PDB: 1671 件ウェブページステータス検索Chemie searchBIRD

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5IP9	Structure of RNA Polymerase II-TFIIF complex 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Plaschka, C, Hantsche, M, Dienemann, C, Burzinski, C, Plitzko, J, Cramer, P. 登録日 2016-03-09 公開日 2016-05-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Transcription initiation complex structures elucidate DNA opening. Nature, 533, 2016
3SO1	Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii 分子名称: CALCIUM ION, Clostrillin, SULFATE ION 著者 Srivastava, S.S, Sankaranarayanan, R. 登録日 2011-06-29 公開日 2011-11-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Decoding the molecular design principles underlying Ca(2+) binding to beta gamma-crystallin motifs J.Mol.Biol., 415, 2012
3SO0	Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii 分子名称: CALCIUM ION, Clostrillin 著者 Srivastava, S.S, Sankaranarayanan, R. 登録日 2011-06-29 公開日 2011-11-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Decoding the molecular design principles underlying Ca(2+) binding to beta gamma-crystallin motifs J.Mol.Biol., 415, 2012
6PLN	X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha 分子名称: Transcription factor E 著者 Murakami, K.S, Jun, S.H. 登録日 2019-07-01 公開日 2020-07-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase. Nat Commun, 11, 2020
5IVO	BC2 nanobody 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, BC2-nanobody 著者 Braun, M.B, Stehle, T. 登録日 2016-03-21 公開日 2016-04-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Peptides in headlock - a novel high-affinity and versatile peptide-binding nanobody for proteomics and microscopy. Sci Rep, 6, 2016
6PIS	Mouse two pore domain K+ channel TRAAK (K2P4.1) - Fab complex structure 分子名称: ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, POTASSIUM ION, ... 著者 Brohawn, S.G. 登録日 2019-06-27 公開日 2019-12-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 The mechanosensitive ion channel TRAAK is localized to the mammalian node of Ranvier. Elife, 8, 2019
5IP7	Structure of RNA Polymerase II-Tfg1 peptide complex 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Plaschka, C, Hantsche, M, Dienemann, C, Burzinski, C, Plitzko, J, Cramer, P. 登録日 2016-03-09 公開日 2016-05-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.52 Å) 主引用文献 Transcription initiation complex structures elucidate DNA opening. Nature, 533, 2016
3SNZ	Crystal structure of a mutant W39D of a betagamma-crystallin domain from Clostridium beijerinckii 分子名称: CALCIUM ION, Clostrillin 著者 Srivastava, S.S, Sankaranarayanan, R. 登録日 2011-06-29 公開日 2011-11-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Decoding the molecular design principles underlying Ca(2+) binding to beta gamma-crystallin motifs J.Mol.Biol., 415, 2012
5IVN	BC2 nanobody in complex with the BC2 peptide tag 分子名称: BC2-nanobody, Cadherin derived peptide 著者 Braun, M.B, Stehle, T. 登録日 2016-03-21 公開日 2016-04-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Peptides in headlock - a novel high-affinity and versatile peptide-binding nanobody for proteomics and microscopy. Sci Rep, 6, 2016
3OT0	Crystal structure of a DNA containing the rigid nitroxide spin-labeled nucleotide C-spin 分子名称: Spin-labeled DNA 著者 Edwards, T.E. 登録日 2010-09-10 公開日 2011-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.7004 Å) 主引用文献 Crystal structure of a DNA containing the planar, phenoxazine-derived bi-functional spectroscopic probe C. Nucleic Acids Res., 10, 2011
3U4V	Crystal Structure of the Tetrahymena telomerase processivity factor Teb1 OB-A 分子名称: Telomerase-associated protein 82 著者 Zeng, Z, Huang, J, Yang, Y, Lei, M. 登録日 2011-10-10 公開日 2011-12-28 最終更新日 2012-05-23 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA. Proc.Natl.Acad.Sci.USA, 108, 2011
3U4Z	Crystal Structure of the Tetrahymena telomerase processivity factor Teb1 OB-B 分子名称: Telomerase-associated protein 82 著者 Zeng, Z, Huang, J, Yang, Y, Lei, M. 登録日 2011-10-10 公開日 2011-12-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA. Proc.Natl.Acad.Sci.USA, 108, 2011
3OKG	Crystal structure of HsdS subunit from Thermoanaerobacter tengcongensis 分子名称: Restriction endonuclease S subunits, SULFATE ION 著者 Liang, D, Gao, P, Tang, Q, An, X, Yan, X. 登録日 2010-08-24 公開日 2011-05-25 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure of HsdS subunit from Thermoanaerobacter tengcongensis sheds lights on mechanism of dynamic opening and closing of type I methyltransferase Plos One, 6, 2011
3U50	Crystal Structure of the Tetrahymena telomerase processivity factor Teb1 OB-C 分子名称: Telomerase-associated protein 82, ZINC ION 著者 Zeng, Z, Huang, J, Yang, Y, Lei, M. 登録日 2011-10-10 公開日 2011-12-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA. Proc.Natl.Acad.Sci.USA, 108, 2011
