PDB: 1151 件ウェブページステータス検索Chemie searchBIRD

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6GUT	CRYSTAL STRUCTURE OF NON-TYPEABLE HAEMOPHILUS INFLUENZAE PROTEIN E AND PILA EXPRESSED AS A SINGLE-CHAIN CHIMERIC PROTEIN 分子名称: 23S rRNA pseudouridine synthase D,PilA, ACETATE ION, GLYCEROL, ... 著者 Somers, D. 登録日 2018-06-19 公開日 2019-05-29 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Design and Characterization of Protein E-PilA, a Candidate Fusion Antigen for Nontypeable Haemophilus influenzae Vaccine. Infect.Immun., 87, 2019
3DSG	XC1028 from Xanthomonas campestris Adopts a PilZ Domain-like Structure Yet with Trivial c-di-GMP Binding Activity 分子名称: Type IV fimbriae assembly protein 著者 Li, T.N, Chin, K.H, Liu, J.H, Wang, A.H.J, Chou, S.H. 登録日 2008-07-12 公開日 2009-05-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 XC1028 from Xanthomonas campestris adopts a PilZ domain-like structure without a c-di-GMP switch. Proteins, 75, 2009
8HWZ	Cryo-EM structure of delta N15 MsDps2 of Mycobacterium smegmatis 分子名称: Starvation-inducible DNA-binding protein or fine tangled pili major subunit 著者 Garg, P, Dutta, S. 登録日 2023-01-03 公開日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.56 Å) 主引用文献 Cryo-EM structure of delta N15 MsDps2 of Mycobacterium smegmatis To Be Published
5VLZ	Backbone model for phage Qbeta capsid 分子名称: Capsid protein, Maturation protein A2 著者 Cui, Z, Zhang, J. 登録日 2017-04-26 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structures of Q beta virions, virus-like particles, and the Q beta-MurA complex reveal internal coat proteins and the mechanism of host lysis. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5VM7	Pseudo-atomic model of the MurA-A2 complex 分子名称: Maturation protein A2, UDP-N-acetylglucosamine 1-carboxyvinyltransferase 著者 Cui, Z, Zhang, J. 登録日 2017-04-26 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (5.7 Å) 主引用文献 Structures of Q beta virions, virus-like particles, and the Q beta-MurA complex reveal internal coat proteins and the mechanism of host lysis. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7LHD	The complete model of phage Qbeta virion 分子名称: Capsid protein, Genomic RNA, Maturation protein A2 著者 Chang, J.Y, Zhang, J. 登録日 2021-01-22 公開日 2022-01-26 最終更新日 2022-03-09 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural Assembly of Q beta Virion and Its Diverse Forms of Virus-like Particles. Viruses, 14, 2022
5F3F	Crystal structure of para-biphenyl-2-methyl-3'-methyl amide mannoside bound to FimH lectin domain 分子名称: 3-[4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3-methyl-phenyl]-~{N}-methyl-benzamide, Protein FimH 著者 Klein, R.D, Hultgren, S.J. 登録日 2015-12-02 公開日 2016-12-07 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Antivirulence C-Mannosides as Antibiotic-Sparing, Oral Therapeutics for Urinary Tract Infections. J.Med.Chem., 59, 2016
2Z90	Crystal Structure of the Second Dps from Mycobacterium smegmatis 分子名称: CHLORIDE ION, FE (II) ION, MAGNESIUM ION, ... 著者 Roy, S, Saraswathi, R, Chatterji, D, Vijayan, M. 登録日 2007-09-13 公開日 2008-04-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural studies on the second Mycobacterium smegmatis Dps: invariant and variable features of structure, assembly and function. J.Mol.Biol., 375, 2008
4Z3H	Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with 4-methoxyphenyl beta-D-galabiose in space group P21 分子名称: 4-methoxyphenol, PapG, lectin domain, ... 著者 Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B. 登録日 2015-03-31 公開日 2016-04-13 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem, 18, 2017
4Z3F	Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with SSEA4 in space group P21 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, PapG, lectin domain, ... 著者 Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B. 登録日 2015-03-31 公開日 2016-04-13 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem, 18, 2017
4Z3J	Crystal structure of the lectin domain of PapG from E. coli BI47 in space group P1 分子名称: PapG, lectin domain 著者 Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B. 登録日 2015-03-31 公開日 2016-04-13 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem, 18, 2017
4Z3I	Crystal structure of the lectin domain of PapG from E. coli BI47 in spacegroup P21212 分子名称: PapG, lectin domain 著者 Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B. 登録日 2015-03-31 公開日 2016-04-13 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.739 Å) 主引用文献 Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem, 18, 2017
4Z3G	Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with 4-methoxyphenyl beta-D-galabiose in space group P212121 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-methoxyphenol, PapG, ... 著者 Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B. 登録日 2015-03-31 公開日 2016-04-13 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem, 18, 2017
