Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5H46
DownloadVisualize
BU of 5h46 by Molmil
Mycobacterium smegmatis Dps1 mutant - F47E
分子名称: DNA protection during starvation protein, FE (II) ION
著者Williams, S.M, Chandran, A.V, Vijayan, M, Chatterji, D.
登録日2016-10-31
公開日2017-09-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A Mutation Directs the Structural Switch of DNA Binding Proteins under Starvation to a Ferritin-like Protein Cage.
Structure, 25, 2017
4X1D
DownloadVisualize
BU of 4x1d by Molmil
Ytterbium-bound human serum transferrin
分子名称: GLYCEROL, MALONATE ION, Serotransferrin, ...
著者Wang, M, Zhang, H, Sun, H.
登録日2014-11-24
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献"Anion clamp" allows flexible protein to impose coordination geometry on metal ions
Chem.Commun.(Camb.), 51, 2015
4X1B
DownloadVisualize
BU of 4x1b by Molmil
Human serum transferrin with ferric ion bound at the C-lobe only
分子名称: FE (III) ION, GLYCEROL, MALONATE ION, ...
著者Wang, M, Zhang, H, Sun, H.
登録日2014-11-24
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献"Anion clamp" allows flexible protein to impose coordination geometry on metal ions
Chem.Commun.(Camb.), 51, 2015
4PH4
DownloadVisualize
BU of 4ph4 by Molmil
The crystal structure of Human VPS34 in complex with PIK-III
分子名称: 4'-(cyclopropylmethyl)-N~2~-(pyridin-4-yl)-4,5'-bipyrimidine-2,2'-diamine, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
著者Knapp, M.S, Elling, R.A.
登録日2014-05-04
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo.
Nat.Cell Biol., 16, 2014
2ZG8
DownloadVisualize
BU of 2zg8 by Molmil
Crystal Structure of Pd(allyl)/apo-H49AFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Abe, S, Niemeyer, J, Abe, M, Ueno, T, Hikage, T, Erker, G, Watanabe, Y.
登録日2008-01-18
公開日2008-08-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
2ZG9
DownloadVisualize
BU of 2zg9 by Molmil
Crystal Structure of Pd(allyl)/apo-H114AFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Abe, S, Niemeyer, J, Abe, M, Ueno, T, Hikage, T, Erker, G, Watanabe, Y.
登録日2008-01-18
公開日2008-08-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
2ZG7
DownloadVisualize
BU of 2zg7 by Molmil
Crystal Structure of Pd(allyl)/apo-Fr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Abe, S, Niemeyer, J, Abe, M, Ueno, T, Hikage, T, Erker, G, Watanabe, Y.
登録日2008-01-18
公開日2008-08-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
6JOB
DownloadVisualize
BU of 6job by Molmil
Ferritin variant with "GMG" motif
分子名称: Ferritin heavy chain
著者Zheng, B.W, Zhou, K, Zhang, T, Lv, C, Wang, H, Zhao, G.
登録日2019-03-20
公開日2020-03-25
最終更新日2024-03-27
実験手法SOLUTION SCATTERING (2.93 Å), X-RAY DIFFRACTION
主引用文献Self-assembly of protein nanocage into designed 2D and 3D networks by grafting amyloidogenic motifs on the exterior surfaces.
To Be Published
7K3V
DownloadVisualize
BU of 7k3v by Molmil
Apoferritin structure at 1.34 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with K3 detector
分子名称: Ferritin heavy chain, SODIUM ION, ZINC ION
著者Zhang, K, Pintilie, G, Li, S, Schmid, M, Chiu, W.
登録日2020-09-14
公開日2020-11-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.34 Å)
主引用文献Resolving individual atoms of protein complex by cryo-electron microscopy.
Cell Res., 30, 2020
7K3W
DownloadVisualize
BU of 7k3w by Molmil
Apoferritin structure at 1.36 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector
分子名称: Ferritin heavy chain, SODIUM ION, ZINC ION
著者Zhang, K, Pintilie, G, Li, S, Schmid, M, Chiu, W.
登録日2020-09-14
公開日2020-11-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.36 Å)
主引用文献Resolving individual atoms of protein complex by cryo-electron microscopy.
Cell Res., 30, 2020
3F32
DownloadVisualize
BU of 3f32 by Molmil
Horse spleen apoferritin
分子名称: CADMIUM ION, Ferritin light chain, SULFATE ION
著者Vedula, L.S, Economou, N.J, Rossi, M.J, Eckenhoff, R.G, Loll, P.J.
登録日2008-10-30
公開日2009-07-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A unitary anesthetic binding site at high resolution.
J.Biol.Chem., 284, 2009
2QQY
DownloadVisualize
BU of 2qqy by Molmil
Crystal structure of ferritin like, diiron-carboxylate proteins from Bacillus anthracis str. Ames
分子名称: Sigma B operon
著者Kim, Y, Joachimiak, G, Wu, R, Patterson, S, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-07-27
公開日2007-08-14
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Ferritin like, Diiron-carboxylate Proteins from Bacillus anthracis str. Ames.
To be Published
7BON
DownloadVisualize
BU of 7bon by Molmil
Crystal structure of recombinant horse spleen apo-R52C/E56C/R59C/E63C-Fr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Hishikawa, Y, Maity, B, Ito, N, Abe, S, Lu, D, Ueno, T.
