PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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6ZDT	Crystal structure of eukaryotic Fibrillarin with Nop56 N-terminal domain 分子名称: Nucleolar protein 56, rRNA 2'-O-methyltransferase fibrillarin 著者 Hoefler, S, Lukat, P, Carlomagno, T, Blankenfeldt, W. 登録日 2020-06-15 公開日 2021-02-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 High-resolution structure of eukaryotic Fibrillarin interacting with Nop56 amino-terminal domain. Rna, 27, 2021
4UJE	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement 分子名称: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S RIBOSOMAL PROTEIN S10, ... 著者 Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T. 登録日 2014-04-05 公開日 2014-07-16 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (6.9 Å) 主引用文献 Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement. Cell(Cambridge,Mass.), 158, 2014
5DGE	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M. 登録日 2015-08-27 公開日 2017-01-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome To Be Published
5ISK	Endothiapepsin in complex with fluorinated primary amine fragment 分子名称: 2-amino-1-(4-fluorophenyl)ethan-1-one, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Radeva, N, Heine, A, Klebe, G. 登録日 2016-03-15 公開日 2017-03-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Crystallographic Fragment Screening of an Entire Library to be published
5IS4	Endothiapepsin in complex with chiral brominated primary amine fragment 分子名称: (1S)-2-amino-1-(4-bromophenyl)ethan-1-ol, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Radeva, N, Heine, A, Klebe, G. 登録日 2016-03-15 公開日 2017-03-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.368 Å) 主引用文献 Crystallographic Fragment Screening of an Entire Library to be published
5ISJ	Endothiapepsin in complex with chiral chlorinated primary amine fragment 分子名称: (1S)-2-amino-1-(4-chlorophenyl)ethan-1-ol, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Radeva, N, Heine, A, Klebe, G. 登録日 2016-03-15 公開日 2017-03-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.651 Å) 主引用文献 Crystallographic Fragment Screening of an Entire Library to be published
6GZ3	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... 著者 Flis, J, Holm, M, Rundlet, E.J, Loerke, J, Hilal, T, Dabrowski, M, Buerger, J, Mielke, T, Blanchard, S.C, Spahn, C.M.T, Budkevich, T.V. 登録日 2018-07-03 公開日 2018-12-05 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis. Cell Rep, 25, 2018
4V7H	Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution 分子名称: 18S rRNA, 26S ribosomal RNA, 40S ribosomal protein S0(A), ... 著者 Taylor, D.J, Devkota, B, Huang, A.D, Topf, M, Narayanan, E, Sali, A, Harvey, S.C, Frank, J. 登録日 2009-09-22 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Comprehensive molecular structure of the eukaryotic ribosome. Structure, 17, 2009
6CTS	PROPOSED MECHANISM FOR THE CONDENSATION REACTION OF CITRATE SYNTHASE. 1.9-ANGSTROMS STRUCTURE OF THE TERNARY COMPLEX WITH OXALOACETATE AND CARBOXYMETHYL COENZYME A 分子名称: CITRATE SYNTHASE, CITRYL-THIOETHER-COENZYME *A 著者 Karpusas, M, Branchaud, B, Remington, S.J. 登録日 1989-11-16 公開日 1990-10-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Proposed mechanism for the condensation reaction of citrate synthase: 1.9-A structure of the ternary complex with oxaloacetate and carboxymethyl coenzyme A. Biochemistry, 29, 1990
2HRK	Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes 分子名称: CHLORIDE ION, GU4 nucleic-binding protein 1, Glutamyl-tRNA synthetase, ... 著者 Simader, H, Suck, D. 登録日 2006-07-20 公開日 2006-09-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes. Nucleic Acids Res., 34, 2006
2HSN	Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes 分子名称: GU4 nucleic-binding protein 1, Methionyl-tRNA synthetase, cytoplasmic 著者 Simader, H, Koehler, C, Basquin, J, Suck, D. 登録日 2006-07-22 公開日 2006-09-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes. Nucleic Acids Res., 34, 2006
2HSM	Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes 分子名称: GU4 nucleic-binding protein 1, Glutamyl-tRNA synthetase, cytoplasmic 著者 Simader, H, Suck, D. 登録日 2006-07-22 公開日 2006-09-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes. Nucleic Acids Res., 34, 2006
3D2G	Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch 分子名称: MAGNESIUM ION, THIAMINE DIPHOSPHATE, TPP-specific riboswitch 著者 Thore, S. 登録日 2008-05-08 公開日 2008-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch J.Am.Chem.Soc., 130, 2008
1GNI	HUMAN SERUM ALBUMIN COMPLEXED WITH cis-9-OCTADECENOIC ACID (OLEIC ACID) 分子名称: OLEIC ACID, SERUM ALBUMIN 著者 Petitpas, I, Gruene, T, Bhattacharya, A.A, Curry, S. 登録日 2001-10-05 公開日 2002-01-01 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structures of Human Serum Albumin Complexed with Monounsaturated and Polyunsaturated Fatty Acids. J.Mol.Biol., 314, 2001
