PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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8UJK	In situ HHT and CHX treated A-P-Z state 80S ribosome 分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA, 28S rRNA, ... 著者 Wei, Z, Yong, X. 登録日 2023-10-11 公開日 2025-04-16 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 In situ HHT and CHX treated human A-P-Z state 80S ribosome To Be Published
5FN5	Cryo-EM structure of gamma secretase in class 3 of the apo- state ensemble 分子名称: Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Nicastrin, ... 著者 Bai, X.C, Rajendra, E, Yang, G.H, Shi, Y.G, Scheres, S.H.W. 登録日 2015-11-10 公開日 2015-12-16 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Sampling the conformational space of the catalytic subunit of human gamma-secretase. Elife, 4, 2015
6C23	Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Compact Active State 分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, JARID2-substrate, ... 著者 Kasinath, V, Faini, M, Poepsel, S, Reif, D, Feng, A, Stjepanovic, G, Aebersold, R, Nogales, E. 登録日 2018-01-05 公開日 2018-01-24 最終更新日 2025-04-09 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of human PRC2 with its cofactors AEBP2 and JARID2. Science, 359, 2018
6C24	Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Extended Active State 分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, JARID2-substrate, ... 著者 Kasinath, V, Faini, M, Poepsel, S, Reif, D, Feng, A, Stjepanovic, G, Aebersold, R, Nogales, E. 登録日 2018-01-06 公開日 2018-01-24 最終更新日 2025-04-09 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structures of human PRC2 with its cofactors AEBP2 and JARID2. Science, 359, 2018
5NBN	Crystal structure of the Arp4-N-actin-Arp8-Ino80HSA module of INO80 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin-like protein ARP8, ... 著者 Knoll, K.R, Eustermann, S, Hopfner, K.P. 登録日 2017-03-02 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 The nuclear actin-containing Arp8 module is a linker DNA sensor driving INO80 chromatin remodeling. Nat. Struct. Mol. Biol., 25, 2018
3C3B	Crystal Structure of human phosphoglycerate kinase bound to D-CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, PHOSPHATE ION, Phosphoglycerate kinase 1 著者 Arold, S.T, Gondeau, C, Lionne, C, Chaloin, L. 登録日 2008-01-28 公開日 2008-07-01 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase Nucleic Acids Res., 36, 2008
8ZOX	3D structure of Y-50 TCR-TMM-CD1b ternary complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, T-cell surface glycoprotein CD1b, ... 著者 Asa, M, Hirose, M, Nagae, M, Yamasaki, S, Kato, T. 登録日 2024-05-29 公開日 2025-01-01 最終更新日 2025-03-26 実験手法 ELECTRON MICROSCOPY (3.18 Å) 主引用文献 A conserved human CD4+ T cell subset recognizing the mycobacterial adjuvant, trehalose monomycolate. J.Clin.Invest., 135, 2024
3C3A	Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate and L-ADP 分子名称: 3-PHOSPHOGLYCERIC ACID, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Arold, S.T, Gondeau, C, Lionne, C, Chaloin, L. 登録日 2008-01-28 公開日 2008-07-01 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase Nucleic Acids Res., 36, 2008
5NBL	Crystal structure of the Arp4-N-actin(APO-state) heterodimer bound by a nanobody 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin-related protein 4, ... 著者 Knoll, K.R, Eustermann, S, Hopfner, K.P. 登録日 2017-03-02 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The nuclear actin-containing Arp8 module is a linker DNA sensor driving INO80 chromatin remodeling. Nat. Struct. Mol. Biol., 25, 2018
5FN2	Cryo-EM structure of gamma secretase in complex with a drug DAPT 分子名称: Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Nicastrin, ... 著者 Bai, X.C, Rajendra, E, Yang, G.H, Shi, Y.G, Scheres, S.H.W. 登録日 2015-11-10 公開日 2015-12-16 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Sampling the conformational space of the catalytic subunit of human gamma-secretase. Elife, 4, 2015
5FN3	Cryo-EM structure of gamma secretase in class 1 of the apo- state ensemble 分子名称: Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Nicastrin, ... 著者 Bai, X.C, Rajendra, E, Yang, G.H, Shi, Y.G, Scheres, S.H.W. 登録日 2015-11-10 公開日 2015-12-16 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Sampling the conformational space of the catalytic subunit of human gamma-secretase. Elife, 4, 2015
5FN4	Cryo-EM structure of gamma secretase in class 2 of the apo- state ensemble 分子名称: Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Nicastrin, ... 著者 Bai, X.C, Rajendra, E, Yang, G.H, Shi, Y.G, Scheres, S.H.W. 登録日 2015-11-10 公開日 2015-12-16 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Sampling the conformational space of the catalytic subunit of human gamma-secretase. Elife, 4, 2015
