PDB: 105 件ウェブページステータス検索Chemie searchBIRD

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6M79	Cryo-EM structure of Arabidopsis CRY under blue light-mediated activation 分子名称: ADENOSINE MONOPHOSPHATE, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE 著者 Ma, L, Guan, Z.Y, Yin, P. 登録日 2020-03-18 公開日 2020-10-14 最終更新日 2021-08-04 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insights into the photoactivation of Arabidopsis CRY2. Nat.Plants, 6, 2020
7V8Y	Crystal structure of mouse CRY2 in complex with SHP1703 compound 分子名称: 1-[(2R)-3-[3,6-bis(fluoranyl)carbazol-9-yl]-2-oxidanyl-propyl]imidazolidin-2-one, Cryptochrome-2 著者 Miller, S.A, Hirota, T. 登録日 2021-08-23 公開日 2022-08-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 CRY2 isoform selectivity of a circadian clock modulator with antiglioblastoma efficacy. Proc.Natl.Acad.Sci.USA, 119, 2022
7V8Z	Crystal structure of mouse CRY2 in complex with SHP656 compound 分子名称: 1-[(2R)-3-[3,6-bis(fluoranyl)carbazol-9-yl]-2-oxidanyl-propyl]imidazolidin-2-one, Cryptochrome-2 著者 Miller, S.A, Hirota, T. 登録日 2021-08-23 公開日 2022-08-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 CRY2 isoform selectivity of a circadian clock modulator with antiglioblastoma efficacy. Proc.Natl.Acad.Sci.USA, 119, 2022
7X0X	Cryo-EM Structure of Arabidopsis CRY2 in active conformation 分子名称: Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE 著者 Hao, Y.H, Zhang, X, Zhang, P. 登録日 2022-02-22 公開日 2023-01-04 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.56 Å) 主引用文献 Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling. Plant Commun., 4, 2023
6QTW	Crystal structure of an Arabidopsis WD40 domain in complex with a blue light photoreceptor 分子名称: Cryptochrome-1, E3 ubiquitin-protein ligase COP1, GLYCEROL, ... 著者 Hothorn, M, Lau, K. 登録日 2019-02-25 公開日 2019-07-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs. Embo J., 38, 2019
8C6C	Light SFX structure of D.m(6-4)photolyase at 300ps time delay 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2023-01-11 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
8C6H	Light SFX structure of D.m(6-4)photolyase at 2ps time delay 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2023-01-11 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
8C1U	SFX structure of D.m(6-4)photolyase 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2022-12-21 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
8C69	Light SFX structure of D.m(6-4)photolyase at 100 microsecond time delay 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2023-01-11 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
8C6A	Light SFX structure of D.m(6-4)photolyase at 1ps time delay 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2023-01-11 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
8C6B	Light SFX structure of D.m(6-4)photolyase at 20ps time delay 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2023-01-11 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
8C6F	Light SFX structure of D.m(6-4)photolyase at 400fs time delay 分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL 著者 Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S. 登録日 2023-01-11 公開日 2023-11-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography. Nat.Chem., 16, 2024
7X0Y	Cryo-EM Structure of Arabidopsis CRY2 tetramer in complex with CIB1 fragment 分子名称: CIB1 fragment, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE 著者 Hao, Y.H, Zhang, X, Zhang, P. 登録日 2022-02-22 公開日 2023-01-04 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.89 Å) 主引用文献 Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling. Plant Commun., 4, 2023
8A1H	Bacterial 6-4 photolyase from Vibrio cholerase 分子名称: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-4 photolyase (FeS-BCP, ... 著者 Essen, L.-O, Emmerich, H.J. 登録日 2022-06-01 公開日 2023-02-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural and Functional Analysis of a Prokaryotic (6-4) Photolyase from the Aquatic Pathogen Vibrio Cholerae † . Photochem.Photobiol., 99, 2023