登録日2020-03-19
公開日2021-01-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Design of Multinuclear Gold Binding Site at the Two-fold Symmetric Interface of the Ferritin Cage
Chem Lett., 49, 2021
3V8X
DownloadVisualize
BU of 3v8x by Molmil
The crystal structure of transferrin binding protein A (TbpA) from Neisserial meningitidis serogroup B in complex with full length human transferrin
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Noinaj, N, Easley, N, Buchanan, S.K.
登録日2011-12-23
公開日2012-02-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for iron piracy by pathogenic Neisseria.
Nature, 483, 2012
8Y6F
DownloadVisualize
BU of 8y6f by Molmil
The crystal structure of MMPs cleavable human heavy chain ferritin
分子名称: CHLORIDE ION, FE (III) ION, Ferritin, ...
著者Yuan, C, Huang, M.
登録日2024-02-02
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Engineered protein cages with enhanced extracellular drug release for elevated antitumor efficacy.
Int.J.Biol.Macromol., 267, 2024
3SKP
DownloadVisualize
BU of 3skp by Molmil
The structure of apo-human transferrin C-lobe with bound sulfate ions
分子名称: SULFATE ION, Serotransferrin
著者Noinaj, N, Steere, A.N, Mason, A.B, Buchanan, S.K.
登録日2011-06-22
公開日2012-02-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for iron piracy by pathogenic Neisseria.
Nature, 483, 2012
6SEV
DownloadVisualize
BU of 6sev by Molmil
Structure of Dps from Listeria innocua soaked with 10 mM zinc for 120 minutes
分子名称: DNA starvation/stationary phase protection protein, ZINC ION
著者Zeth, K, Okuda, M.
登録日2019-07-30
公開日2019-09-25
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metal Positions and Translocation Pathways of the Dodecameric Ferritin-like Protein Dps.
Inorg.Chem., 58, 2019
3V83
DownloadVisualize
BU of 3v83 by Molmil
The 2.1 angstrom crystal structure of diferric human transferrin
分子名称: BICARBONATE ION, FE (III) ION, HEXAETHYLENE GLYCOL, ...
著者Noinaj, N, Steere, A, Mason, A.B, Buchanan, S.K.
登録日2011-12-22
公開日2012-02-15
最終更新日2012-04-18
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Structural basis for iron piracy by pathogenic Neisseria.
Nature, 483, 2012
1EH3
DownloadVisualize
BU of 1eh3 by Molmil
R210K N-TERMINAL LOBE HUMAN LACTOFERRIN
分子名称: CARBONATE ION, FE (III) ION, LACTOFERRIN
著者Peterson, N.A, Anderson, B.F, Jameson, G.B, Tweedie, J.W, Baker, E.N.
登録日2000-02-18
公開日2000-03-01
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and iron-binding properties of the R210K mutant of the N-lobe of human lactoferrin: implications for iron release from transferrins.
Biochemistry, 39, 2000
1BKA
DownloadVisualize
BU of 1bka by Molmil
OXALATE-SUBSTITUTED DIFERRIC LACTOFERRIN
分子名称: FE (III) ION, LACTOFERRIN, OXALATE ION
著者Baker, H.M, Smith, C.A, Baker, E.N.
登録日1996-04-15
公開日1996-11-08
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Anion binding by transferrins: importance of second-shell effects revealed by the crystal structure of oxalate-substituted diferric lactoferrin.
Biochemistry, 35, 1996
1OQU
DownloadVisualize
BU of 1oqu by Molmil
A protein coordinated tri-nuclear Fe complex formed during soaking of crystals of the ribonucleotide reductase R2F protein from Corynebacterium Ammoniagenes
分子名称: ACETATE ION, FE (III) ION, OXYGEN MOLECULE, ...
著者Hogbom, M, Nordlund, P.
登録日2003-03-11
公開日2004-04-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A protein carboxylate coordinated oxo-centered tri-nuclear iron complex with possible implications for ferritin mineralization
Febs Lett., 567, 2004
1DSN
DownloadVisualize
BU of 1dsn by Molmil
D60S N-TERMINAL LOBE HUMAN LACTOFERRIN
分子名称: CARBONATE ION, FE (III) ION, LACTOFERRIN
著者Faber, H.R, Norris, G.E, Baker, E.N.
登録日1995-12-13
公開日1996-03-08
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Altered domain closure and iron binding in transferrins: the crystal structure of the Asp60Ser mutant of the amino-terminal half-molecule of human lactoferrin.
J.Mol.Biol., 256, 1996
7S4Q
DownloadVisualize
BU of 7s4q by Molmil
M. xanthus encapsulin EncA bound to EncC targeting peptide
分子名称: EncA, EncC targeting peptide
著者Eren, E.
登録日2021-09-09
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S2T
DownloadVisualize
BU of 7s2t by Molmil
M. xanthus encapsulin EncA bound to EncB targeting peptide
分子名称: EncA, EncB targeting peptide
著者Eren, E.
登録日2021-09-03
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
8WQV
DownloadVisualize
BU of 8wqv by Molmil
Fe-O nanocluster of form-VIII in the 4-fold channel of Ureaplasma diversum ferritin
分子名称: FE (III) ION, Ferritin
著者Wang, W.M, Ma, D.Y, Gong, W.J, Wu, L.J, Wang, H.F.
登録日2023-10-12
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon