PDB: 37722 件ウェブページステータス検索Chemie searchBIRD

---

2NZD	Nucleosome core particle containing 145 bp of DNA 分子名称: DNA (145-MER), Histone H2B, Histone H3, ... 著者 Ong, M.S, Richmond, T.J, Davey, C.A. 登録日 2006-11-23 公開日 2007-04-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 DNA stretching and extreme kinking in the nucleosome core J.Mol.Biol., 368, 2007
8GHZ	Cryo-EM structure of fish immunogloblin M-Fc 分子名称: Teleost immunoglobulin M protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Lyu, M, Stadtmueller, B.M, Malyutin, A.G. 登録日 2023-03-13 公開日 2023-11-08 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 The structure of the teleost Immunoglobulin M core provides insights on polymeric antibody evolution, assembly, and function. Nat Commun, 14, 2023
1QKQ	CHARCOT-LEYDEN CRYSTAL PROTEIN - MANNOSE COMPLEX 分子名称: EOSINOPHIL LYSOPHOSPHOLIPASE, alpha-D-mannopyranose 著者 Swaminathan, G.J, Leonidas, D.D, Acharya, K.R. 登録日 1999-07-31 公開日 2000-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Selective recognition of mannose by the human eosinophil Charcot-Leyden crystal protein (galectin-10): a crystallographic study at 1.8 A resolution. Biochemistry, 38, 1999
8QEW	Eosinophil Derived Neurotoxin/RNase 2 in complex with Tartrate 分子名称: L(+)-TARTARIC ACID, Non-secretory ribonuclease 著者 Li, J, Kang, X, Prats-Ejarque, G, Boix, E. 登録日 2023-09-01 公開日 2024-09-11 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Eosinophil Derived Neurotoxin/RNase 2 in complex with Tartrate To Be Published
7ABH	Human pre-Bact-2 spliceosome (SF3b/U2 snRNP portion) 分子名称: Cell division cycle 5-like protein, DNA/RNA-binding protein KIN17, MINX M3 pre-mRNA, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2020-12-09 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020
6AGY	Aspergillus fumigatus Af293 NDK 分子名称: Nucleoside diphosphate kinase 著者 Hu, Y, Han, L. 登録日 2018-08-15 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Characterization of crystal structure and key residues of Aspergillus fumigatus nucleoside diphosphate kinase. Biochem. Biophys. Res. Commun., 511, 2019
2BEF	CRYSTAL STRUCTURE OF NDP KINASE COMPLEXED WITH MG, ADP, AND BEF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Xu, Y.W, Cherfils, J. 登録日 1998-05-26 公開日 1998-08-12 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP. Proc.Natl.Acad.Sci.USA, 94, 1997
3NGT	Structure of Leishmania NDKb complexed with AMP. 分子名称: ADENOSINE MONOPHOSPHATE, Nucleoside diphosphate kinase 著者 Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. 登録日 2010-06-13 公開日 2011-04-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst, 7, 2011
3NGU	Structure of Leishmania NDKb complexed with ADP. 分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 著者 Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. 登録日 2010-06-13 公開日 2011-04-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst, 7, 2011
2C02	Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A 分子名称: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, NONSECRETORY RIBONUCLEASE 著者 Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. 登録日 2005-08-24 公開日 2006-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A. Biochemistry, 45, 2006
1XIQ	Plasmodium falciparum Nucleoside diphosphate kinase B 分子名称: Nucleoside diphosphate kinase B 著者 Robien, M.A, Bosch, J, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP) 登録日 2004-09-21 公開日 2004-10-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Crystal structure of Nucleoside diphosphate kinase B from Plasmodium falciparum To be Published
3LZ1	Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 2) 分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A, ... 著者 Vasudevan, D, Chua, E.Y.D, Davey, C.A. 登録日 2010-03-01 公開日 2010-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of nucleosome core particles containing the '601' strong positioning sequence J.Mol.Biol., 403, 2010
