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9BF2
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BU of 9bf2 by Molmil
MID domain of Ago2 bound to UMP
分子名称: Protein argonaute-2, URIDINE-5'-MONOPHOSPHATE
著者Harp, J.M, Egli, M.
登録日2024-04-16
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structure and Stability of Ago2 MID-Nucleotide Complexes: All-in-One (Drop) His 6 -SUMO Tag Removal, Nucleotide Binding, and Crystal Growth.
Curr Protoc, 4, 2024
5K52
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BU of 5k52 by Molmil
Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012
分子名称: Aldehyde decarbonylase, octadecanal
著者Park, A.K, Kim, H-.W.
登録日2016-05-23
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012 and Oscillatoria sp. KNUA011.
Biochem. Biophys. Res. Commun., 477, 2016
5JRG
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BU of 5jrg by Molmil
Crystal structure of the nucleosome containing the DNA with tetrahydrofuran (THF)
分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ...
著者Osakabe, A, Arimura, Y, Horikoshi, N, Kurumizaka, H.
登録日2016-05-06
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Polymorphism of apyrimidinic DNA structures in the nucleosome
Sci Rep, 7, 2017
2IHO
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BU of 2iho by Molmil
Crystal structure of MOA, a lectin from the mushroom Marasmius oreades in complex with the trisaccharide Gal(1,3)Gal(1,4)GlcNAc
分子名称: Lectin, beta-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Grahn, E, Askarieh, G, Holmner, A, Tateno, H, Winter, H.C, Goldstein, I.J, Krengel, U.
登録日2006-09-27
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal structure of the marasmius oreades mushroom lectin in complex with a xenotransplantation epitope.
J.Mol.Biol., 369, 2007
9BAZ
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BU of 9baz by Molmil
CryoEM structure of DIM2-HP1 complex
分子名称: DNA (cytosine-5-)-methyltransferase, Heterochromatin protein one, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Song, J, Shao, Z.
登録日2024-04-05
公開日2024-07-24
最終更新日2025-02-05
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Multi-layered heterochromatin interaction as a switch for DIM2-mediated DNA methylation.
Nat Commun, 15, 2024
5K6F
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BU of 5k6f by Molmil
Crystal structure of prefusion-stabilized RSV F single-chain 9-19 DS-Cav1 variant.
分子名称: Fusion glycoprotein F0
著者Joyce, M.G, Zhang, B, Lai, Y.T, Mascola, J.R, Kwong, P.D.
登録日2016-05-24
公開日2016-08-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Iterative structure-based improvement of a fusion-glycoprotein vaccine against RSV.
Nat.Struct.Mol.Biol., 23, 2016
2II2
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BU of 2ii2 by Molmil
Crystal Structure of Alpha-11 Giardin
分子名称: Alpha-11 giardin, SULFATE ION
著者Pathuri, P, Nguyen, E.T, Luecke, H.
登録日2006-09-27
公開日2007-04-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Apo and Calcium-bound Crystal Structures of Alpha-11 Giardin, an Unusual Annexin from Giardia lamblia
J.Mol.Biol., 368, 2007
9BIR
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BU of 9bir by Molmil
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cefadroxil
分子名称: Cefadroxil, Solute carrier family 15 member 2, nanobody
著者Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
登録日2024-04-24
公開日2024-07-24
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for antibiotic transport and inhibition in PepT2.
Nat Commun, 15, 2024
2II9
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BU of 2ii9 by Molmil
Anabaena sensory rhodopsin transducer
分子名称: Sensory rhodopsin transducer protein
著者Vogeley, L.
登録日2006-09-27
公開日2007-03-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the anabaena sensory rhodopsin transducer.
J.Mol.Biol., 367, 2007
9B67
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BU of 9b67 by Molmil
GluA2 flip Q in complex with TARPgamma2 at pH8, class1, structure of LBD-TMD-TARPgamma2
分子名称: Isoform Flip of Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T, Greger, I.H.
登録日2024-03-23
公開日2024-07-31
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Proton-triggered rearrangement of the AMPA receptor N-terminal domains impacts receptor kinetics and synaptic localization.
