Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3EON
DownloadVisualize
BU of 3eon by Molmil
2.55A crystal structure of native glutaryl-coa dehydrogenase from Burkholderia pseudomallei in complex with a small molecule
分子名称: (3,5-difluorophenyl)methanol, Glutaryl-CoA dehydrogenase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2008-09-28
公開日2008-10-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Probing conformational states of glutaryl-CoA dehydrogenase by fragment screening.
Acta Crystallogr.,Sect.F, 67, 2011
4H8I
DownloadVisualize
BU of 4h8i by Molmil
Structure of GluK2-LBD in complex with GluAzo
分子名称: (4R)-4-[(2E)-3-{4-[(E)-phenyldiazenyl]phenyl}prop-2-en-1-yl]-L-glutamic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Reiter, A, Skerra, A, Trauner, D, Schiefner, A.
登録日2012-09-22
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A photoswitchable neurotransmitter analogue bound to its receptor.
Biochemistry, 52, 2013
3E6H
DownloadVisualize
BU of 3e6h by Molmil
MHC CLASS I H-2Dd heavy chain complexed with Beta-2 Microglobulin and a variant peptide, PI10, from the human immunodeficiency virus (BaL) envelope glycoprotein 120
分子名称: Envelope glycoprotein 10-residue peptide, H-2 class I histocompatibility antigen, D-D alpha chain, ...
著者Wang, R, Natarajan, K, Robinson, H, Margulies, D.H.
登録日2008-08-15
公開日2009-08-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Different vaccine vectors delivering the same antigen elicit CD8+ T cell responses with distinct clonotype and epitope specificity
J.Immunol., 183, 2009
4H94
DownloadVisualize
BU of 4h94 by Molmil
Radiation damage in lysozyme - 0.56 MGy
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C
著者Sutton, K.A, Snell, E.H.
登録日2012-09-24
公開日2013-05-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Insights into the mechanism of X-ray-induced disulfide-bond cleavage in lysozyme crystals based on EPR, optical absorption and X-ray diffraction studies.
Acta Crystallogr.,Sect.D, 69, 2013
3PVQ
DownloadVisualize
BU of 3pvq by Molmil
Crystal structure of a putative dipeptidyl-peptidase VI (BT_1314) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution
分子名称: CHLORIDE ION, Dipeptidyl-peptidase VI, GLYCEROL
著者Joint Center for Structural Genomics (JCSG)
登録日2010-12-07
公開日2011-02-02
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a putative dipeptidyl-peptidase VI (BT_1314) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution
To be published
4H97
DownloadVisualize
BU of 4h97 by Molmil
Candida albicans dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5-(4-methylphenyl)phenyl]but-1-yn-1-yl}-6-methylpyrimidine-2,4-diamine (UCP111D4M)
分子名称: 5-[(3R)-3-(5-methoxy-4'-methylbiphenyl-3-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine, Dihydrofolate Reductase, GLYCEROL, ...
著者Paulsen, J.L, Anderson, A.C.
登録日2012-09-24
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of the active sites of dihydrofolate reductase from two species of Candida uncovers ligand-induced conformational changes shared among species.
Bioorg.Med.Chem.Lett., 23, 2013
3QSF
DownloadVisualize
BU of 3qsf by Molmil
The first crystal structure of a human telomeric G-quadruplex DNA bound to a metal-containing ligand (a nickel complex)
分子名称: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*T)-3', POTASSIUM ION, [2,2'-{(4,5-difluorobenzene-1,2-diyl)bis[(nitrilo-kappaN)methylylidene]}bis{5-[2-(piperidin-1-yl)ethoxy]phenolato-kappa O}(2-)]nickel (II)
著者Campbell, N.H, Abd Karim, N.H, Parkinson, G.N, Vilar, R, Neidle, S.
登録日2011-02-21
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis of structure-activity relationships between salphen metal complexes and human telomeric DNA quadruplexes.
J.Med.Chem., 55, 2012
4HAB
DownloadVisualize
BU of 4hab by Molmil
Crystal structure of Plk1 Polo-box domain in complex with PL-49
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, PHOSPHATE ION, PL-49, ...
著者Lee, W.C, Song, J.H, Kim, H.Y.
