PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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2RUT	Solution structures of the DNA-binding domain (ZF2) of immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT. J Struct Funct Genomics, 16, 2015
2RUY	Solution structures of the DNA-binding domain (ZF10) of immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT J.Struct.Funct.Genom., 16, 2015
2RV3	Solution structures of the DNA-binding domain (ZF15) of immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT J.Struct.Funct.Genom., 16, 2015
2RUV	Solution structures of the DNA-binding domain (ZF4) of immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT J.Struct.Funct.Genom., 16, 2015
2RV5	Solution structures of the DNA-binding domain (ZF8) of mouse immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT J.Struct.Funct.Genom., 16, 2015
2RUU	Solution structures of the DNA-binding domain (ZF3) of immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT J.Struct.Funct.Genom., 16, 2015
2RUZ	Solution structures of the DNA-binding domain (ZF11) of immune-related zinc-finger protein ZFAT 分子名称: ZINC ION, Zinc finger protein ZFAT 著者 Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S. 登録日 2015-01-26 公開日 2015-04-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT J.Struct.Funct.Genom., 16, 2015
3RLO	Structural Basis of Cytosolic DNA Recognition by Innate Receptors 分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Gamma-interferon-inducible protein 16 著者 Jin, T.C, Xiao, T. 登録日 2011-04-19 公開日 2012-04-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor. Immunity, 36, 2012
1YHA	CRYSTAL STRUCTURES OF Y41H AND Y41F MUTANTS OF GENE V PROTEIN FROM FF PHAGE SUGGEST POSSIBLE PROTEIN-PROTEIN INTERACTIONS IN GVP-SSDNA COMPLEX 分子名称: GENE V PROTEIN 著者 Guan, Y, Zhang, H, Konings, R.N.H, Hilbers, C.W, Terwilliger, T.C, Wang, A.H.-J. 登録日 1994-04-14 公開日 1994-06-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of Y41H and Y41F mutants of gene V protein from Ff phage suggest possible protein-protein interactions in the GVP-ssDNA complex. Biochemistry, 33, 1994
1RSB	X-ray study of the DNA oligomer d(ATATAT) in P65 space group 分子名称: 5'-D(*AP*TP*AP*TP*AP*T)-3' 著者 Abrescia, N.G, Gonzalez, C, Gouyette, C, Subirana, J.A. 登録日 2003-12-09 公開日 2004-05-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 X-ray and NMR studies of the DNA oligomer d(ATATAT): Hoogsteen base pairing in duplex DNA. Biochemistry, 43, 2004
3RLN	Structural Basis of Cytosolic DNA Recognition by Innate Immune Receptors 分子名称: Gamma-interferon-inducible protein 16 著者 Jin, T.C, Xiao, T. 登録日 2011-04-19 公開日 2012-04-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.251 Å) 主引用文献 Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor. Immunity, 36, 2012
3IXN	Crystal structure of d(CCGGTACCGG) as B-DNA duplex 分子名称: COBALT (II) ION, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3') 著者 Venkadesh, S, Mandal, P.K, Gautham, N. 登録日 2009-09-04 公開日 2010-09-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Crystal Structure of inverted repeat sequence d(CCGGTACCGG)as B-DNA duplex To be Published
1RPZ	T4 POLYNUCLEOTIDE KINASE BOUND TO 5'-TGCAC-3' SSDNA 分子名称: 5'-D(*TP*GP*CP*AP*C)-3', ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ... 著者 Eastberg, J.H, Pelletier, J, Stoddard, B.L. 登録日 2003-12-03 公開日 2004-02-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase. Nucleic Acids Res., 32, 2004
1RRC	T4 POLYNUCLEOTIDE KINASE BOUND TO 5'-GTC-3' SSDNA 分子名称: 5'-D(*GP*TP*C)-3', ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ... 著者 Eastberg, J.H, Pelletier, J, Stoddard, B.L. 登録日 2003-12-08 公開日 2004-02-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase. Nucleic Acids Res., 32, 2004
2KH3	NMR Structure of Aflatoxin Formamidopyrimidine alpha-anomer in duplex DNA 分子名称: 5'-D(*CP*TP*AP*TP*(FAG)P*AP*TP*TP*CP*A)-3', 5'-D(*TP*GP*AP*AP*TP*CP*AP*TP*AP*G)-3' 著者 Brown, K.L. 登録日 2009-03-24 公開日 2009-12-15 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA J.Am.Chem.Soc., 131, 2009
1YHB	CRYSTAL STRUCTURES OF Y41H AND Y41F MUTANTS OF GENE V PROTEIN FROM FF PHAGE SUGGEST POSSIBLE PROTEIN-PROTEIN INTERACTIONS IN GVP-SSDNA COMPLEX 分子名称: GENE V PROTEIN 著者 Guan, Y, Zhang, H, Konings, R.N.H, Hilbers, C.W, Terwilliger, T.C, Wang, A.H.-J. 登録日 1994-04-14 公開日 1994-06-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of Y41H and Y41F mutants of gene V protein from Ff phage suggest possible protein-protein interactions in the GVP-ssDNA complex. Biochemistry, 33, 1994