Nat.Struct.Mol.Biol., 31, 2024
5K7G
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BU of 5k7g by Molmil
IRAK4 in complex with AZ3862
分子名称: (3~{a}~{S},7~{a}~{R})-1-methyl-5-[4-[[5-(oxan-4-yl)-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]amino]cyclohexyl]-3,3~{a},4,6,7,7~{a}-hexahydropyrrolo[3,2-c]pyridin-2-one, Interleukin-1 receptor-associated kinase 4, SULFATE ION
著者Ferguson, A.D.
登録日2016-05-26
公開日2017-12-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Discovery and Optimization of Pyrrolopyrimidine Inhibitors of Interleukin-1 Receptor Associated Kinase 4 (IRAK4) for the Treatment of Mutant MYD88L265P Diffuse Large B-Cell Lymphoma.
J. Med. Chem., 60, 2017
9BDN
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BU of 9bdn by Molmil
80S ribosome with angiogenin and tRNAAla
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Korostelev, A.A.
登録日2024-04-12
公開日2024-07-24
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024
9B9O
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BU of 9b9o by Molmil
Crystal structure of FlcD from Pseudomonas aeruginosa bond to iron(II) and substrate
分子名称: (2R)-2-{[(2Z)-2-(hydroxyimino)ethyl]sulfanyl}butanedioic acid, FE (II) ION, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
著者Walker, M.E, Grove, T.L, Li, B, Redinbo, M.R.
登録日2024-04-02
公開日2024-07-31
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural Basis for Methine Excision by a Heme Oxygenase-like Enzyme.
Acs Cent.Sci., 10, 2024
5JRZ
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BU of 5jrz by Molmil
Structure of the NS3 helicase from the French Polynesia strain of the Zika virus
分子名称: ACETATE ION, Helicase, PYROPHOSPHATE 2-
著者Jain, R, Coloma, J, Aggarwal, A.K.
登録日2016-05-06
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structure of the NS3 helicase from Zika virus.
Nat.Struct.Mol.Biol., 23, 2016
9BRX
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BU of 9brx by Molmil
SARS-CoV-2 Papain-like Protease (PLpro) with Fragment 10
分子名称: (4R)-N-(2,4-dimethylphenyl)-7-methyl[1,2,4]triazolo[4,3-a]pyrimidin-5-amine, Papain-like protease nsp3, SULFATE ION, ...
著者Amporndanai, K, Zhao, B, Fesik, S.W.
登録日2024-05-11
公開日2024-07-31
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-Based Screen of SARS-CoV-2 Papain-like Protease (PL pro ).
Acs Med.Chem.Lett., 15, 2024
1LU2
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BU of 1lu2 by Molmil
DOLICHOS BIFLORUS SEED LECTIN IN COMPLEX WITH THE BLOOD GROUP A TRISACCHARIDE
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, LECTIN, ...
著者Hamelryck, T.W, Loris, R, Bouckaert, J, Strecker, G, Imberty, A, Fernandez, E, Wyns, L, Etzler, M.E.
登録日1998-07-30
公開日1998-12-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
J.Mol.Biol., 286, 1999
9BK3
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BU of 9bk3 by Molmil
Crystal structure of Lactate dehydrogenase in complex with 4-((4-(1-methyl-1H-imidazole-2-carbonyl)phenyl)amino)-4-oxo-2-(4-(trifluoromethyl)phenyl)butanoic acid (R-enantiomer, orthorhombic P form)
分子名称: (2R)-4-[4-(1-methyl-1H-imidazole-2-carbonyl)anilino]-4-oxo-2-[4-(trifluoromethyl)phenyl]butanoic acid, CHLORIDE ION, L-lactate dehydrogenase A chain, ...
著者Lovell, S, Cooper, A, Battaile, K.P, Sharma, H.
登録日2024-04-26
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Synthesis and biological characterization of an orally bioavailable lactate dehydrogenase-A inhibitor against pancreatic cancer.
Eur.J.Med.Chem., 275, 2024
9BNR
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BU of 9bnr by Molmil
4-(2-isothiocyanatoethyl)benzenesulfonamide complexed with Macrophage Migration Inhibitory Factor
分子名称: Macrophage migration inhibitory factor, N-[2-(4-sulfamoylphenyl)ethyl]methanethioamide, SULFATE ION
著者Fellner, M, Rutledge, M.T, Putha, L, Kok, L.K, Gamble, A.B, Wilbanks, S.M, Vernall, A.J, Tyndall, J.D.A.
登録日2024-05-02
公開日2024-07-24
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Covalent Isothiocyanate Inhibitors of Macrophage Migration Inhibitory Factor as Potential Colorectal Cancer Treatments.
Chemmedchem, 19, 2024
9B60
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BU of 9b60 by Molmil
GluA2 flip Q in complex with TARPgamma2 at pH8, consensus structure of TMD-TARPgamma2
分子名称: Isoform Flip of Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T, Greger, I.H.
登録日2024-03-23
公開日2024-07-31
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Proton-triggered rearrangement of the AMPA receptor N-terminal domains impacts receptor kinetics and synaptic localization.
Nat.Struct.Mol.Biol., 31, 2024
2IMB
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BU of 2imb by Molmil
Clostridium botulinum Neurotoxin Serotype A Light Chain Inhibited by L-arginine hydroxamate
分子名称: Botulinum neurotoxin A light-chain, N-HYDROXY-L-ARGININAMIDE, ZINC ION
著者Silvaggi, N.R, Allen, K.N.
登録日2006-10-04
公開日2007-06-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structures of Clostridium botulinum Neurotoxin Serotype A Light Chain Complexed with Small-Molecule Inhibitors Highlight Active-Site Flexibility.
Chem.Biol., 14, 2007
2IMT
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BU of 2imt by Molmil
The X-ray Structure of a Bak Homodimer Reveals an Inhibitory Zinc Binding Site
分子名称: Apoptosis regulator BAK, ZINC ION
著者Moldoveanu, T, Liu, Q, Tocilj, A, Watson, M, Shore, G.C, Gehring, K.B.
登録日2006-10-04
公開日2007-01-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献The X-ray structure of a BAK homodimer reveals an inhibitory zinc binding site.
Mol.Cell, 24, 2006
9BCT
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BU of 9bct by Molmil
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 44 nt RNA
分子名称: DNA-directed RNA polymerase subunit A", DNA-directed RNA polymerase subunit A', DNA-directed RNA polymerase subunit B, ...
著者You, L, Ebright, R.H.
登録日2024-04-09
公開日2024-07-31
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural basis of archaeal FttA-dependent transcription termination.
Nature, 635, 2024
5JSP
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BU of 5jsp by Molmil
New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent Dimethylsulfoniopropionate Lyase DddQ
分子名称: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, BROMIDE ION, CHLORIDE ION, ...
著者Brummett, A.E, Dey, M.
登録日2016-05-09
公開日2017-02-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献New Mechanistic Insight from Substrate- and Product-Bound Structures of the Metal-Dependent Dimethylsulfoniopropionate Lyase DddQ.
Biochemistry, 55, 2016
7RTQ
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BU of 7rtq by Molmil
Sterol 14alpha demethylase (CYP51) from Naegleria fowleri in complex with an inhibitor R)-N-(1-(3,4'-difluorobiphenyl-4-yl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
分子名称: N-[(1R)-2-(1H-imidazol-1-yl)-1-(3,4',5-trifluoro[1,1'-biphenyl]-4-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide, PROTOPORPHYRIN IX CONTAINING FE, Protein CYP51
著者Lepesheva, G.I, Hargrove, T.Y, Wawrzak, Z.
登録日2021-08-13
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Relaxed Substrate Requirements of Sterol 14 alpha-Demethylase from Naegleria fowleri Are Accompanied by Resistance to Inhibition.
J.Med.Chem., 64, 2021
9B6A
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BU of 9b6a by Molmil
GluA2 flip Q in complex with TARPgamma2 at pH8, class12, structure of LBD-TMD-TARPgamma2
分子名称: Isoform Flip of Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Nakagawa, T, Greger, I.H.
登録日2024-03-23
公開日2024-07-31
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Proton-triggered rearrangement of the AMPA receptor N-terminal domains impacts receptor kinetics and synaptic localization.
Nat.Struct.Mol.Biol., 31, 2024

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件を2025-07-09に公開中

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