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1UW8
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CRYSTAL STRUCTURE OF OXALATE DECARBOXYLASE
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, OXALATE DECARBOXYLASE OXDC
著者Just, V.J, Stevenson, C.E.M, Bowater, L, Tanner, A, Lawson, D.M, Bornemann, S.
登録日2004-02-02
公開日2004-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Closed Conformation of Bacillus Subtilis Oxalate Decarboxylase Oxdc Provides Evidence for the True Identity of the Active Site
J.Biol.Chem., 279, 2004
1IPJ
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CRYSTAL STRUCTURES OF RECOMBINANT AND NATIVE SOYBEAN BETA-CONGLYCININ BETA HOMOTRIMERS COMPLEXES WITH N-ACETYL-D-GLUCOSAMINE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-CONGLYCININ, BETA CHAIN
著者Maruyama, N, Adachi, M, Takahashi, K, Yagasaki, K, Kohno, M, Takenaka, Y, Okuda, E, Nakagawa, S, Mikami, B, Utsumi, S.
登録日2001-05-16
公開日2002-05-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of recombinant and native soybean beta-conglycinin beta homotrimers.
Eur.J.Biochem., 268, 2001
6V7L
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The structure of the P212121 crystal form of canavalin at 173 K
分子名称: BENZOIC ACID, Canavalin
著者McPherson, A.
登録日2019-12-08
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
5XTY
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Crystal Structure of 11S allergen from Cocos nucifera L.
分子名称: 11S globulin isoform 1
著者Vajravijayan, S, Nandhagopal, N, Gunasekaran, K.
登録日2017-06-21
公開日2018-06-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure determination and analysis of 11S coconut allergen: Cocosin
Mol. Immunol., 92, 2017
6V7J
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The C2221 crystal form of canavalin at 173 K
分子名称: BENZOIC ACID, CALCIUM ION, Canavalin, ...
著者McPherson, A.
登録日2019-12-08
公開日2020-02-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
1IPK
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CRYSTAL STRUCTURES OF RECOMBINANT AND NATIVE SOYBEAN BETA-CONGLYCININ BETA HOMOTRIMERS
分子名称: BETA-CONGLYCININ, BETA CHAIN
著者Maruyama, N, Adachi, M, Takahashi, K, Yagasaki, K, Kohno, M, Takenaka, Y, Okuda, E, Nakagawa, S, Mikami, B, Utsumi, S.
登録日2001-05-16
公開日2002-05-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of recombinant and native soybean beta-conglycinin beta homotrimers.
Eur.J.Biochem., 268, 2001
1FI2
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CRYSTAL STRUCTURE OF GERMIN (OXALATE OXIDASE)
分子名称: MANGANESE (II) ION, OXALATE OXIDASE
著者Woo, E.J, Dunwell, J.M, Goodenough, P.W, Marvier, A.C, Pickersgill, R.W.
登録日2000-08-03
公開日2001-05-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities.
Nat.Struct.Biol., 7, 2000
1J58
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Crystal Structure of Oxalate Decarboxylase
分子名称: FORMIC ACID, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Anand, R, Dorrestein, P.C, Kinsland, C, Begley, T.P, Ealick, S.E.
登録日2002-02-25
公開日2002-07-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of oxalate decarboxylase from Bacillus subtilis at 1.75 A resolution.
Biochemistry, 41, 2002
2PHL
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THE STRUCTURE OF PHASEOLIN AT 2.2 ANGSTROMS RESOLUTION: IMPLICATIONS FOR A COMMON VICILIN(SLASH)LEGUMIN STRUCTURE AND THE GENETIC ENGINEERING OF SEED STORAGE PROTEINS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHASEOLIN, PHOSPHATE ION
著者Lawrence, M.C, Izard, T, Beuchat, M, Blagrove, R.J, Colman, P.M.
登録日1994-07-07
公開日1994-09-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of phaseolin at 2.2 A resolution. Implications for a common vicilin/legumin structure and the genetic engineering of seed storage proteins.
J.Mol.Biol., 238, 1994
2UY8
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R92A mutant of Bacillus subtilis Oxalate Decarboxylase OxdC
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, OXALATE DECARBOXYLASE OXDC
著者Just, V.J, Burrell, M.R, Bowater, L, McRobbie, I, Stevenson, C.E.M, Lawson, D.M, Bornemann, S.
登録日2007-04-03
公開日2007-08-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Identity of the Active Site of Oxalate Decarboxylase and the Importance of the Stability of Active-Site Lid Conformations.
Biochem.J., 407, 2007
2UY9
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E162A mutant of Bacillus subtilis Oxalate Decarboxylase OxdC
分子名称: MANGANESE (II) ION, OXALATE DECARBOXYLASE OXDC
著者Just, V.J, Burrell, M.R, Bowater, L, McRobbie, I, Stevenson, C.E.M, Lawson, D.M, Bornemann, S.
登録日2007-04-03
公開日2007-08-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The Identity of the Active Site of Oxalate Decarboxylase and the Importance of the Stability of Active-Site Lid Conformations.
Biochem.J., 407, 2007
2V09
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SENS161-164DSSN mutant of Bacillus subtilis Oxalate Decarboxylase OxdC
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, OXALATE DECARBOXYLASE OXDC
著者Burrell, M.R, Just, V.J, Bowater, L, Fairhurst, S.A, Requena, L, Lawson, D.M, Bornemann, S.
登録日2007-05-10
公開日2007-10-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Oxalate Decarboxylase and Oxalate Oxidase Activities Can be Interchanged with a Specificity Switch of Up to 282 000 by Mutating an Active Site Lid.
Biochemistry, 46, 2007
2UYA
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DEL162-163 mutant of Bacillus subtilis Oxalate Decarboxylase OxdC
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Just, V.J, Burrell, M.R, Bowater, L, McRobbie, I, Stevenson, C.E.M, Lawson, D.M, Bornemann, S.
登録日2007-04-03
公開日2007-08-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Identity of the Active Site of Oxalate Decarboxylase and the Importance of the Stability of Active-Site Lid Conformations.
Biochem.J., 407, 2007
2UYB
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S161A mutant of Bacillus subtilis Oxalate Decarboxylase OxdC
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, MANGANESE (II) ION, ...
著者Just, V.J, Burrell, M.R, Bowater, L, McRobbie, I, Stevenson, C.E.M, Lawson, D.M, Bornemann, S.
登録日2007-04-03
公開日2007-08-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Identity of the Active Site of Oxalate Decarboxylase and the Importance of the Stability of Active-Site Lid Conformations.
Biochem.J., 407, 2007
2VQA
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Protein-folding location can regulate Mn versus Cu- or Zn-binding. Crystal Structure of MncA.
分子名称: ACETATE ION, MANGANESE (II) ION, SLL1358 PROTEIN
著者Tottey, S, Waldron, K.J, Firbank, S.J, Reale, B, Bessant, C, Sato, K, Gray, J, Banfield, M.J, Dennison, C, Robinson, N.J.
登録日2008-03-12
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Protein-Folding Location Can Regulate Manganese-Binding Versus Copper- or Zinc-Binding.
Nature, 455, 2008
2D5H
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Crystal Structure of Recombinant Soybean Proglycinin A3B4 subunit, its Comparison with Mature Glycinin A3B4 subunit, Responsible for Hexamer Assembly
分子名称: CARBONATE ION, MAGNESIUM ION, glycinin A3B4 subunit
著者Itoh, T, Adachi, M, Masuda, T, Mikami, B, Utsumi, S.
登録日2005-11-01
公開日2006-11-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
2ETE
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Recombinant oxalate oxidase in complex with glycolate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYOXYLIC ACID, MANGANESE (II) ION, ...
著者Opaleye, O, Rose, R.-S, Whittaker, M.M, Woo, E.-J, Whittaker, J.W, Pickersgill, R.W.
登録日2005-10-27
公開日2005-11-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase
J.Biol.Chem., 281, 2006
2EVX
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Crystal structure of pumpkin seed globulin
分子名称: 11S globulin beta subunit, MAGNESIUM ION
著者Itoh, T, Fukuda, T, Mikami, B, Utsumi, S.
登録日2005-11-01
公開日2006-11-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Pumpkin Seed Globulin
To be Published
2ET1
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Oxalate oxidase in complex with substrate analogue glycolate
分子名称: GLYOXYLIC ACID, MANGANESE (II) ION, Oxalate oxidase 1
著者Rose, R.-S, Opaleye, O, Woo, E.-J, Pickersgill, R.W.
登録日2005-10-27
公開日2005-11-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase
J.Biol.Chem., 281, 2006
2ET7
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Structural and spectroscopic insights into the mechanism of oxalate oxidase
分子名称: MANGANESE (II) ION, Oxalate oxidase 1
著者Opaleye, O, Rose, R.-S, Whittaker, M.M, Woo, E.-J, Whittaker, J.W, Pickersgill, R.W.
登録日2005-10-27
公開日2005-11-22
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase
J.Biol.Chem., 281, 2006
2EA7
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Crystal Structure of Adzuki Bean 7S Globulin-1
分子名称: 7S globulin-1, ACETIC ACID, CALCIUM ION
著者Fukuda, T, Mikami, B, Utsumi, S.
登録日2007-01-30
公開日2008-02-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Characterization and crystallography of recombinant 7S globulins of Adzuki bean and structure-function relationships with 7S globulins of various crops.
J.Agric.Food Chem., 56, 2008
2EAA
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Crystal Structure of Adzuki Bean 7S Globulin-3
分子名称: 7S globulin-3, ACETIC ACID, CALCIUM ION, ...
著者Fukuda, T, Mikami, B, Utsumi, S.
登録日2007-01-31
公開日2008-02-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Characterization and crystallography of recombinant 7S globulins of Adzuki bean and structure-function relationships with 7S globulins of various crops.
J.Agric.Food Chem., 56, 2008
2E9Q
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Recombinant pro-11S globulin of pumpkin
分子名称: 11S globulin subunit beta, CHLORIDE ION, PHOSPHATE ION
著者Fukuda, T, Prak, K, Itoh, T, Masuda, T, Maruyama, N, Mikami, B, Utsumi, S.
登録日2007-01-26
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
2D5F
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Crystal Structure of Recombinant Soybean Proglycinin A3B4 subunit, its Comparison with Mature Glycinin A3B4 subunit, Responsible for Hexamer Assembly
分子名称: CARBONATE ION, MAGNESIUM ION, glycinin A3B4 subunit
著者Itoh, T, Adachi, M, Masuda, T, Mikami, B, Utsumi, S.
登録日2005-11-01
公開日2006-11-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
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