登録日2012-09-26
公開日2013-04-03
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Development of cyclic peptomer inhibitors targeting the polo-box domain of polo-like kinase 1.
Bioorg.Med.Chem., 21, 2013
3E9E
DownloadVisualize
BU of 3e9e by Molmil
Structure of full-length H11A mutant form of TIGAR from Danio rerio
分子名称: PHOSPHATE ION, Zgc:56074
著者Li, H, Jogl, G.
登録日2008-08-21
公開日2008-12-16
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献TIGAR (TP53 induced glycolysis and apoptosis regulator) is a fructose-2,6- and fructose-1,6-bisphosphatase
To be Published
3E9V
DownloadVisualize
BU of 3e9v by Molmil
Crystal structure of human B-cell Translocation Gene 2 (BTG2)
分子名称: 1,2-ETHANEDIOL, Protein BTG2
著者Sampathkumar, P, Romero, R, Wasserman, S, Hu, S, Maletic, M, Freeman, J, Tarun, G, Atwell, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-08-23
公開日2008-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of human B-cell Translocation Gene 2 (BTG2)
To be Published
3EA1
DownloadVisualize
BU of 3ea1 by Molmil
Crystal Structure of the Y247S/Y251S Mutant of Phosphatidylinositol-Specific Phospholipase C from Bacillus Thuringiensis
分子名称: 1-phosphatidylinositol phosphodiesterase, ZINC ION
著者Shi, X, Shao, C, Zhang, X, Zambonelli, C, Redfied, A.G, Head, J.F, Seaton, B.A, Roberts, M.F.
登録日2008-08-24
公開日2009-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Modulation of bacillus thuringiensis phosphatidylinositol-specific phospholipase C activity by mutations in the putative dimerization interface.
J.Biol.Chem., 284, 2009
4HAR
DownloadVisualize
BU of 4har by Molmil
Crystal Structure of Rubella virus capsid protein (residues 127-277)
分子名称: CHLORIDE ION, Capsid protein, LAURYL DIMETHYLAMINE-N-OXIDE
著者Mangala Prasad, V, Fokine, A, Rossmann, M.G.
登録日2012-09-27
公開日2013-12-11
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.663 Å)
主引用文献Rubella virus capsid protein structure and its role in virus assembly and infection.
Proc.Natl.Acad.Sci.USA, 110, 2013
3QWN
DownloadVisualize
BU of 3qwn by Molmil
Crystal structure of a NigD-like immunity protein (BACCAC_03262) from Bacteroides caccae ATCC 43185 at 2.42 A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Hypothetical nigD-like protein
著者Joint Center for Structural Genomics (JCSG)
登録日2011-02-28
公開日2011-03-23
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structure of a Hypothetical nigD-like protein (BACCAC_03262) from Bacteroides caccae at 2.42 A resolution
To be published
4HBE
DownloadVisualize
BU of 4hbe by Molmil
Crystal Structure of Rubella virus capsid protein (residues 127-277)
分子名称: Capsid protein
著者Mangala Prasad, V, Fokine, A, Rossmann, M.G.
登録日2012-09-27
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rubella virus capsid protein structure and its role in virus assembly and infection.
Proc.Natl.Acad.Sci.USA, 110, 2013
3QVA
DownloadVisualize
BU of 3qva by Molmil
Structure of Klebsiella pneumoniae 5-hydroxyisourate hydrolase
分子名称: PHOSPHATE ION, Transthyretin-like protein
著者French, J.B, Ealick, S.E.
登録日2011-02-25
公開日2011-08-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献Structural and kinetic insights into the mechanism of 5-hydroxyisourate hydrolase from Klebsiella pneumoniae.
Acta Crystallogr.,Sect.D, 67, 2011
3EL4
DownloadVisualize
BU of 3el4 by Molmil
Crystal structure of inhibitor saquinavir (SQV) complexed with the multidrug HIV-1 protease variant L63P/V82T/I84V
分子名称: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETATE ION, Protease
著者Prabu-Jeyabalan, M, King, N, Schiffer, C.
登録日2008-09-19
公開日2009-09-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Extreme Entropy-Enthalpy Compensation in a Drug-Resistant Variant of HIV-1 Protease.