6TED	Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elongation activation by RTF1 分子名称: DNA (37-MER), DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase subunit, ... 著者 Vos, S.M, Farnung, L, Cramer, P. 登録日 2019-11-11 公開日 2020-07-22 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation. Nat.Struct.Mol.Biol., 27, 2020
6T9K	SAGA Core module 分子名称: Protein SPT3, SAGA-associated factor 73, Transcription factor SPT20, ... 著者 Wang, H, Cheung, A, Cramer, P. 登録日 2019-10-28 公開日 2020-01-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of the transcription coactivator SAGA. Nature, 577, 2020
3C39	Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate 分子名称: 3-PHOSPHOGLYCERIC ACID, Phosphoglycerate kinase 1 著者 Arold, S.T, Gondeau, C, Lionne, C, Chaloin, L. 登録日 2008-01-28 公開日 2008-07-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Molecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase Nucleic Acids Res., 36, 2008
3C3C	Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate and L-CDP 分子名称: 3-PHOSPHOGLYCERIC ACID, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Arold, S.T, Gondeau, C, Lionne, C, Chaloin, L. 登録日 2008-01-28 公開日 2008-07-01 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase Nucleic Acids Res., 36, 2008
3S8U	Crystal structure of a 2-azido-adenine-modified RNA 分子名称: Ecoli 23 S rRNA Sarcin Ricin loop 著者 Ennifar, E, Micura, R. 登録日 2011-05-31 公開日 2012-04-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 2'-Azido RNA, a Versatile Tool for Chemical Biology: Synthesis, X-ray Structure, siRNA Applications, Click Labeling. Acs Chem.Biol., 7, 2012
1CG6	STRUCTURE OF HUMAN 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE COMPLEXED WITH 5'-DEOXY-5'-METHYLTHIOADENOSINE AND SULFATE AT 1.7 A RESOLUTION 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, PROTEIN (5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE), SULFATE ION 著者 Appleby, T.C, Erion, M.D, Ealick, S.E. 登録日 1999-03-27 公開日 1999-07-05 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The structure of human 5'-deoxy-5'-methylthioadenosine phosphorylase at 1.7 A resolution provides insights into substrate binding and catalysis. Structure Fold.Des., 7, 1999
8RRO	G12V-TCR complex with HLA-A3 分子名称: Beta-2-microglobulin, G12V-TCR alpha chain, G12V-TCR beta chain, ... 著者 Sim, M.J.W, Sun, P.D. 登録日 2024-01-23 公開日 2024-11-20 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Identification and structural characterization of a mutant KRAS-G12V specific TCR restricted by HLA-A3. Eur.J.Immunol., 54, 2024
3S9N	Complex between transferrin receptor 1 and transferrin with iron in the N-Lobe, room temperature 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CARBONATE ION, ... 著者 Eckenroth, B.E, Steere, A.N, Mason, A.B, Everse, S.J. 登録日 2011-06-01 公開日 2011-08-10 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 How the binding of human transferrin primes the transferrin receptor potentiating iron release at endosomal pH. Proc.Natl.Acad.Sci.USA, 108, 2011
5JIB	Crystal structure of the Thermotoga maritima acetyl esterase (TM0077) complex with a substrate analog 分子名称: Cephalosporin-C deacetylase, [(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]acetic acid 著者 Manoj, N. 登録日 2016-04-22 公開日 2017-03-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Crystal structure of Thermotoga maritima acetyl esterase complex with a substrate analog: Insights into the distinctive substrate specificity in the CE7 carbohydrate esterase family Biochem. Biophys. Res. Commun., 476, 2016
8RE4	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt pre-translocated complex 分子名称: DNA (47-MER), DNA (50-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Gao, F, Zhang, X. 登録日 2023-12-10 公開日 2024-01-17 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8RED	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 8nt complex 分子名称: DNA (46-MER), DNA (51-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Gao, F, Zhang, X. 登録日 2023-12-10 公開日 2024-01-17 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REB	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 6nt complex 分子名称: DNA (43-MER), DNA (52-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Gao, F, Zhang, X. 登録日 2023-12-10 公開日 2024-01-17 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REE	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 9nt complex 分子名称: DNA (45-MER), DNA (49-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Gao, F, Zhang, X. 登録日 2023-12-10 公開日 2024-01-17 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024

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