PDB: 593 件ウェブページステータス検索Chemie searchBIRD

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3GZ6	Crystal structure of Shewanella oneidensis NrtR complexed with a 27mer DNA 分子名称: DNA (27-MER), MutT/nudix family protein, SODIUM ION 著者 Huang, N, Zhang, H. 登録日 2009-04-06 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.901 Å) 主引用文献 Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism Structure, 17, 2009
5DD4	Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI 分子名称: 1,2-ETHANEDIOL, ACETATE ION, TRANSCRIPTIONAL REGULATOR AraR 著者 Chang, C, Tesar, C, Rodionov, D, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2015-08-24 公開日 2015-09-09 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 A novel transcriptional regulator of L-arabinose utilization in human gut bacteria. Nucleic Acids Res., 43, 2015
5DDG	The structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI in complex with target double strand DNA 分子名称: DNA (27-MER), FORMIC ACID, MALONIC ACID, ... 著者 Chang, C, Tesar, C, Rodionov, D, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2015-08-24 公開日 2015-09-09 最終更新日 2015-12-16 実験手法 X-RAY DIFFRACTION (3.06 Å) 主引用文献 A novel transcriptional regulator of L-arabinose utilization in human gut bacteria. Nucleic Acids Res., 43, 2015
5DEQ	Crystal structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI in complex with L-arabinose 分子名称: FORMIC ACID, SULFATE ION, TRANSCRIPTIONAL REGULATOR AraR, ... 著者 Chang, C, Tesar, C, Rodionov, D, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2015-08-25 公開日 2015-10-21 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A novel transcriptional regulator of L-arabinose utilization in human gut bacteria. Nucleic Acids Res., 43, 2015
5BS6	Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI 分子名称: 1,2-ETHANEDIOL, transcriptional regulator AraR 著者 Chang, C, Tesar, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2015-06-01 公開日 2015-06-17 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 A novel transcriptional regulator of L-arabinose utilization in human gut bacteria. Nucleic Acids Res., 43, 2015
1VK6	Crystal structure of NADH pyrophosphatase (1790429) from Escherichia coli k12 at 2.20 A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NADH pyrophosphatase, ZINC ION 著者 Joint Center for Structural Genomics (JCSG) 登録日 2004-04-30 公開日 2004-05-11 最終更新日 2023-01-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of NADH pyrophosphatase (1790429) from Escherichia coli k12 at 2.20 A resolution To be published
5GG5	Crystal structure of Mycobacterium smegmatis MutT1 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Hydrolase, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GG8	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP, 8-oxo-dGMP and pyrophosphate (II) 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Hydrolase, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GG9	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GTP, 8-oxo-GMP and pyrophosphate 分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, Hydrolase, NUDIX family protein, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GGA	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GDP, 8-oxo-GMP and pyrophosphate 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GGD	Crystal structure of Mycobacterium smegmatis MutT1 in complex with phosphate and magnesium ions (excess magnesium, II) 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GG6	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP 分子名称: 1,2-ETHANEDIOL, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GGB	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGDP 分子名称: 2'-deoxy-8-oxoguanosine 5'-(trihydrogen diphosphate), Hydrolase, NUDIX family protein 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GG7	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP, 8-oxo-dGMP and pyrophosphate (I) 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Hydrolase, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GGC	Crystal structure of Mycobacterium smegmatis MutT1 in complex with phosphate and magnesium ions (excess magnesium, I) 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
6YWS	The structure of the large subunit of the mitoribosome from Neurospora crassa 分子名称: 50S ribosomal protein L14, 50S ribosomal protein L17, 50S ribosomal protein L24, ... 著者 Amunts, A, Itoh, Y, Naschberger, A. 登録日 2020-04-30 公開日 2020-11-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.74 Å) 主引用文献 Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi. Nat Commun, 11, 2020
6YWX	The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site 分子名称: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ... 著者 Amunts, A, Itoh, Y, Naschberger, A. 登録日 2020-04-30 公開日 2020-11-11 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi. Nat Commun, 11, 2020
6YWV	The structure of the Atp25 bound assembly intermediate of the mitoribosome from Neurospora crassa 分子名称: 23 S rRNA, 50S ribosomal protein L14, 50S ribosomal protein L17, ... 著者 Amunts, A, Itoh, Y, Naschberger, A. 登録日 2020-04-30 公開日 2020-11-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi. Nat Commun, 11, 2020

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