Galectin-13, a different prototype galectin, does not bind beta-galacto-sides and forms dimers via intermolecular disulfide bridges between Cys-136 and Cys-138. Sci Rep, 8, 2018
4JLA	Crystal Structure of Adenylate kinase with 2 ADP's in the active site 分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase 著者 Cho, Y.-J, Kern, D. 登録日 2013-03-12 公開日 2014-06-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol., 22, 2015
7A8C	rsGreen0.7-K206A-F145S in the green-off state 分子名称: Green fluorescent protein, TRIETHYLENE GLYCOL 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
1EMB	GREEN FLUORESCENT PROTEIN (GFP) FROM AEQUOREA VICTORIA, GLN 80 REPLACED WITH ARG 分子名称: GREEN FLUORESCENT PROTEIN 著者 Brejc, K, Sixma, T. 登録日 1997-01-08 公開日 1997-06-16 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Structural basis for dual excitation and photoisomerization of the Aequorea victoria green fluorescent protein. Proc.Natl.Acad.Sci.USA, 94, 1997
1UKY	SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE 分子名称: ADENOSINE-5'-DIPHOSPHATE, URIDYLATE KINASE 著者 Mueller-Dieckmann, H.-J, Schulz, G.E. 登録日 1994-07-13 公開日 1995-01-26 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase. J.Mol.Biol., 246, 1995
1F09	CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES 分子名称: GREEN FLUORESCENT PROTEIN, IODIDE ION 著者 Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J. 登録日 2000-05-15 公開日 2000-11-17 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein. J.Mol.Biol., 301, 2000
2PLK	Crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from Vibrio vulnificus 分子名称: (4-{(E)-[(5-AMINOPENTYL)IMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, lysine/ornithine decarboxylase 著者 Lee, J, Goldsmith, E.J, Phillips, M.A. 登録日 2007-04-19 公開日 2007-07-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Phylogenetic diversity and the structural basis of substrate specificity in the beta/alpha-barrel fold basic amino acid decarboxylases. J.Biol.Chem., 282, 2007
5BTT	Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. 分子名称: GLYCEROL, Green fluorescent protein, SULFATE ION 著者 Hartley, A.M, Worthy, H.L, Reddington, S.C, Rizkallah, P.J, Jones, D.D. 登録日 2015-06-03 公開日 2016-07-13 最終更新日 2017-05-10 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle. Chem Sci, 7, 2016
7BZB	Crystal structure of plant sesterterpene synthase AtTPS18 分子名称: MAGNESIUM ION, PYROPHOSPHATE, Terpenoid synthase 18 著者 Li, J.X, Wang, G.D, Zhang, P. 登録日 2020-04-27 公開日 2020-09-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.148 Å) 主引用文献 Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases. Plant Commun., 1, 2020
7A7U	rsGreen1 in the green-on state 分子名称: Green fluorescent protein 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
8DHY	N-terminal fragment of MsbA fused to GFP in complex with copper(II) 分子名称: COPPER (II) ION, Fusion protein of MsbA N-terminal fragment and GFP,Green fluorescent protein 著者 Schrecke, S.R, Zhang, T, Lyu, J, Laganowsky, A. 登録日 2022-06-28 公開日 2022-12-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural basis for lipid and copper regulation of the ABC transporter MsbA. Nat Commun, 13, 2022
3K1K	Green fluorescent protein bound to enhancer nanobody 分子名称: Enhancer, Green Fluorescent Protein 著者 Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U. 登録日 2009-09-28 公開日 2009-12-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Modulation of protein properties in living cells using nanobodies Nat.Struct.Mol.Biol., 17, 2010
2AR7	Crystal structure of human adenylate kinase 4, AK4 分子名称: Adenylate kinase 4 著者 Filippakopoulos, P, Turnbull, A.P, Fedorov, O, Weigelt, J, Bunkoczi, G, Ugochukwu, E, Debreczeni, J, Niesen, F, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Structural Genomics Consortium (SGC) 登録日 2005-08-19 公開日 2005-12-06 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of human adenylate kinase 4, AK4 To be Published
7R4X	Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Pellegrino, S, Dent, K.C, Spikes, T, Warren, A.J. 登録日 2022-02-09 公開日 2023-02-22 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.15 Å) 主引用文献 Cryo-EM reconstruction of the human 40S ribosomal subunit at 2.15 angstrom resolution. Nucleic Acids Res., 51, 2023
1SZR	A Dimer interface mutant of ornithine decarboxylase reveals structure of gem diamine intermediate 分子名称: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-ORNITHINE, Ornithine decarboxylase, ... 著者 Jackson, L.K, Baldwin, J, Goldsmith, E.J, Phillips, M.A. 登録日 2004-04-06 公開日 2004-10-26 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Multiple active site conformations revealed by distant site mutation in ornithine decarboxylase Biochemistry, 43, 2004
4Z4M	Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein 分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION 著者 Rohaim, A, Kawasaki, M, Wakatsuki, S. 登録日 2015-04-02 公開日 2016-04-06 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1. Febs J., 283, 2016
8FFA	Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) 分子名称: Probable dna-binding stress protein 著者 Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M. 登録日 2022-12-08 公開日 2023-03-08 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity. Int J Mol Sci, 24, 2023

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