4Z3E	Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with SSEA4 in space group P212121 分子名称: PapG, lectin domain, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Jakob, R.P, Navarra, G, Zihlmann, P, Stangier, K, Preston, R.C, Rabbani, S, Maier, T, Ernst, B. 登録日 2015-03-31 公開日 2016-04-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem, 18, 2017
5JR4	Crystal structure of FimH A27V/V163A from E. coli UTI89 bound to FimG N-terminal extension 分子名称: CALCIUM ION, FimG N-terminal extension, GLYCEROL, ... 著者 Kalas, V, Hultgren, S.J. 登録日 2016-05-05 公開日 2017-02-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.596 Å) 主引用文献 Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions. Sci Adv, 3, 2017
5JQI	Crystal structure of FimH A62S from E. coli UTI89 bound to FimG N-terminal extension 分子名称: FimG N-terminal extension, GLYCEROL, Type 1 fimbiral adhesin FimH 著者 Kalas, V, Hultgren, S.J. 登録日 2016-05-05 公開日 2017-02-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.962 Å) 主引用文献 Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions. Sci Adv, 3, 2017
5FL3	PilT2 from Thermus thermophilus 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ... 著者 Karuppiah, V, Derrick, J.P. 登録日 2015-10-21 公開日 2015-11-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Pilt2 from Thermus Thermophilus To be Published
4BP7	Asymmetric structure of a virus-receptor complex 分子名称: COAT PROTEIN 著者 Dent, K.C, Thompson, R, Barker, A.M, Barr, J.N, Hiscox, J.A, Stockley, P.G, Ranson, N.A. 登録日 2013-05-23 公開日 2013-07-17 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (39 Å) 主引用文献 The Asymmetric Structure of an Icosahedral Virus Bound its Receptor Suggests a Mechanism for Genome Release. Structure, 21, 2013
3VAC	Crystal Structure of the CFA/I Enterotoxigenic E. coli adhesin CfaE mutant G168D 分子名称: CFA/I fimbrial subunit E 著者 Liu, Y, Esser, L, Xia, D. 登録日 2011-12-29 公開日 2013-02-20 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Tight Conformational Coupling between the Domains of the Enterotoxigenic Escherichia coli Fimbrial Adhesin CfaE Regulates Binding State Transition. J.Biol.Chem., 288, 2013
3GF8	Crystal structure of putative polysaccharide binding proteins (DUF1812) (NP_809975.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.20 A resolution 分子名称: 1,2-ETHANEDIOL, putative polysaccharide binding proteins (DUF1812) 著者 Joint Center for Structural Genomics (JCSG) 登録日 2009-02-26 公開日 2009-03-24 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 A resolution Acta Crystallogr.,Sect.F, 66, 2010
6UTU	Crystal structure of minor pseudopilin ternary complex of XcpVWX from the Type 2 secretion system of Pseudomonas aeruginosa in the P3 space group 分子名称: CALCIUM ION, Type II secretion system protein I, Type II secretion system protein J, ... 著者 Zhang, Y, Wang, S, Jia, Z. 登録日 2019-10-30 公開日 2020-09-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 In Situ Proteolysis Condition-Induced Crystallization of the XcpVWX Complex in Different Lattices. Int J Mol Sci, 21, 2020
3QDH	Crystal structure of Actinomyces fimbrial adhesin FimA 分子名称: Fimbrial structural subunit, ZINC ION 著者 Devarajan, B, Krishnan, V, Narayana, S.V.L. 登録日 2011-01-18 公開日 2011-08-24 最終更新日 2011-09-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Two autonomous structural modules in the fimbrial shaft adhesin FimA mediate Actinomyces interactions with streptococci and host cells during oral biofilm development. Mol.Microbiol., 81, 2011
1QHD	CRYSTAL STRUCTURE OF VP6, THE MAJOR CAPSID PROTEIN OF GROUP A ROTAVIRUS 分子名称: CALCIUM ION, CHLORIDE ION, VIRAL CAPSID VP6, ... 著者 Mathieu, M, Petitpas, I, Rey, F.A. 登録日 1999-04-29 公開日 2001-04-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Atomic structure of the major capsid protein of rotavirus: implications for the architecture of the virion. EMBO J., 20, 2001
8CO1	Type II Secretion System 分子名称: IPT/TIG domain-containing protein, Lipoprotein, Probable type IV piliation system protein DR_0774 著者 Farci, D, Piano, D. 登録日 2023-02-26 公開日 2024-04-10 実験手法 ELECTRON MICROSCOPY (2.56 Å) 主引用文献 Structural characterization and functional insights into the type II secretion system of the poly-extremophile Deinococcus radiodurans. J.Biol.Chem., 300, 2024
5E73	Crystal Structure of BAZ2B bromodomain in complex with acetylindole compound UZH47 分子名称: Bromodomain adjacent to zinc finger domain protein 2B, N-(1-acetyl-1H-indol-3-yl)-N-(5-hydroxy-2-methylphenyl)acetamide 著者 Lolli, G, Spiliotopoulos, D, Unzue, A, Nevado, C, Caflisch, A. 登録日 2015-10-11 公開日 2015-10-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 The "Gatekeeper" Residue Influences the Mode of Binding of Acetyl Indoles to Bromodomains. J. Med. Chem., 59, 2016

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