3LZ0	Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 1) 分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A, ... 著者 Vasudevan, D, Chua, E.Y.D, Davey, C.A. 登録日 2010-03-01 公開日 2010-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of nucleosome core particles containing the '601' strong positioning sequence J.Mol.Biol., 403, 2010
2C01	Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A 分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, NONSECRETORY RIBONUCLEASE 著者 Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. 登録日 2005-08-24 公開日 2006-01-18 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A. Biochemistry, 45, 2006
1WKJ	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 分子名称: nucleoside diphosphate kinase 著者 Takeishi, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-31 公開日 2005-08-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 To be Published
3O62	Nucleosome core particle modified with a cisplatin 1,3-cis-{Pt(NH3)2}2+-d(GpTpG) intrastrand cross-link 分子名称: Cisplatin, DNA (146-MER), Histone H2A type 1, ... 著者 Lippard, S.J, Todd, R.C. 登録日 2010-07-28 公開日 2011-01-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.216 Å) 主引用文献 Consequences of Cisplatin binding on nucleosome structure and dynamics. Chem.Biol., 17, 2010
2FHO	NMR solution structure of the human spliceosomal protein complex p14-SF3b155 分子名称: spliceosomal protein SF3b155, spliceosomal protein p14 著者 Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-26 公開日 2006-12-26 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 NMR solution structure of the human spliceosomal protein complex p14-SF3b155 To be Published
1JIM	STEREOSPECIFIC REACTION OF 3-METHOXY-4-CHLORO-7-AMINOISOCOUMARIN WITH CRYSTALLINE PORCINE PANCREATIC ELASTASE 分子名称: METHYL(2-ACETOXY-2-(2-CARBOXY-4-AMINO-PHENYL))ACETATE, PORCINE PANCREATIC ELASTASE, SULFATE ION 著者 Meyer, E. 登録日 1993-03-19 公開日 1994-01-31 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Stereospecific Reaction of 3-Methoxy-4-Chloro-7-Aminoisocoumarin with Crystalline Porcine Pancreatic Elastase J.Am.Chem.Soc., 107, 1985
4QXX	Structure of the amyloid forming peptide GNLVS (residues 26-30) from the eosinophil major basic protein (EMBP) 分子名称: Bone marrow proteoglycan 著者 Soriaga, A.B, Soragni, A, Sawaya, M.R, Eisenberg, D. 登録日 2014-07-22 公開日 2015-03-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.445 Å) 主引用文献 Toxicity of Eosinophil MBP Is Repressed by Intracellular Crystallization and Promoted by Extracellular Aggregation. Mol.Cell, 57, 2015
7KBE	Nucleosome isolated from metaphase chromosome formed in Xenopus egg extract (oligo fraction) 分子名称: DNA (157-MER), Histone H2A, Histone H2B 1.1, ... 著者 Arimura, Y, Funabiki, H. 登録日 2020-10-02 公開日 2021-09-15 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural features of nucleosomes in interphase and metaphase chromosomes. Mol.Cell, 81, 2021
7KBD	Nucleosome in interphase chromosome formed in Xenopus egg extract (oligo fraction) 分子名称: DNA (151-MER), Histone H2A, Histone H2B 1.1, ... 著者 Arimura, Y, Funabiki, H. 登録日 2020-10-02 公開日 2021-09-15 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.38 Å) 主引用文献 Structural features of nucleosomes in interphase and metaphase chromosomes. Mol.Cell, 81, 2021
8VWU	Nucleosome containing 8oxoG at SHL4 分子名称: 601 I strand (damaged strand), 601 J strand (non-damaged strand), Histone H2A type 1, ... 著者 Weaver, T.M, Ling, J.A, Freudenthal, B.D. 登録日 2024-02-02 公開日 2024-10-30 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Nucleosome containing 8oxoG at SHL4 To Be Published
8VWS	Nucleosome containing 8oxoG at SHL-6 分子名称: 601 I strand (non-damaged strand), 601 J strand (damaged strand), Histone H2A type 1, ... 著者 Weaver, T.M, Ling, J.A, Freudenthal, B.D. 登録日 2024-02-02 公開日 2024-10-30 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Nucleosome containing 8oxoG at SHL-6 To Be Published
8QVZ	Human NDPK-C in complex with cAMP 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.774 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
8QW1	Human NDPK-C in complex with ADP and Mg2+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 3 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024

<17181920212223242526272829303132>