5NZX	Crystal structure of DNA cross-link repair protein 1A in complex with Ceftriaxone (alternative site) 分子名称: Ceftriaxone, DNA cross-link repair 1A protein, NICKEL (II) ION 著者 Newman, J.A, Aitkenhead, H, Kupinska, K, Burgess-Brown, N.A, Talon, R, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O. 登録日 2017-05-15 公開日 2017-06-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Crystal structure of DNA cross-link repair protein 1A in complex with Ceftriaxone (alternative site) To Be Published
2KH4	Aflatoxin Formamidopyrimidine alpha anomer in single strand DNA 分子名称: 5'-D(*CP*TP*(FAG)P*A)-3' 著者 Brown, K.L. 登録日 2009-03-24 公開日 2009-12-15 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA J.Am.Chem.Soc., 131, 2009
3SSF	Crystal structure of RNA:DNA dodecamer corresponding to HIV-1 polypurine tract, at 1.6 A resolution. 分子名称: 5'-D(*CP*CP*TP*TP*TP*TP*CP*TP*TP*TP*TP*A)-3', 5'-R(*UP*AP*AP*AP*AP*GP*AP*AP*AP*AP*GP*G)-3', MAGNESIUM ION 著者 Drozdzal, P, Michalska, K, Kierzek, R, Lomozik, L, Jaskolski, M. 登録日 2011-07-08 公開日 2012-02-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of an RNA/DNA dodecamer corresponding to the HIV-1 polypurine tract at 1.6 Angstrom resolution Acta Crystallogr.,Sect.D, 68, 2012
4BXO	Architecture and DNA recognition elements of the Fanconi anemia FANCM- FAAP24 complex 分子名称: 5'-D(*GP*AP*TP*GP*AP*TP*GP*CP*TP*GP*CP)-3', 5'-D(*TP*CP*AP*GP*CP*AP*TP*CP*AP*TP*CP)-3', CALCIUM ION, ... 著者 Coulthard, R, Deans, A, Swuec, P, Bowles, M, Purkiss, A, Costa, A, West, S, McDonald, N. 登録日 2013-07-15 公開日 2013-08-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Architecture and DNA Recognition Elements of the Fanconi Anemia Fancm-Faap24 Complex. Structure, 21, 2013
2W9M	Structure of family X DNA polymerase from Deinococcus radiodurans 分子名称: MERCURY (II) ION, POLYMERASE X, ZINC ION 著者 Leulliot, N, Cladiere, L, Lecointe, F, Durand, D, Hubscher, U, van Tilbeurgh, H. 登録日 2009-01-27 公開日 2009-02-10 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 The Family X DNA Polymerase from Deinococcus Radioduran Adopts a Non-Standard Extended Conformation. J.Biol.Chem., 284, 2009
3S57	ABH2 cross-linked with undamaged dsDNA-1 containing cofactors 分子名称: 2-OXOGLUTARIC ACID, 5'-D(*CP*TP*GP*TP*CP*AP*TP*CP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*TP*GP*AP*CP*A)-3', ... 著者 Yi, C, Chen, B, Qi, B, Ramirez, B, Zhang, W, Jia, G, Zhang, L, Li, C.Q, Dinner, A.R, Yang, C.-G, He, C. 登録日 2011-05-20 公開日 2012-06-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Duplex interrogation by a direct DNA repair protein in search of base damage Nat.Struct.Mol.Biol., 19, 2012
1UMQ	solution structure and DNA binding of the effector domain from the global regulator PrrA(RegA) from R. sphaeroides: Insights into DNA binding specificity 分子名称: PHOTOSYNTHETIC APPARATUS REGULATORY PROTEIN 著者 Laguri, C, Phillips-Jones, M.K, Williamson, M.P. 登録日 2003-08-28 公開日 2003-11-21 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution Structure and DNA Binding of the Effector Domain from the Global Regulator Prra(Rega) from Rhodobacter Sphaeroides: Insights Into DNA Binding Specificity Nucleic Acids Res., 31, 2003
2D7L	Solution structure of the HMG box domain from human WD repeat and HMG-box DNA binding protein 1 分子名称: WD repeat and HMG-box DNA binding protein 1 著者 Tomizawa, T, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Kamatari, Y.O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-11-24 公開日 2006-05-24 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the HMG box domain from human WD repeat and HMG-box DNA binding protein 1 To be Published
1VJ4	SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C) 分子名称: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3' 著者 Shakked, Z, Rabinovich, D, Kennard, O, Cruse, W.B, Salisbury, S.A, Viswamitra, M.A. 登録日 1989-01-11 公開日 1989-01-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Sequence-dependent conformation of an A-DNA double helix: The crystal structure of the octamer d(G-G-T-A-T-A-C-C) J.Mol.Biol., 166, 1983

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