Acs Chem.Biol., 7, 2012
3QRP
DownloadVisualize
BU of 3qrp by Molmil
Structure of Thermus Thermophilus Cse3 bound to an RNA representing a product mimic complex
分子名称: Putative uncharacterized protein TTHB192, RNA (5'-R(*GP*UP*CP*CP*CP*CP*AP*CP*(PGP))-3'), RNA (5'-R(P*(U5P)P*GP*UP*GP*GP*GP*G)-3'), ...
著者Schellenberg, M.J, Gesner, E.M, Garside, E.L, MacMillan, A.M.
登録日2011-02-18
公開日2011-05-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.352 Å)
主引用文献Recognition and maturation of effector RNAs in a CRISPR interference pathway.
Nat.Struct.Mol.Biol., 18, 2011
3EOO
DownloadVisualize
BU of 3eoo by Molmil
2.9A crystal structure of methyl-isocitrate lyase from Burkholderia pseudomallei
分子名称: Methylisocitrate lyase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2008-09-28
公開日2008-10-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of isocitrate lyase from Brucella melitensis
To be Published
3QTC
DownloadVisualize
BU of 3qtc by Molmil
Crystal structure of the catalytic domain of MmOmeRS, an O-methyl tyrosyl-tRNA synthetase evolved from Methanosarcina mazei PylRS, complexed with O-methyl tyrosine and AMP-PNP
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, O-methyl-L-tyrosine, ...
著者Dellas, N, Takimoto, J.K, Noel, J.P, Wang, L.
登録日2011-02-22
公開日2011-05-25
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Stereochemical Basis for Engineered Pyrrolysyl-tRNA Synthetase and the Efficient in Vivo Incorporation of Structurally Divergent Non-native Amino Acids.
Acs Chem.Biol., 6, 2011
3EN4
DownloadVisualize
BU of 3en4 by Molmil
Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP121, a multitargeted kinase inhibitor
分子名称: 1-cyclopentyl-3-(1H-pyrrolo[2,3-b]pyridin-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Proto-oncogene tyrosine-protein kinase Src
著者Blair, J.A, Apsel, B, Knight, Z.A, Shokat, K.M.
登録日2008-09-25
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases.
Nat.Chem.Biol., 4, 2008
3QUA
DownloadVisualize
BU of 3qua by Molmil
Crystal structure of a putative uncharacterized protein and possible Molybdenum cofactor protein from Mycobacterium smegmatis
分子名称: Putative uncharacterized protein, UNKNOWN LIGAND
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-02-23
公開日2011-03-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4HFQ
DownloadVisualize
BU of 4hfq by Molmil
Crystal structure of UDP-X diphosphatase
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者Duong-Ly, K.C, Amzel, L.M, Gabelli, S.B.
登録日2012-10-05
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献A UDP-X diphosphatase from Streptococcus pneumoniae hydrolyzes precursors of peptidoglycan biosynthesis.
Plos One, 8, 2013
3QVJ
DownloadVisualize
BU of 3qvj by Molmil
Allantoin racemase from Klebsiella pneumoniae
分子名称: CHLORIDE ION, Putative hydantoin racemase
著者French, J.B, Neau, D.B, Ealick, S.E.
登録日2011-02-25
公開日2011-05-04
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Characterization of the Structure and Function of Klebsiella pneumoniae Allantoin Racemase.
J.Mol.Biol., 410, 2011
3EVQ
DownloadVisualize
BU of 3evq by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25E at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Robinson, A.C, Schlessman, J.L, Garcia-Moreno, E.B.
登録日2008-10-13
公開日2008-11-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of D+PHS L25E at cryogenic temperature
To be Published
4D89
DownloadVisualize
BU of 4d89 by Molmil
Crystal Structure of Human Beta Secretase in Complex with NVP-BXD552, derived from a soaking experiment
分子名称: (3S,4S,5R)-3-(4-amino-3-{[(2R)-3-ethoxy-1,1,1-trifluoropropan-2-yl]oxy}-5-fluorobenzyl)-5-[(3-tert-butylbenzyl)amino]tetrahydro-2H-thiopyran-4-ol 1,1-dioxide, Beta-secretase 1
著者Rondeau, J.M, Bourgier, E.
登録日2012-01-10
公開日2012-11-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides
J.Med.Chem., 55, 2012

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon