PDB: 11000 件ウェブページステータス検索Chemie searchBIRD

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8CGR	Apramycin bound to the 30S body 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ... 著者 Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N. 登録日 2023-02-06 公開日 2023-07-26 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.12 Å) 主引用文献 Structural conservation of antibiotic interaction with ribosomes. Nat.Struct.Mol.Biol., 30, 2023
8CAM	Evernimicin bound to the 50S subunit 分子名称: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ... 著者 Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N. 登録日 2023-01-24 公開日 2023-07-26 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (1.86 Å) 主引用文献 Structural conservation of antibiotic interaction with ribosomes. Nat.Struct.Mol.Biol., 30, 2023
8CA7	Omadacycline and spectinomycin bound to the 30S ribosomal subunit head 分子名称: 16S rRNA, 30S ribosomal protein S7, MAGNESIUM ION, ... 著者 Paternoga, H, Crowe-McAuliffe, C, Wilson, D.N. 登録日 2023-01-24 公開日 2023-08-02 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (2.06 Å) 主引用文献 Structural conservation of antibiotic interaction with ribosomes. Nat.Struct.Mol.Biol., 30, 2023
8CGV	Tiamulin bound to the 50S subunit 分子名称: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ... 著者 Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N. 登録日 2023-02-06 公開日 2023-08-02 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (1.66 Å) 主引用文献 Structural conservation of antibiotic interaction with ribosomes. Nat.Struct.Mol.Biol., 30, 2023
8CF8	Eravacycline bound to the 30S head 分子名称: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ... 著者 Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N. 登録日 2023-02-03 公開日 2023-08-02 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.2 Å) 主引用文献 Structural conservation of antibiotic interaction with ribosomes. Nat.Struct.Mol.Biol., 30, 2023
3ZSC	Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima 分子名称: 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, GLYCEROL, PECTATE TRISACCHARIDE-LYASE, ... 著者 McDonough, M.A, Thymark, M, Frisner, H, Hotchkiss, A, Sonksen, C, Bjornvad, M, Johansen, K.S, Larsen, S. 登録日 2011-06-24 公開日 2012-07-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Catalytic Function and Substrate Recognition of the Pectate Lyase from Thermotoga Maritima To be Published
3VHO	Y61-gg insertion mutant of Tm-Cellulase 12A 分子名称: Endo-1,4-beta-glucanase 著者 Cheng, Y.-S, Ko, T.-P, Guo, R.-T, Liu, J.-R. 登録日 2011-08-30 公開日 2012-07-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Enhanced activity of Thermotoga maritima cellulase 12A by mutating a unique surface loop Appl.Microbiol.Biotechnol., 95, 2012
3GYV	Crystal structure of nucleosome assembly protein from Plasmodium falciparum 分子名称: IODIDE ION, Nucleosome assembly protein 1, putative 著者 Yogavel, M, Gill, J, Sharma, A. 登録日 2009-04-06 公開日 2009-05-12 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein. Acta Crystallogr.,Sect.D, 65, 2009
3GYW	Crystal structure of nucleosome assembly protein from Plasmodium falciparum at 2.4 A resolution 分子名称: Nucleosome assembly protein 1, putative 著者 Yogavel, M, Gill, J, Sharma, A. 登録日 2009-04-06 公開日 2009-05-12 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein. Acta Crystallogr.,Sect.D, 65, 2009
1RIY	HU mutant V42I from Thermotoga maritima 分子名称: Hu DNA-binding protein 著者 Kavounis, C, Petratos, K, Tucker, P, Vorgias, C.E. 登録日 2003-11-18 公開日 2004-12-07 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The structure of the DNA binding protein HU Thermotoga maritima with a single conservative substitution (V42I) that confers significant destabilisation To be Published
6A6U	Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with R61G mutation, in complex with FSA 分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, 1-S-(carboxymethyl)-1-thio-beta-D-fructopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K. 登録日 2018-06-29 公開日 2019-05-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.945 Å) 主引用文献 Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis. Sci Rep, 9, 2019
5AVY	Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 20 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
5AW0	Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 55 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
6A6T	Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with R61G mutation 分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl amine: oxygen oxidoreductase, ... 著者 Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K. 登録日 2018-06-29 公開日 2019-05-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.901 Å) 主引用文献 Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis. Sci Rep, 9, 2019
5AW6	Kinetics by X-ray crystallography: Rb+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 5.5 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
5B2K	A crucial role of Cys218 in the stabilization of an unprecedented auto-inhibition form of MAP2K7 分子名称: Dual specificity mitogen-activated protein kinase kinase 7 著者 Sogabe, Y, Hashimoto, T, Matsumoto, T, Kirii, Y, Sawa, M, Kinoshita, T. 登録日 2016-01-19 公開日 2016-04-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 A crucial role of Cys218 in configuring an unprecedented auto-inhibition form of MAP2K7 Biochem.Biophys.Res.Commun., 473, 2016
6A6V	Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with 7 additional mutations, in complex with FSA 分子名称: 1-S-(carboxymethyl)-1-thio-beta-D-fructopyranose, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl amine: oxygen oxidoreductase 著者 Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K. 登録日 2018-06-29 公開日 2019-05-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis. Sci Rep, 9, 2019
5AVS	Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 3.5 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
2AX3	CRYSTAL STRUCTURE OF A PUTATIVE CARBOHYDRATE KINASE (TM0922) FROM THERMOTOGA MARITIMA MSB8 AT 2.25 A RESOLUTION 分子名称: GLYCEROL, hypothetical protein TM0922, unknown peptide 著者 Joint Center for Structural Genomics (JCSG) 登録日 2005-09-02 公開日 2005-10-04 最終更新日 2023-01-25 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Crystal structure of hypothetical protein (tm0922) from THERMOTOGA MARITIMA at 2.27 A resolution To be published
5AW4	Kinetics by X-ray crystallography: Rb+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 1.5 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
6A6R	Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans, Seleno-methionine Derivative 分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl amine: oxygen oxidoreductase, ... 著者 Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K. 登録日 2018-06-29 公開日 2019-05-15 実験手法 X-RAY DIFFRACTION (2.609 Å) 主引用文献 Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis. Sci Rep, 9, 2019
5AW9	Kinetics by X-ray crystallography: native E2.MgF42-.2K+ crystal for Rb+ bound crystals 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
5AVU	Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 7.0 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
5AW2	Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+ crystal after 85 min 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... 著者 Ogawa, H, Cornelius, F, Hirata, A, Toyoshima, C. 登録日 2015-07-01 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Sequential substitution of K(+) bound to Na(+),K(+)-ATPase visualized by X-ray crystallography. Nat Commun, 6, 2015
5B2M	A crucial role of Cys218 in the stabilization of an unprecedented auto-inhibition form of MAP2K7 分子名称: Dual specificity mitogen-activated protein kinase kinase 7 著者 Sogabe, Y, Hashimoto, T, Matsumoto, T, Kirii, Y, Sawa, M, Kinoshita, T. 登録日 2016-01-19 公開日 2016-04-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.06 Å) 主引用文献 A crucial role of Cys218 in configuring an unprecedented auto-inhibition form of MAP2K7 Biochem.Biophys.Res.Commun., 473, 2016

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