7YKN	Crystal structure of (6-4) photolyase from Vibrio cholerae 分子名称: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, Cryptochrome/photolyase family protein, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Cakilkaya, B, Kavakli, I.H, DeMirci, H. 登録日 2022-07-23 公開日 2022-12-21 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The crystal structure of Vibrio cholerae (6-4) photolyase reveals interactions with cofactors and a DNA-binding region. J.Biol.Chem., 299, 2023
4DJA	Crystal structure of a prokaryotic (6-4) photolyase PhrB from Agrobacterium Tumefaciens with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore at 1.45A resolution 分子名称: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Scheerer, P, Zhang, F, Oberpichler, I, Lamparter, T, Krauss, N. 登録日 2012-02-01 公開日 2013-04-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore. Proc.Natl.Acad.Sci.USA, 110, 2013
4CDN	Crystal structure of M. mazei photolyase with its in vivo reconstituted 8-HDF antenna chromophore 分子名称: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, DEOXYRIBODIPYRIMIDINE PHOTOLYASE, DI(HYDROXYETHYL)ETHER, ... 著者 Kiontke, S, Batschauer, A, Essen, L.-O. 登録日 2013-11-01 公開日 2014-05-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and Evolutionary Aspects of Antenna Chromophore Usage by Class II Photolyases. J.Biol.Chem., 289, 2014
4CDM	Crystal structure of M. mazei photolyase soaked with synthetic 8-HDF 分子名称: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, DEOXYRIBODIPYRIMIDINE PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Kiontke, S, Batschauer, A, Essen, L.-O. 登録日 2013-11-01 公開日 2014-05-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and Evolutionary Aspects of Antenna Chromophore Usage by Class II Photolyases. J.Biol.Chem., 289, 2014
4U63	Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, DNA photolyase, ... 著者 Scheerer, P, Zhang, F, Kalms, J, von Stetten, D, Krauss, N, Oberpichler, I, Lamparter, T. 登録日 2014-07-26 公開日 2015-03-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways. J.Biol.Chem., 290, 2015
2XRY	X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei 分子名称: DEOXYRIBODIPYRIMIDINE PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O. 登録日 2010-09-24 公開日 2011-09-14 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA. Embo J., 30, 2011
2XRZ	X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei in complex with intact CPD-lesion 分子名称: ACETATE ION, COUNTERSTRAND-OLIGONUCLEOTIDE, CPD-COMPRISING OLIGONUCLEOTIDE, ... 著者 Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O. 登録日 2010-09-24 公開日 2011-09-14 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA. Embo J., 30, 2011
7F8T	Re-refinement of the 2XRY X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei 分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D. 登録日 2021-07-02 公開日 2022-03-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme. Nat.Chem., 14, 2022
6P43	Yeast cytochrome c peroxidase in complex with iso-1 cytochrome c (Y48K) 分子名称: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ... 著者 Yee, E.F, Crane, B.R. 登録日 2019-05-25 公開日 2019-10-23 最終更新日 2019-11-20 実験手法 X-RAY DIFFRACTION (1.913 Å) 主引用文献 Tuning Radical Relay Residues by Proton Management Rescues Protein Electron Hopping. J.Am.Chem.Soc., 141, 2019
6P42	Yeast cytochrome c peroxidase (W191Y:L232H) in complex with iso-1 cytochrome c 分子名称: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ... 著者 Yee, E.F, Crane, B.R. 登録日 2019-05-25 公開日 2019-10-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.905 Å) 主引用文献 Tuning Radical Relay Residues by Proton Management Rescues Protein Electron Hopping. J.Am.Chem.Soc., 141, 2019
7AZT	X-ray crystallographic structure of (6-4)photolyase from Drosophila melanogaster at room temperature 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, RE11660p 著者 Cellini, A, Wahlgren, W.Y, Henry, L, Westenhoff, S, Pandey, S. 登録日 2020-11-17 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature. Acta Crystallogr D Struct Biol, 77, 2021

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