3U58	Crystal Structure of the Tetrahymena telomerase processivity factor Teb1 AB 分子名称: DNA (5'-D(*GP*GP*GP*T)-3'), Tetrahymena Teb1 AB 著者 Zeng, Z, Huang, J, Yang, Y, Lei, M. 登録日 2011-10-11 公開日 2011-12-28 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.613 Å) 主引用文献 Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA. Proc.Natl.Acad.Sci.USA, 108, 2011
4WVE	Crystal structure of the Staphylococcus aureus SasG G52-E2-G53 module 分子名称: CHLORIDE ION, Surface protein G 著者 Whelan, F, Potts, J.R. 登録日 2014-11-05 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein. Nat Commun, 6, 2015
4YHG	NATIVE BACTEROIDETES-AFFILIATED GH5 CELLULASE LINKED WITH A POLYSACCHARIDE UTILIZATION LOCUS 分子名称: GH5, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Naas, A.E, MacKenzie, A.K, Dalhus, B, Eijsink, V.G.H, Pope, P.B. 登録日 2015-02-27 公開日 2015-07-15 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Features of a Bacteroidetes-Affiliated Cellulase Linked with a Polysaccharide Utilization Locus. Sci Rep, 5, 2015
4YVO	Crystal Structure of the TPR Domain of Arabidopsis FLU (FLU-TPR) 分子名称: Protein FLUORESCENT IN BLUE LIGHT, chloroplastic 著者 Zhang, M, Zhang, F, Liu, L. 登録日 2015-03-20 公開日 2015-06-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 The Non-canonical Tetratricopeptide Repeat (TPR) Domain of Fluorescent (FLU) Mediates Complex Formation with Glutamyl-tRNA Reductase. J.Biol.Chem., 290, 2015
4YHR	Crystal Structure of Yeast Proliferating Cell Nuclear Antigen 分子名称: Proliferating cell nuclear antigen 著者 Litman, J.M, Nguyen, V.Q, Kondratick, C.M, Powers, K.T, Schnieders, M.J, Washington, M.T. 登録日 2015-02-27 公開日 2015-03-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.9502 Å) 主引用文献 Dead-End Elimination with a Polarizable Force Field Repacks PCNA Models from Low-Resolution X-ray Diffraction into Atomic Resolution Structures To be published
4YHE	NATIVE BACTEROIDETES-AFFILIATED GH5 CELLULASE LINKED WITH A POLYSACCHARIDE UTILIZATION LOCUS 分子名称: GH5 著者 Naas, A.E, MacKenzie, A.K, Dalhus, B, Eijsink, V.G.H, Pope, P.B. 登録日 2015-02-27 公開日 2015-05-20 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural Features of a Bacteroidetes-Affiliated Cellulase Linked with a Polysaccharide Utilization Locus. Sci Rep, 5, 2015
4YFX	Escherichia coli RNA polymerase in complex with Myxopyronin B 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Molodtsov, V, Fleming, P.R, Eyermann, C.J, Ferguson, A.D, Foulk, M.A, McKinney, D.C, Masse, C.E, Buurman, E.T, Murakami, K.S. 登録日 2015-02-25 公開日 2015-03-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.844 Å) 主引用文献 X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein. J.Med.Chem., 58, 2015
4YFK	Escherichia coli RNA polymerase in complex with squaramide compound 8. 分子名称: 3,5-dimethyl-N-{2-[4-(4-methylbenzyl)piperidin-1-yl]-3,4-dioxocyclobut-1-en-1-yl}-1,2-oxazole-4-sulfonamide, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Molodtsov, V, Fleming, P.R, Eyermann, C.J, Ferguson, A.D, Foulk, M.A, McKinney, D.C, Masse, C.E, Buurman, E.T, Murakami, K.S. 登録日 2015-02-25 公開日 2015-03-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.571 Å) 主引用文献 X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein. J.Med.Chem., 58, 2015
4YFN	Escherichia coli RNA polymerase in complex with squaramide compound 14 (N-[3,4-dioxo-2-(4-{[4-(trifluoromethyl)benzyl]amino}piperidin-1-yl)cyclobut-1-en-1-yl]-3,5-dimethyl-1,2-oxazole-4-sulfonamide) 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Molodtsov, V, Fleming, P.R, Eyermann, C.J, Ferguson, A.D, Foulk, M.A, McKinney, D.C, Masse, C.E, Buurman, E.T, Murakami, K.S. 登録日 2015-02-25 公開日 2015-03-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.817 Å) 主引用文献 X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein. J.Med.Chem., 58, 2015
4YVQ	Crystal Structure of FLU-TPR in Complex with the C-terminal Region of GluTR 分子名称: Glutamyl-tRNA reductase 1, chloroplastic, Protein FLUORESCENT IN BLUE LIGHT 著者 Zhang, M, Zhang, F, Liu, L. 登録日 2015-03-20 公開日 2015-06-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.401 Å) 主引用文献 The Non-canonical Tetratricopeptide Repeat (TPR) Domain of Fluorescent (FLU) Mediates Complex Formation with Glutamyl-tRNA Reductase. J.Biol.Chem., 290, 2015
4YXP	The structure of the folded domain of the signature multifunctional protein ICP27 from herpes simplex virus-1 reveals an intertwined dimer. 分子名称: ZINC ION, mRNA export factor 著者 Tunnicliffe, R.B, Schacht, M, Levy, C.W, Jowitt, T.A, Sandri-Goldin, R.M, Golovanov, A.P. 登録日 2015-03-23 公開日 2015-06-17 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 The structure of the folded domain from the signature multifunctional protein ICP27 from herpes simplex virus-1 reveals an intertwined dimer. Sci Rep, 5, 2015

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