1H8U	Crystal Structure of the Eosinophil Major Basic Protein at 1.8A: An Atypical Lectin with a Paradigm Shift in Specificity 分子名称: EOSINOPHIL GRANULE MAJOR BASIC PROTEIN 1, GLYCEROL, SULFATE ION 著者 Swaminathan, G.J, Weaver, A.J, Loegering, D.A, Checkel, J.L, Leonidas, D.D, Gleich, G.J, Acharya, K.R. 登録日 2001-02-15 公開日 2001-07-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of the Eosinophil Major Basic Protein at 1.8A. An Atypical Lectin with a Paradigm Shift in Specificity J.Biol.Chem., 276, 2001
6GZ5	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Flis, J, Holm, M, Rundlet, E.J, Loerke, J, Hilal, T, Dabrowski, M, Buerger, J, Mielke, T, Blanchard, S.C, Spahn, C.M.T, Budkevich, T.V. 登録日 2018-07-03 公開日 2018-12-05 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis. Cell Rep, 25, 2018
6GZ4	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Flis, J, Holm, M, Rundlet, E.J, Loerke, J, Hilal, T, Dabrowski, M, Buerger, J, Mielke, T, Blanchard, S.C, Spahn, C.M.T, Budkevich, T.V. 登録日 2018-07-03 公開日 2018-12-05 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis. Cell Rep, 25, 2018
6DFR	CRYSTAL STRUCTURES OF ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE. THE NADP+ HOLOENZYME AND THE FOLATE(DOT)NADP+ TERNARY COMPLEX. SUBSTRATE BINDING AND A MODEL FOR THE TRANSITION STATE 分子名称: CALCIUM ION, DIHYDROFOLATE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Bystroff, C, Oatley, S.J, Kraut, J. 登録日 1988-10-21 公開日 1990-07-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of Escherichia coli dihydrofolate reductase: the NADP+ holoenzyme and the folate.NADP+ ternary complex. Substrate binding and a model for the transition state. Biochemistry, 29, 1990
2J3J	Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Ternary Complex I 分子名称: 4'-HYDROXYCINNAMIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-dependent oxidoreductase 2-alkenal reductase 著者 Youn, B, Kim, S.J, Moinuddin, S.G, Lee, C, Bedgar, D.L, Harper, A.R, Davin, L.B, Lewis, N.G, Kang, C. 登録日 2006-08-21 公開日 2006-10-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Mechanistic and structural studies of apoform, binary, and ternary complexes of the Arabidopsis alkenal double bond reductase At5g16970. J. Biol. Chem., 281, 2006
2J3I	Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Binary Complex 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-DEPENDENT OXIDOREDUCTASE P1 著者 Youn, B, Kim, S.J, Moinuddin, S.G, Lee, C, Bedgar, D.L, Harper, A.R, Davin, L.B, Lewis, N.G, Kang, C. 登録日 2006-08-21 公開日 2006-10-05 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Mechanistic and Structural Studies of Apoform, Binary, and Ternary Complexes of the Arabidopsis Alkenal Double Bond Reductase at5G16970. J.Biol.Chem., 281, 2006
3D2V	Structure of the eukaryotic TPP-specific riboswitch bound to the antibacterial compound pyrithiamine pyrophosphate 分子名称: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-2-METHYLPYRIDINIUM, MAGNESIUM ION, TPP-specific riboswitch 著者 Thore, S, Frick, C, Ban, N. 登録日 2008-05-09 公開日 2008-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch J.Am.Chem.Soc., 130, 2008
2J3K	Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Ternary Complex II 分子名称: (2E,4R)-4-HYDROXYNON-2-ENAL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-dependent oxidoreductase 2-alkenal reductase 著者 Youn, B, Kim, S.J, Moinuddin, S.G, Lee, C, Bedgar, D.L, Harper, A.R, Davin, L.B, Lewis, N.G, Kang, C. 登録日 2006-08-22 公開日 2006-10-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Mechanistic and structural studies of apoform, binary, and ternary complexes of the Arabidopsis alkenal double bond reductase At5g16970. J. Biol. Chem., 281, 2006
4CXH	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement 分子名称: 18S RRNA - H44, 18S RRNA - H5-H14, 18S RRNA - H8, ... 著者 Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T. 登録日 2014-04-07 公開日 2014-07-16 最終更新日 2019-06-26 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement. Cell(Cambridge,Mass.), 158, 2014
4CXG	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement 分子名称: 18S RRNA - H44, 18S RRNA - H5-H14, 18S RRNA - H8, ... 著者 Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T. 登録日 2014-04-07 公開日 2014-07-16 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (8.7 Å) 主引用文献 Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement. Cell(Cambridge,Mass.), 158, 2014
4R0D	Crystal structure of a eukaryotic group II intron lariat 分子名称: GROUP IIB INTRON LARIAT, IRIDIUM HEXAMMINE ION, LIGATED EXONS, ... 著者 Robart, A.R, Chan, R.T, Peters, J.K, Rajashankar, K.R, Toor, N. 登録日 2014-07-30 公開日 2014-10-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.676 Å) 主引用文献 Crystal structure of a eukaryotic group II intron lariat. Nature, 514, 2014

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